Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899353
Identifier: 159899353
GI number: 159899353
Start: 3602964
End: 3603626
Strand: Direct
Name: 159899353
Synonym: Haur_2834
Alternate gene names: NA
Gene position: 3602964-3603626 (Clockwise)
Preceding gene: 159899351
Following gene: 159899354
Centisome position: 56.77
GC content: 47.21
Gene sequence:
>663_bases ATGATCGATTTTAAAACAGTGGGCTGGCAAAAACTCACTGAAACCACCAAGCAGGTGCACATTCGTCCGCTCGATTCGTT TGGTGAATTAAAGCAAGTGTTGGATTTACGCTATCGCGGCTATGGTCATTTTGCTGCACCCGATCAAGCGCTTGATATGC TCGATTTGGCTGATCATAGTTTAATCCTGGTGGCCGAATTAGCCAATCGCGGCATTGTCGGCACGCTGCGGCTGATCGAT GGTGGGCCTGGCAAGATTGAGCTAGAGCAATTTGTGCCGATCACCACGATTCCCCAATTACATCAGCGCTCGTTTGTCGA GGCAACCCGCTTTACGATTCGCCATTGCCGCGAATTATTGGCAGTTAAGCTGCTTTTATGCAAGGCTTTGTGGATGTATG CGCTGCAACAAGGCCATGAACATGTAGTAATTTCTTCGACCCAGCGCTTGGCAAAATTCTATCGGATGTTGATGTTCGAG GATATTGGCTCGGCGGGAATCTATCAACATCCACGCCTTGGCCAAAGCGAACATCGAACGTTTATTTTGCCAGTGCATAC GGCTTTAGATCGTTATCGTGAAATGCAACACCCGTTGTATGCGTTTATGCAACAGCCTCAACCGAATATTAGTTTGCGTC CAAGCAATAATCGCTATAATTAA
Upstream 100 bases:
>100_bases CTACTAAGGGTAAAATCAAGACTAAAGTCCTACTAGCATTTAGATAGCTAGGCTTGATGATTATTTTTACTGGTATTTAA TGTTTTGCTGTGAGGATGGC
Downstream 100 bases:
>100_bases TCGCGATACCTTCCAAATTGGAGCAAATCTATGATTCTTTCGGGAACCCGCCCAGCCGTGATTCAGGCTGTTCAAGCAGT CAGTTTACATGGCAGCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MIDFKTVGWQKLTETTKQVHIRPLDSFGELKQVLDLRYRGYGHFAAPDQALDMLDLADHSLILVAELANRGIVGTLRLID GGPGKIELEQFVPITTIPQLHQRSFVEATRFTIRHCRELLAVKLLLCKALWMYALQQGHEHVVISSTQRLAKFYRMLMFE DIGSAGIYQHPRLGQSEHRTFILPVHTALDRYREMQHPLYAFMQQPQPNISLRPSNNRYN
Sequences:
>Translated_220_residues MIDFKTVGWQKLTETTKQVHIRPLDSFGELKQVLDLRYRGYGHFAAPDQALDMLDLADHSLILVAELANRGIVGTLRLID GGPGKIELEQFVPITTIPQLHQRSFVEATRFTIRHCRELLAVKLLLCKALWMYALQQGHEHVVISSTQRLAKFYRMLMFE DIGSAGIYQHPRLGQSEHRTFILPVHTALDRYREMQHPLYAFMQQPQPNISLRPSNNRYN >Mature_220_residues MIDFKTVGWQKLTETTKQVHIRPLDSFGELKQVLDLRYRGYGHFAAPDQALDMLDLADHSLILVAELANRGIVGTLRLID GGPGKIELEQFVPITTIPQLHQRSFVEATRFTIRHCRELLAVKLLLCKALWMYALQQGHEHVVISSTQRLAKFYRMLMFE DIGSAGIYQHPRLGQSEHRTFILPVHTALDRYREMQHPLYAFMQQPQPNISLRPSNNRYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25432; Mature: 25432
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFKTVGWQKLTETTKQVHIRPLDSFGELKQVLDLRYRGYGHFAAPDQALDMLDLADHS CCCCCCCCHHHHHHHHHHEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC LILVAELANRGIVGTLRLIDGGPGKIELEQFVPITTIPQLHQRSFVEATRFTIRHCRELL EEEEEHHHCCCCEEEEEEEECCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVKLLLCKALWMYALQQGHEHVVISSTQRLAKFYRMLMFEDIGSAGIYQHPRLGQSEHRT HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE FILPVHTALDRYREMQHPLYAFMQQPQPNISLRPSNNRYN EEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC >Mature Secondary Structure MIDFKTVGWQKLTETTKQVHIRPLDSFGELKQVLDLRYRGYGHFAAPDQALDMLDLADHS CCCCCCCCHHHHHHHHHHEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC LILVAELANRGIVGTLRLIDGGPGKIELEQFVPITTIPQLHQRSFVEATRFTIRHCRELL EEEEEHHHCCCCEEEEEEEECCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVKLLLCKALWMYALQQGHEHVVISSTQRLAKFYRMLMFEDIGSAGIYQHPRLGQSEHRT HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE FILPVHTALDRYREMQHPLYAFMQQPQPNISLRPSNNRYN EEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA