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The map label for this gene is 159898379

Identifier: 159898379

GI number: 159898379

Start: 2156362

End: 2158857

Strand: Reverse

Name: 159898379

Synonym: Haur_1855

Alternate gene names: NA

Gene position: 2158857-2156362 (Counterclockwise)

Preceding gene: 159898390

Following gene: 159898377

Centisome position: 34.02

GC content: 49.52

Gene sequence:

>2496_bases
ATGAAGCAGCGCCAAGCGTTTGCTGCATGGCTCCGTCATGTACGCCATGAATTACAATATAGTCAAGACCAATTTGCCGA
ACAACTTAACTATGCCACGGTGACCTACCGCAAGGTTGAGCGTGGTTTAGCACCATCGGCAGCATTTTTAGAGCGGTTGG
CCATGGTGCTTGAGTTACCAGCCAGCGATATGCGGATCTTGCACGACTTCGCCAACTCCGACACCGCGCTGCAAGCACTC
TCGTTGCCAGATCATCTGGAGCATCTTCAGCCGCAGGTAGCCCAGGCCAAGCCAGCAATTGCCGCTACGCCGCATACCTT
GCCAATGTTGCCCTACCCGTTAATTGGCCGTGAACGCGAGGTTGAAACGCTTACCAAGTTGTTACAGCACCCGCAACATC
GCTTGATTACCGTGATCGGCCCGCCTGGGGTTGGCAAAACGCGGGTCGCTCAGGCCGTTGGTTGGGCCAGCCTCGGCCAT
TTTTGCGATGGAATTTGGTATGTTGAAGGCATTCAATGCACCACAATTGCCGATTTTTGGGTCGATATTGCCAATATGCT
CGGGCGTTCGGCCAATAGCTCCATGACCTTAATCGAGCAAATTAGTGCATTAATCGGCCAAAAAAATAGCTTGCTGATTT
TAGATAATTGCGAGCATTTGAGCGAAATTAATCTTGGTTTAGCCCAGTTATTGGCGCAATGCAGCGGCTTGAAAATCTTG
GTAACCTCACGGACAAGCCTAAAACTCCGGATCGAACATCTTTTTTGGCTGCATCCTTTTCCTACGCCCGACCCGCAAAG
CAGCAATCTGAGTGCGATTTGGCAGAACCCAGCGGTACAACTTTTTTGCCAGCGTGCCCAAGCTAGTAACCATGAGTGGC
AAATCAACGATAGCCAAGCAGCAACCATCGCCCAAATTTGCCAACATCTTGATGGCTTGCCCTTGGTGATCGAATTGGCG
GCAGTACGCACCCAATTTGTTACGCCAACCACGCTACTGGCACGGTTAAGCAATCGATTAGGCATCTTAACCAACACCAT
GCGCGATGCTCCGGCGCATCAAAGCACCCTGCGACGCACACTTGAATGGAGCTATCAACTGCTTGATAGCAACGAACAAC
AGATCTTTGCGCGGCTCAGTGTTTTTGCAACCGATAGCGATTTCGAGGCGATTGTGGCGGTTTGCGCCGATTTGGCACCA
TCGAACGATGATATTTTTGATTGTATGGCCAGCCTCGTTGCCAAAAGTCTGGTTATTCATCGACCCGACCCTCAAGGCAA
TTCACGCTTTGGCATGTTGGCGACAATTCGTGAGTTTGCGGCGAGTTTGTTAGCTGAGCAACAACAAACGCATCATTATA
CCCAACGCTATATTAATTATTACATTGAACTCGCCGAAAAAATTGATCGCGAACTGCGCGGCAAAGAGCAAATTCAGCTG
CTCGAGCAGCTTGAGTCGGAGTTTCATCATTGGCAAGCGGTTTTACGTTTATGCCTCAATCAACAACAGTATCATGGCTT
TTTACGGCTGTTTGCAGCACTGAGCCAATTTTGGTATGGTCATGGCCATTTTATGGAGGCTTGGCAATGGCTCAGCGCAG
TCGATCAAGCGTTAAATCACGTCGATTCGCCCATTATTCAAGCGCGGGCGGCTCTAGGCGCAGGCATTGTAACCAATATT
CATCATTGCCTTGATCTCCCGTTGGGCTATCTCGAACGCGCCCTCGATTTATGTCAACAATTGAATGATCAACAGGGGAT
TGCCACATGTTACTTGTTGCTTGGGTTGATTATGATGCGCAAACATCAATATGTGCAAGCAACCCGCTGGCTCAACCAAA
GCCTTAATTATTTTGAGTCGAGCGTTGAGTATTGGCTTTTGAGCATTAATCATTTGCTGCTGGCTCAATTAAATATCTAT
CTCAACGATCTTGATCAAGCTAGCCGCTACCTTGATTTGGTGGGGCATTCGCCACAACTCCGGCTTGATCCCTTCCGATC
ATCGTGGTATCAATCATTACAAGGCCATGTTGCCTTCTACAAACGCTGCTACACCGAAGCACTGACGTGGCATCAACAGA
GTTTGGTCGAGCGCCAGCAGCTCGGCATCAAAGGTGATATTGCGGTTTCTTGGCTGCGGATTGCTCAAACCGAGCGAGCT
TTAGGCCACTATCAACCAACCCGCAACGCCCTCGAACAAAGCCTCAAGCTCTGGCAAATGCACGACAATCAAGAAAACGT
CTTGCATTGTTTAGAAGAATTTGCCGCGCTACTGGCCTATGATCAACAGCATCAGACCGCCACCTATCTGCTGAGCTATG
CATGGTTTCAACGTGAACAACGTCAATTGCCCCATCCACCAATCGATCAGGCGCGATCGCAGCAATTTGGCATGTGGCTG
CAAAACCAACAACCAAGCAATGTCTGGCGCGAAGCTTGGAGTTACGGCCAAACACTCAAACTTGATCAAGTGATTGGCTT
TGTGCTCGCGGGGTAG

