Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899242
Identifier: 159899242
GI number: 159899242
Start: 3478673
End: 3479443
Strand: Direct
Name: 159899242
Synonym: Haur_2723
Alternate gene names: NA
Gene position: 3478673-3479443 (Clockwise)
Preceding gene: 159899241
Following gene: 159899243
Centisome position: 54.81
GC content: 52.4
Gene sequence:
>771_bases ATGTCGGAACAACCCGATGAATTAGATTATCGTCCGCTGCCCTCGCGGCGTGGCAATCCCACAATTAAACCCATTGATGT GGAACGAGCAGTGCGTTGGCGCTGGCTAAATGGCTGGTTAGTGTTGGTCATTACAACTGCACTAGTAATTAGCGGAACTG GCGGCTTAATTTGGCTCAATACTCGTCCGCCAGCTGAGACCGCCCCGCAACAAATGCCGCTCTTTGCCTCGACGATTTTG AGCGAAATTAGCGACCCAAATGTGCGCGATCAACTGCTGGCGCTTGATGCGAGCACTATCCAAGCCCAAAGTGTGATCAA CCAAAACCCGCGTGATCCGAATGGCTGGATTATGCTCGGCCATGCCCATTATGATTTTATTCAGATGATTTATGAGCATG CCCCCAACGGCCAAGCCTATGTGCAAAACCTCAGCCGTTGGATTCAAGCCAGCGATGCCTATTCGCAAGCCTTGGCCTTG GATACCTTCCAACCGCTGATTCGTTCGGATCGGGCGGTGGCCTTGGCACGCTATGGGATTGGCTTTGGCAACCCCTTTTA TAGTGAACAAGCCCTCGCAGAAGCTGAAACCGCCTTGTCCCAAGATGATCAGACCTTGCTGGTGTTGCTGAATGTGGGGC GCGTGTATGCCTTATTGCCTGAACCACGCATGGCTGATGCCGAGCGTTTATGGCGAAAAGTTATTGAACTTGGCCCAACC AGTTTGCAGGCCAAATTAGCCCAAAGCCTGCTTGATGGAGCCAAGCCCTAG
Upstream 100 bases:
>100_bases GGCAGGGGTGAGGGAAAGCAAAAACCATTACAACTTAATCGATCATAACCGCTGCGGATGCAGGCAACGTTTGCATCTGT AGCTAGCGAGTTTAAACAGA
Downstream 100 bases:
>100_bases GAGCAATCATCATGACCAGCGAATCTGAAACTAGCGCCAAGCAAGGCCTTTCACGCAAAGAATGGCTTTGGCTCGGCGCA GGCATTGTCGTGGCAATTAT
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSEQPDELDYRPLPSRRGNPTIKPIDVERAVRWRWLNGWLVLVITTALVISGTGGLIWLNTRPPAETAPQQMPLFASTIL SEISDPNVRDQLLALDASTIQAQSVINQNPRDPNGWIMLGHAHYDFIQMIYEHAPNGQAYVQNLSRWIQASDAYSQALAL DTFQPLIRSDRAVALARYGIGFGNPFYSEQALAEAETALSQDDQTLLVLLNVGRVYALLPEPRMADAERLWRKVIELGPT SLQAKLAQSLLDGAKP
Sequences:
>Translated_256_residues MSEQPDELDYRPLPSRRGNPTIKPIDVERAVRWRWLNGWLVLVITTALVISGTGGLIWLNTRPPAETAPQQMPLFASTIL SEISDPNVRDQLLALDASTIQAQSVINQNPRDPNGWIMLGHAHYDFIQMIYEHAPNGQAYVQNLSRWIQASDAYSQALAL DTFQPLIRSDRAVALARYGIGFGNPFYSEQALAEAETALSQDDQTLLVLLNVGRVYALLPEPRMADAERLWRKVIELGPT SLQAKLAQSLLDGAKP >Mature_255_residues SEQPDELDYRPLPSRRGNPTIKPIDVERAVRWRWLNGWLVLVITTALVISGTGGLIWLNTRPPAETAPQQMPLFASTILS EISDPNVRDQLLALDASTIQAQSVINQNPRDPNGWIMLGHAHYDFIQMIYEHAPNGQAYVQNLSRWIQASDAYSQALALD TFQPLIRSDRAVALARYGIGFGNPFYSEQALAEAETALSQDDQTLLVLLNVGRVYALLPEPRMADAERLWRKVIELGPTS LQAKLAQSLLDGAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28510; Mature: 28379
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQPDELDYRPLPSRRGNPTIKPIDVERAVRWRWLNGWLVLVITTALVISGTGGLIWLN CCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHEEHHCCHHHHHHHHHHHHCCCCCEEEEC TRPPAETAPQQMPLFASTILSEISDPNVRDQLLALDASTIQAQSVINQNPRDPNGWIMLG CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE HAHYDFIQMIYEHAPNGQAYVQNLSRWIQASDAYSQALALDTFQPLIRSDRAVALARYGI CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC GFGNPFYSEQALAEAETALSQDDQTLLVLLNVGRVYALLPEPRMADAERLWRKVIELGPT CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHCCCC SLQAKLAQSLLDGAKP HHHHHHHHHHHCCCCC >Mature Secondary Structure SEQPDELDYRPLPSRRGNPTIKPIDVERAVRWRWLNGWLVLVITTALVISGTGGLIWLN CCCCCCCCCCCCCCCCCCCCCCEECHHHHHHEEHHCCHHHHHHHHHHHHCCCCCEEEEC TRPPAETAPQQMPLFASTILSEISDPNVRDQLLALDASTIQAQSVINQNPRDPNGWIMLG CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE HAHYDFIQMIYEHAPNGQAYVQNLSRWIQASDAYSQALALDTFQPLIRSDRAVALARYGI CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC GFGNPFYSEQALAEAETALSQDDQTLLVLLNVGRVYALLPEPRMADAERLWRKVIELGPT CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHCCCC SLQAKLAQSLLDGAKP HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA