Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is yajO [H]
Identifier: 159899367
GI number: 159899367
Start: 3612794
End: 3613729
Strand: Direct
Name: yajO [H]
Synonym: Haur_2848
Alternate gene names: 159899367
Gene position: 3612794-3613729 (Clockwise)
Preceding gene: 159899366
Following gene: 159899368
Centisome position: 56.92
GC content: 47.54
Gene sequence:
>936_bases ATGCAATTACGTCAACTCGGTAAGTCGGAATTACGGATTCCTAAAGTAGTGATTGGGGGCAATGTATTTGGCTGGACGGT TGATCGCGCCCAAACATTTCGTTTGCTTGATGCCTTTGTTGCTGCAGGGCTTAACACAATTGATACTGCCGATGTTTATT CGGCATGGGTCGAAGGTAACCAAGGTGGCGAATCGGAAACGCTGATTGGAGAATGGATTAAGCAACGCCAGCGTCGCGAT GATTTGATTATTCTGAGCAAAGTTGGAGCTGGCACAGGTTTAGCCAAGGCGCATATTGCCCAGGCAATCGATGCCTCATT ACAACGGCTTCAAACTGACTATCTTGATTTATATCAAGCGCATGTTGATGATGCCAATACTCCGTTAGATCAAACGCTTA GCGCATTTGCCGAGCTAATCCAACAAGGCAAAATACGCGTGATTGGGGCATCGAACTATAGCGCTGAACGACTACAAGCT GCCTTAGCAATCAGCCAAGAGCTGAATATACCACGCTATGAAAGCCTTCAACCGCTATACAACCTATACGATCGTGAAGC ATACGAAGCACAGTTAGAAACAGTTTGCCAAGAAGCAGATTTGGGTGTTATTCCCTATTCAACCTTAGCATCAGGCTTTT TAACCGGCAAATACCGTAGCGAAGCCGATTTGAGCCAAAGCGCCCGTGGTTCGCGAGTGCGGAGCTATCTCAATCCACGT GGCTGGATTATTCTTAAGGCGCTTGATGAGGTGGCGGCTGAAGTTCAAGCGACACCTGGCCAAGTTGCCTTAGCGTGGCA AATTGCCCGTCCTAGCATCACCGCGCCAATTGCTAGTGCCACCAACCTCGATCAAGTCAACGATCTGATTAAGGCGGCCC AACTTGAATTAACCTCAAGCATGATTGATTATTTAAACCAAGCTAGCCAAGCCTAA
Upstream 100 bases:
>100_bases AACTGGCGTGATACCGTATGACTTCAGATATCTCTAGTGATACCATGCTAGTACATCGTTCATCCAGCAACCATGCTGTG GGTCTAGAAGGAATCGTACT
Downstream 100 bases:
>100_bases TTAGTTAACTACGCTGCATTGCTAGACTGTCAACAGTTAACGACATGTCTAGCAACAGCACATGCAGTAATTAGCAGCTT TGGCGATATCAATGATTGGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MQLRQLGKSELRIPKVVIGGNVFGWTVDRAQTFRLLDAFVAAGLNTIDTADVYSAWVEGNQGGESETLIGEWIKQRQRRD DLIILSKVGAGTGLAKAHIAQAIDASLQRLQTDYLDLYQAHVDDANTPLDQTLSAFAELIQQGKIRVIGASNYSAERLQA ALAISQELNIPRYESLQPLYNLYDREAYEAQLETVCQEADLGVIPYSTLASGFLTGKYRSEADLSQSARGSRVRSYLNPR GWIILKALDEVAAEVQATPGQVALAWQIARPSITAPIASATNLDQVNDLIKAAQLELTSSMIDYLNQASQA
Sequences:
>Translated_311_residues MQLRQLGKSELRIPKVVIGGNVFGWTVDRAQTFRLLDAFVAAGLNTIDTADVYSAWVEGNQGGESETLIGEWIKQRQRRD DLIILSKVGAGTGLAKAHIAQAIDASLQRLQTDYLDLYQAHVDDANTPLDQTLSAFAELIQQGKIRVIGASNYSAERLQA ALAISQELNIPRYESLQPLYNLYDREAYEAQLETVCQEADLGVIPYSTLASGFLTGKYRSEADLSQSARGSRVRSYLNPR GWIILKALDEVAAEVQATPGQVALAWQIARPSITAPIASATNLDQVNDLIKAAQLELTSSMIDYLNQASQA >Mature_311_residues MQLRQLGKSELRIPKVVIGGNVFGWTVDRAQTFRLLDAFVAAGLNTIDTADVYSAWVEGNQGGESETLIGEWIKQRQRRD DLIILSKVGAGTGLAKAHIAQAIDASLQRLQTDYLDLYQAHVDDANTPLDQTLSAFAELIQQGKIRVIGASNYSAERLQA ALAISQELNIPRYESLQPLYNLYDREAYEAQLETVCQEADLGVIPYSTLASGFLTGKYRSEADLSQSARGSRVRSYLNPR GWIILKALDEVAAEVQATPGQVALAWQIARPSITAPIASATNLDQVNDLIKAAQLELTSSMIDYLNQASQA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=30.1538461538462, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI4504825, Length=322, Percent_Identity=30.1242236024845, Blast_Score=138, Evalue=5e-33, Organism=Homo