Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899254
Identifier: 159899254
GI number: 159899254
Start: 3492649
End: 3493563
Strand: Direct
Name: 159899254
Synonym: Haur_2735
Alternate gene names: NA
Gene position: 3492649-3493563 (Clockwise)
Preceding gene: 159899253
Following gene: 159899255
Centisome position: 55.03
GC content: 48.42
Gene sequence:
>915_bases ATGCCAGAACCAATTCAACCAACCACACCATTGACCCCACCAGCAAATCCCGAGCAACCAGTCGCAACCAACGTACTTCA GCCGCAAGTAACTCAAGTGCTGGATTCCTCGACTCAAGCGTTGCCGCCTAATCCAAGCTATGGGCAATCGCCCCAAGCCT ATGGCTATCAACAGCCAACACAATACGGGCAACAACAAGGCTATGGTCAGCCTCAACCGCCCTATGGCCAACAACCAGCC TATTATCAACAACCGCCCCAAGCCTATGGCTATCAGCAACAGCCAGTGGCCTATGGCAATCCAGCCTATATGGGGCCACC GCCAATCATTAGCGATATTAATGCGCCTGATCGTGGGCTGCGCTGGGTTGGCATGAACGTACTAGGCTTTTTTGTGGCTT CAATGAGCTTCTTGAGTTTATTTTTTGGTCTAGCCATGGTTGTCGCCGCATCCTATGTCGATTCAAATTCAAACTTTGAA AATATTGAGAATATTGCCAATGCCGATATTCTCGTATTATTCGGCTATGGGGTCTGTGCAGCACTTACCGCAGCAATCGT GGCCTTAATTCAGCGCGGAGCCTTACATAATAAAGTTTCGCTCTGGCCATGGATTGGCAAAACGGCCTTGGCTGTAGGCA TTTTATTACCATTAAGCACCTTTCTCAGCGGCACAGTAATTAATATGCTAGAGCCTGCCGAATCAAATGCTTGGATGTTT ATCGTTTTAGCCACGCTTATTTTTGGCATAACCTCGTTTGGCACGGCCTTCGTGCAATATCTTGAGGTTAAGGAAGTCGC CAATCGTCCGATGCAATGGGTGATTACGACTGGCCTAACCTGGACAATTCTCGGTGGGTTAGTTTTAGGTGGCTTGTTTG GCTTCTTTGCGATGGCGATTGAGGGTCAGATCTAA
Upstream 100 bases:
>100_bases GTCACAGCTTGGCGTTAGTGCTACAATCTTTAGCATCTATTTGCCAACTCAGCACTGAGCGTTCTTATAATGCCCAGTGG TCTTATCAGGAGCTAGGTTT
Downstream 100 bases:
>100_bases GCCTGTTATCGTTGGCTCGCTCTAACTAACTCATTTTGATACAATGTTGATCTCACACGATTTGATCTTGATAGCATCTT GATTGGTAGTTAAGGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPEPIQPTTPLTPPANPEQPVATNVLQPQVTQVLDSSTQALPPNPSYGQSPQAYGYQQPTQYGQQQGYGQPQPPYGQQPA YYQQPPQAYGYQQQPVAYGNPAYMGPPPIISDINAPDRGLRWVGMNVLGFFVASMSFLSLFFGLAMVVAASYVDSNSNFE NIENIANADILVLFGYGVCAALTAAIVALIQRGALHNKVSLWPWIGKTALAVGILLPLSTFLSGTVINMLEPAESNAWMF IVLATLIFGITSFGTAFVQYLEVKEVANRPMQWVITTGLTWTILGGLVLGGLFGFFAMAIEGQI
Sequences:
>Translated_304_residues MPEPIQPTTPLTPPANPEQPVATNVLQPQVTQVLDSSTQALPPNPSYGQSPQAYGYQQPTQYGQQQGYGQPQPPYGQQPA YYQQPPQAYGYQQQPVAYGNPAYMGPPPIISDINAPDRGLRWVGMNVLGFFVASMSFLSLFFGLAMVVAASYVDSNSNFE NIENIANADILVLFGYGVCAALTAAIVALIQRGALHNKVSLWPWIGKTALAVGILLPLSTFLSGTVINMLEPAESNAWMF IVLATLIFGITSFGTAFVQYLEVKEVANRPMQWVITTGLTWTILGGLVLGGLFGFFAMAIEGQI >Mature_303_residues PEPIQPTTPLTPPANPEQPVATNVLQPQVTQVLDSSTQALPPNPSYGQSPQAYGYQQPTQYGQQQGYGQPQPPYGQQPAY YQQPPQAYGYQQQPVAYGNPAYMGPPPIISDINAPDRGLRWVGMNVLGFFVASMSFLSLFFGLAMVVAASYVDSNSNFEN IENIANADILVLFGYGVCAALTAAIVALIQRGALHNKVSLWPWIGKTALAVGILLPLSTFLSGTVINMLEPAESNAWMFI VLATLIFGITSFGTAFVQYLEVKEVANRPMQWVITTGLTWTILGGLVLGGLFGFFAMAIEGQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32826; Mature: 32695
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPIQPTTPLTPPANPEQPVATNVLQPQVTQVLDSSTQALPPNPSYGQSPQAYGYQQPT CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH QYGQQQGYGQPQPPYGQQPAYYQQPPQAYGYQQQPVAYGNPAYMGPPPIISDINAPDRGL HHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RWVGMNVLGFFVASMSFLSLFFGLAMVVAASYVDSNSNFENIENIANADILVLFGYGVCA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHH ALTAAIVALIQRGALHNKVSLWPWIGKTALAVGILLPLSTFLSGTVINMLEPAESNAWMF HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH IVLATLIFGITSFGTAFVQYLEVKEVANRPMQWVITTGLTWTILGGLVLGGLFGFFAMAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH EGQI CCCC >Mature Secondary Structure PEPIQPTTPLTPPANPEQPVATNVLQPQVTQVLDSSTQALPPNPSYGQSPQAYGYQQPT CCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH QYGQQQGYGQPQPPYGQQPAYYQQPPQAYGYQQQPVAYGNPAYMGPPPIISDINAPDRGL HHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RWVGMNVLGFFVASMSFLSLFFGLAMVVAASYVDSNSNFENIENIANADILVLFGYGVCA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHH ALTAAIVALIQRGALHNKVSLWPWIGKTALAVGILLPLSTFLSGTVINMLEPAESNAWMF HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH IVLATLIFGITSFGTAFVQYLEVKEVANRPMQWVITTGLTWTILGGLVLGGLFGFFAMAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH EGQI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA