Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is yuiH [H]
Identifier: 159899383
GI number: 159899383
Start: 3634876
End: 3635967
Strand: Direct
Name: yuiH [H]
Synonym: Haur_2864
Alternate gene names: 159899383
Gene position: 3634876-3635967 (Clockwise)
Preceding gene: 159899382
Following gene: 159899384
Centisome position: 57.27
GC content: 53.02
Gene sequence:
>1092_bases ATGCGAGATAGTCTGCCTTCATTTGATGTTGCCAAAAGTGCGACGATGCAGGTGGTTCAGGCCGAGCCATTTAATGCTGG CACACCCTTAGATGAGCTGGCCAGCAGCTACATTCAACCCACCAGCCAATTTTTTGTGCGTACCCATGGCACGATTCCTA GCCTCGACCCTGAAACCACCACAATTCAACTGCAGGGCTTATTGGCTCAACCATTGAGCATCAGCATTGCCGACATTAAG CAACAATTGCCCTATGTTGAGCAGGTTTCGACCTTGCAATGTGCTGGCAACCGCCGCCAAGAGATGCACGCCTACCAGCC AATTTATGGCGAATTGCCCTGGGGGGCCAATGGCTTGAGCACAGCAAATTGGGGTGGTGCACCCTTGCGATCACTGCTAG AGCGCTGCGAGATTGATTCGACTGCCCTGCATTTGGTGTTTGAAAGCTACGATCAGGTTGAGCGCCACGGCCAAACCTTT GGCTATGGCGGCTCGATTCCACTCAACGAGCCGATGATCGAGCATGCCTTGTTGGCCTACACGATGAACGGCACAGCCTT GCCAGCGCTGCATGGTGGCCCGTTACGTTTGGTTATTCCTGGAATTGTTGGTGCTCGCAGCGTCAAATGGTTGCGCTCGA TTGAATTCAGTAGCGAGCCATCACACAACTATTTTCAGCGCCGCGCCTATCGTTTGGCCCAAAGCAGCGAGCCTGAAGCT TGGCAAAACGCGCCAATGTTGCACGAATTGCCAGTTAATGCTGTGCTGTATTTGCCGACAGCTGACCAAACCTTGCTGGC AGGCACGATCACCCTAGCGGGCTATGCGATTACTGGGGGCCAAGCGCTGGTTGAACAGGTCGAAATTTCGCTTGATCACG GCCAACATTGGCAACATGCTCGCTTGATCGACCCACCAAGGCTTGGTTGTTGGAGTCGCTGGCAAATCGAGCTAGAACTG ACGGCGGGTGAATATCAATGTTGGGTTCGCGCCACCGATTCGCTTGGTCAACAACAACCAGAGCAGCCAGCTTGGAATGT CAAAGGCTATCATCACAACGCAATTCAACGAATCCAACTAAGCGTTTGCTAG
Upstream 100 bases:
>100_bases TTAGTCCCTCCGTTGCAGAAAAAATCTAACTATACCAATTCAAAGAACAGTGTTGTTCATGGGTGCTGGTTGCGGCATCC CTAGAAAAGGAGCGATTTCG
Downstream 100 bases:
>100_bases ATCAGCGATCATCGCTAACGATTTTGTTAGTGATGATCAGCGAAATTGCTGCTCTAAATGCGGTTAAATCAACGGCGTTC CTATCAGCGCGTGGTACTAT
Product: sulfite oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MRDSLPSFDVAKSATMQVVQAEPFNAGTPLDELASSYIQPTSQFFVRTHGTIPSLDPETTTIQLQGLLAQPLSISIADIK QQLPYVEQVSTLQCAGNRRQEMHAYQPIYGELPWGANGLSTANWGGAPLRSLLERCEIDSTALHLVFESYDQVERHGQTF GYGGSIPLNEPMIEHALLAYTMNGTALPALHGGPLRLVIPGIVGARSVKWLRSIEFSSEPSHNYFQRRAYRLAQSSEPEA WQNAPMLHELPVNAVLYLPTADQTLLAGTITLAGYAITGGQALVEQVEISLDHGQHWQHARLIDPPRLGCWSRWQIELEL TAGEYQCWVRATDSLGQQQPEQPAWNVKGYHHNAIQRIQLSVC
Sequences:
>Translated_363_residues MRDSLPSFDVAKSATMQVVQAEPFNAGTPLDELASSYIQPTSQFFVRTHGTIPSLDPETTTIQLQGLLAQPLSISIADIK QQLPYVEQVSTLQCAGNRRQEMHAYQPIYGELPWGANGLSTANWGGAPLRSLLERCEIDSTALHLVFESYDQVERHGQTF GYGGSIPLNEPMIEHALLAYTMNGTALPALHGGPLRLVIPGIVGARSVKWLRSIEFSSEPSHNYFQRRAYRLAQSSEPEA WQNAPMLHELPVNAVLYLPTADQTLLAGTITLAGYAITGGQALVEQVEISLDHGQHWQHARLIDPPRLGCWSRWQIELEL TAGEYQCWVRATDSLGQQQPEQPAWNVKGYHHNAIQRIQLSVC >Mature_363_residues MRDSLPSFDVAKSATMQVVQAEPFNAGTPLDELASSYIQPTSQFFVRTHGTIPSLDPETTTIQLQGLLAQPLSISIADIK QQLPYVEQVSTLQCAGNRRQEMHAYQPIYGELPWGANGLSTANWGGAPLRSLLERCEIDSTALHLVFESYDQVERHGQTF GYGGSIPLNEPMIEHALLAYTMNGTALPALHGGPLRLVIPGIVGARSVKWLRSIEFSSEPSHNYFQRRAYRLAQSSEPEA WQNAPMLHELPVNAVLYLPTADQTLLAGTITLAGYAITGGQALVEQVEISLDHGQHWQHARLIDPPRLGCWSRWQIELEL TAGEYQCWVRATDSLGQQQPEQPAWNVKGYHHNAIQRIQLSVC