Upstream 100 bases:

>100_bases
TCGTAATTGGTAGTTCCCACCAATGGCCGATTACTGGATTTCTTCCAAGGCACAGCGTTGATGGGTAGAATGCAGAATTC
ACTCAGGAGGCAGAAATGCG

Downstream 100 bases:

>100_bases
AAACGAACCCAGCCCACATTTATTGGTTTCGTTCTATTGATTCCGCCACGTCGAATTTGCTAAAGTTCCGCCGATCAGCG
TTTCCAGGGTTGCAAAGGGG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 831; Mature: 831

Protein sequence:

>831_residues
MKQRQAFAAWLRHVRHELQYSQDQFAEQLNYATVTYRKVERGLAPSAAFLERLAMVLELPASDMRILHDFANSDTALQAL
SLPDHLEHLQPQVAQAKPAIAATPHTLPMLPYPLIGREREVETLTKLLQHPQHRLITVIGPPGVGKTRVAQAVGWASLGH
FCDGIWYVEGIQCTTIADFWVDIANMLGRSANSSMTLIEQISALIGQKNSLLILDNCEHLSEINLGLAQLLAQCSGLKIL
VTSRTSLKLRIEHLFWLHPFPTPDPQSSNLSAIWQNPAVQLFCQRAQASNHEWQINDSQAATIAQICQHLDGLPLVIELA
AVRTQFVTPTTLLARLSNRLGILTNTMRDAPAHQSTLRRTLEWSYQLLDSNEQQIFARLSVFATDSDFEAIVAVCADLAP
SNDDIFDCMASLVAKSLVIHRPDPQGNSRFGMLATIREFAASLLAEQQQTHHYTQRYINYYIELAEKIDRELRGKEQIQL
LEQLESEFHHWQAVLRLCLNQQQYHGFLRLFAALSQFWYGHGHFMEAWQWLSAVDQALNHVDSPIIQARAALGAGIVTNI
HHCLDLPLGYLERALDLCQQLNDQQGIATCYLLLGLIMMRKHQYVQATRWLNQSLNYFESSVEYWLLSINHLLLAQLNIY
LNDLDQASRYLDLVGHSPQLRLDPFRSSWYQSLQGHVAFYKRCYTEALTWHQQSLVERQQLGIKGDIAVSWLRIAQTERA
LGHYQPTRNALEQSLKLWQMHDNQENVLHCLEEFAALLAYDQQHQTATYLLSYAWFQREQRQLPHPPIDQARSQQFGMWL
QNQQPSNVWREAWSYGQTLKLDQVIGFVLAG