sapiens, GI27436964, Length=327, Percent_Identity=29.3577981651376, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI27436962, Length=327, Percent_Identity=29.3577981651376, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI27436966, Length=327, Percent_Identity=29.3577981651376, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI27436971, Length=310, Percent_Identity=27.0967741935484, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI41152114, Length=221, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI223718702, Length=222, Percent_Identity=29.2792792792793, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI41327764, Length=330, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI223718708, Length=155, Percent_Identity=31.6129032258064, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87081735, Length=316, Percent_Identity=32.5949367088608, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI1789199, Length=332, Percent_Identity=31.3253012048193, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1789375, Length=313, Percent_Identity=30.6709265175719, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=27.639751552795, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1788081, Length=276, Percent_Identity=29.3478260869565, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI48994888, Length=296, Percent_Identity=27.3648648648649, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=26.4094955489614, Blast_Score=108, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6323998, Length=333, Percent_Identity=24.9249249249249, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6319958, Length=298, Percent_Identity=26.510067114094, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6319951, Length=308, Percent_Identity=24.025974025974, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321052, Length=165, Percent_Identity=32.1212121212121, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24640980, Length=335, Percent_Identity=25.0746268656716, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI45549126, Length=335, Percent_Identity=25.0746268656716, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24646159, Length=225, Percent_Identity=28.8888888888889, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34041; Mature: 34041
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRQLGKSELRIPKVVIGGNVFGWTVDRAQTFRLLDAFVAAGLNTIDTADVYSAWVEGN CCHHHCCHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC QGGESETLIGEWIKQRQRRDDLIILSKVGAGTGLAKAHIAQAIDASLQRLQTDYLDLYQA CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HVDDANTPLDQTLSAFAELIQQGKIRVIGASNYSAERLQAALAISQELNIPRYESLQPLY HCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH NLYDREAYEAQLETVCQEADLGVIPYSTLASGFLTGKYRSEADLSQSARGSRVRSYLNPR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC GWIILKALDEVAAEVQATPGQVALAWQIARPSITAPIASATNLDQVNDLIKAAQLELTSS CEEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MIDYLNQASQA HHHHHHHHCCC >Mature Secondary Structure MQLRQLGKSELRIPKVVIGGNVFGWTVDRAQTFRLLDAFVAAGLNTIDTADVYSAWVEGN CCHHHCCHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC QGGESETLIGEWIKQRQRRDDLIILSKVGAGTGLAKAHIAQAIDASLQRLQTDYLDLYQA CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HVDDANTPLDQTLSAFAELIQQGKIRVIGASNYSAERLQAALAISQELNIPRYESLQPLY HCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH NLYDREAYEAQLETVCQEADLGVIPYSTLASGFLTGKYRSEADLSQSARGSRVRSYLNPR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC GWIILKALDEVAAEVQATPGQVALAWQIARPSITAPIASATNLDQVNDLIKAAQLELTSS CEEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MIDYLNQASQA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]