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=370, Percent_Identity=37.5675675675676, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI74099702, Length=370, Percent_Identity=37.5675675675676, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI74099694, Length=370, Percent_Identity=37.5675675675676, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI71992535, Length=374, Percent_Identity=31.8181818181818, Blast_Score=200, Evalue=9e-52, Organism=Drosophila melanogaster, GI18859905, Length=374, Percent_Identity=30.2139037433155, Blast_Score=166, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 40254; Mature: 40254
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00559 MOLYBDOPTERIN_EUK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSLPSFDVAKSATMQVVQAEPFNAGTPLDELASSYIQPTSQFFVRTHGTIPSLDPETT CCCCCCCCHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCE TIQLQGLLAQPLSISIADIKQQLPYVEQVSTLQCAGNRRQEMHAYQPIYGELPWGANGLS EEEEEEEECCCCEEEHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCC TANWGGAPLRSLLERCEIDSTALHLVFESYDQVERHGQTFGYGGSIPLNEPMIEHALLAY CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEE TMNGTALPALHGGPLRLVIPGIVGARSVKWLRSIEFSSEPSHNYFQRRAYRLAQSSEPEA EECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCH WQNAPMLHELPVNAVLYLPTADQTLLAGTITLAGYAITGGQALVEQVEISLDHGQHWQHA HHCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEECHHHHHHHHHEECCCCCCCCCC RLIDPPRLGCWSRWQIELELTAGEYQCWVRATDSLGQQQPEQPAWNVKGYHHNAIQRIQL CCCCCCCCCCCEEEEEEEEEECCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCEEEEEE SVC ECC >Mature Secondary Structure MRDSLPSFDVAKSATMQVVQAEPFNAGTPLDELASSYIQPTSQFFVRTHGTIPSLDPETT CCCCCCCCHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCE TIQLQGLLAQPLSISIADIKQQLPYVEQVSTLQCAGNRRQEMHAYQPIYGELPWGANGLS EEEEEEEECCCCEEEHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCC TANWGGAPLRSLLERCEIDSTALHLVFESYDQVERHGQTFGYGGSIPLNEPMIEHALLAY CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEE TMNGTALPALHGGPLRLVIPGIVGARSVKWLRSIEFSSEPSHNYFQRRAYRLAQSSEPEA EECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCH WQNAPMLHELPVNAVLYLPTADQTLLAGTITLAGYAITGGQALVEQVEISLDHGQHWQHA HHCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEECHHHHHHHHHEECCCCCCCCCC RLIDPPRLGCWSRWQIELELTAGEYQCWVRATDSLGQQQPEQPAWNVKGYHHNAIQRIQL CCCCCCCCCCCEEEEEEEEEECCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCEEEEEE SVC ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]