Sequences:

>Translated_831_residues
MKQRQAFAAWLRHVRHELQYSQDQFAEQLNYATVTYRKVERGLAPSAAFLERLAMVLELPASDMRILHDFANSDTALQAL
SLPDHLEHLQPQVAQAKPAIAATPHTLPMLPYPLIGREREVETLTKLLQHPQHRLITVIGPPGVGKTRVAQAVGWASLGH
FCDGIWYVEGIQCTTIADFWVDIANMLGRSANSSMTLIEQISALIGQKNSLLILDNCEHLSEINLGLAQLLAQCSGLKIL
VTSRTSLKLRIEHLFWLHPFPTPDPQSSNLSAIWQNPAVQLFCQRAQASNHEWQINDSQAATIAQICQHLDGLPLVIELA
AVRTQFVTPTTLLARLSNRLGILTNTMRDAPAHQSTLRRTLEWSYQLLDSNEQQIFARLSVFATDSDFEAIVAVCADLAP
SNDDIFDCMASLVAKSLVIHRPDPQGNSRFGMLATIREFAASLLAEQQQTHHYTQRYINYYIELAEKIDRELRGKEQIQL
LEQLESEFHHWQAVLRLCLNQQQYHGFLRLFAALSQFWYGHGHFMEAWQWLSAVDQALNHVDSPIIQARAALGAGIVTNI
HHCLDLPLGYLERALDLCQQLNDQQGIATCYLLLGLIMMRKHQYVQATRWLNQSLNYFESSVEYWLLSINHLLLAQLNIY
LNDLDQASRYLDLVGHSPQLRLDPFRSSWYQSLQGHVAFYKRCYTEALTWHQQSLVERQQLGIKGDIAVSWLRIAQTERA
LGHYQPTRNALEQSLKLWQMHDNQENVLHCLEEFAALLAYDQQHQTATYLLSYAWFQREQRQLPHPPIDQARSQQFGMWL
QNQQPSNVWREAWSYGQTLKLDQVIGFVLAG
>Mature_831_residues
MKQRQAFAAWLRHVRHELQYSQDQFAEQLNYATVTYRKVERGLAPSAAFLERLAMVLELPASDMRILHDFANSDTALQAL
SLPDHLEHLQPQVAQAKPAIAATPHTLPMLPYPLIGREREVETLTKLLQHPQHRLITVIGPPGVGKTRVAQAVGWASLGH
FCDGIWYVEGIQCTTIADFWVDIANMLGRSANSSMTLIEQISALIGQKNSLLILDNCEHLSEINLGLAQLLAQCSGLKIL
VTSRTSLKLRIEHLFWLHPFPTPDPQSSNLSAIWQNPAVQLFCQRAQASNHEWQINDSQAATIAQICQHLDGLPLVIELA
AVRTQFVTPTTLLARLSNRLGILTNTMRDAPAHQSTLRRTLEWSYQLLDSNEQQIFARLSVFATDSDFEAIVAVCADLAP
SNDDIFDCMASLVAKSLVIHRPDPQGNSRFGMLATIREFAASLLAEQQQTHHYTQRYINYYIELAEKIDRELRGKEQIQL
LEQLESEFHHWQAVLRLCLNQQQYHGFLRLFAALSQFWYGHGHFMEAWQWLSAVDQALNHVDSPIIQARAALGAGIVTNI
HHCLDLPLGYLERALDLCQQLNDQQGIATCYLLLGLIMMRKHQYVQATRWLNQSLNYFESSVEYWLLSINHLLLAQLNIY
LNDLDQASRYLDLVGHSPQLRLDPFRSSWYQSLQGHVAFYKRCYTEALTWHQQSLVERQQLGIKGDIAVSWLRIAQTERA
LGHYQPTRNALEQSLKLWQMHDNQENVLHCLEEFAALLAYDQQHQTATYLLSYAWFQREQRQLPHPPIDQARSQQFGMWL
QNQQPSNVWREAWSYGQTLKLDQVIGFVLAG

Specific function: Unknown

COG id: COG3903

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 94977; Mature: 94977

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRQAFAAWLRHVRHELQYSQDQFAEQLNYATVTYRKVERGLAPSAAFLERLAMVLELP
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
ASDMRILHDFANSDTALQALSLPDHLEHLQPQVAQAKPAIAATPHTLPMLPYPLIGRERE
CHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
VETLTKLLQHPQHRLITVIGPPGVGKTRVAQAVGWASLGHFCDGIWYVEGIQCTTIADFW
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHH
VDIANMLGRSANSSMTLIEQISALIGQKNSLLILDNCEHLSEINLGLAQLLAQCSGLKIL
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEE
VTSRTSLKLRIEHLFWLHPFPTPDPQSSNLSAIWQNPAVQLFCQRAQASNHEWQINDSQA
EECCCCCEEEEEHEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEECCHHH
ATIAQICQHLDGLPLVIELAAVRTQFVTPTTLLARLSNRLGILTNTMRDAPAHQSTLRRT
HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LEWSYQLLDSNEQQIFARLSVFATDSDFEAIVAVCADLAPSNDDIFDCMASLVAKSLVIH
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEE
RPDPQGNSRFGMLATIREFAASLLAEQQQTHHYTQRYINYYIELAEKIDRELRGKEQIQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LEQLESEFHHWQAVLRLCLNQQQYHGFLRLFAALSQFWYGHGHFMEAWQWLSAVDQALNH
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VDSPIIQARAALGAGIVTNIHHCLDLPLGYLERALDLCQQLNDQQGIATCYLLLGLIMMR
HCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KHQYVQATRWLNQSLNYFESSVEYWLLSINHLLLAQLNIYLNDLDQASRYLDLVGHSPQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RLDPFRSSWYQSLQGHVAFYKRCYTEALTWHQQSLVERQQLGIKGDIAVSWLRIAQTERA
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGHYQPTRNALEQSLKLWQMHDNQENVLHCLEEFAALLAYDQQHQTATYLLSYAWFQREQ
HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLPHPPIDQARSQQFGMWLQNQQPSNVWREAWSYGQTLKLDQVIGFVLAG
HCCCCCCCCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCEEHHHHHHHHHCC
>Mature Secondary Structure
MKQRQAFAAWLRHVRHELQYSQDQFAEQLNYATVTYRKVERGLAPSAAFLERLAMVLELP
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
ASDMRILHDFANSDTALQALSLPDHLEHLQPQVAQAKPAIAATPHTLPMLPYPLIGRERE
CHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
VETLTKLLQHPQHRLITVIGPPGVGKTRVAQAVGWASLGHFCDGIWYVEGIQCTTIADFW
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHH
VDIANMLGRSANSSMTLIEQISALIGQKNSLLILDNCEHLSEINLGLAQLLAQCSGLKIL
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEE
VTSRTSLKLRIEHLFWLHPFPTPDPQSSNLSAIWQNPAVQLFCQRAQASNHEWQINDSQA
EECCCCCEEEEEHEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEECCHHH
ATIAQICQHLDGLPLVIELAAVRTQFVTPTTLLARLSNRLGILTNTMRDAPAHQSTLRRT
HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LEWSYQLLDSNEQQIFARLSVFATDSDFEAIVAVCADLAPSNDDIFDCMASLVAKSLVIH
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEE
RPDPQGNSRFGMLATIREFAASLLAEQQQTHHYTQRYINYYIELAEKIDRELRGKEQIQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LEQLESEFHHWQAVLRLCLNQQQYHGFLRLFAALSQFWYGHGHFMEAWQWLSAVDQALNH
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VDSPIIQARAALGAGIVTNIHHCLDLPLGYLERALDLCQQLNDQQGIATCYLLLGLIMMR
HCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KHQYVQATRWLNQSLNYFESSVEYWLLSINHLLLAQLNIYLNDLDQASRYLDLVGHSPQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RLDPFRSSWYQSLQGHVAFYKRCYTEALTWHQQSLVERQQLGIKGDIAVSWLRIAQTERA
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGHYQPTRNALEQSLKLWQMHDNQENVLHCLEEFAALLAYDQQHQTATYLLSYAWFQREQ
HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLPHPPIDQARSQQFGMWLQNQQPSNVWREAWSYGQTLKLDQVIGFVLAG
HCCCCCCCCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]