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The map label for this gene is yjbG [H]

Identifier: 159898341

GI number: 159898341

Start: 2113344

End: 2115137

Strand: Reverse

Name: yjbG [H]

Synonym: Haur_1817

Alternate gene names: 159898341

Gene position: 2115137-2113344 (Counterclockwise)

Preceding gene: 159898345

Following gene: 159898340

Centisome position: 33.33

GC content: 44.98

Gene sequence:

>1794_bases
ATGAATACCACCCAAAGTTTTCTTGTAGCCCGTTGGATACGAGACGATATTCTACCAACCGATACTGAAACGAATACATA
CCAATCGTATCAGCAAACAATTGCCGATCTTGATCGTTGTGTGGCACAATTCGAACTCCTGCGTTCATCCCTCGATAAGT
CCCTTTCGTCCGAGGCGGTGCTCCAAGCTATTCGCGATTTTGAAACGATTACCACCTTCATAAAACGACTTAGCGGGTAT
GCCGAGCTTTGGATAGCAGAGGATACGCAAAATCCGCATGCCCAAGCATGCGCAACCCTGATTGATATTGTGATTACAAA
AGCAACGAATAAAACACTTTTTTTTCCCCTATGGTGGAAGAATTTGCCTGAGGATGTGGCTGCATCGATTCTTGGAGACA
TCCCCCAGTACGCCTATTGGTTGCGACAGATGCGAAGTGCTGTTATCCACACGCTGCCAGAACCTGTCGAGCAAGCTATT
AATCTCAAGAACAGTACTGGTGTCACAGCGCTTCGTGCCTTGTACGATGCGATAACGAGTCGGTATAGCTTTACCTTAGA
AGCCGATGGACAGATTCACCACTTAACTGATAGTGGTATTTGGGGCTATGCATCGCATCCTGATCCTGCTGTTCGCGATC
GTGCTTTTGTTGAGCTGTACCGCGTTTACAGCCAAGATGCCTCGCTGCTTGGTCGTATTTATTTCACCCTCGTGCAGGAT
TGGTATCAAGAATATATTGAACTGCGTCGTTATAGCAGTCCCTTAGCGGTACGAAATCAGATGAATGATATCCCCGACGC
GCTGATTGAAACCCTCTTTCGCGTTTGCCGCACCAATACCCCACTCTTTCACCGCTACTTCCGATTAAAAGCACGTTGGC
TTGGAATGGAACGAATGCGCCGTTGTGATTTAGCGGCCCCGATTATTACCAAGAAACAATCCTATACCTGGAAACAAGCG
GTTGAGATGACACTTGCAACCTTTGAGTCCTTTGATCCGCTTTTTTACCAGCTTGCGCATCGCATTTTTCAAGCAAATCA
TGTGGATAGTGAAGTGCGGAGTGGTAAGCGTCGTGGTTGTTGGTGTTTAGATTTTGGACCTACGATAACTCCATGGGTTC
AGATTGACTTTAATGGTCGCGTCGATGACATTGCTGCCCTCATACATGAGTTTGGGCATGCTATTCATGGCATGCTCGCT
GAACACCAATCGGTATTGCAATATGCTCCATCAATTCCCCTTGCTGAAGTTGGAGCATTGTTTTGTGAGTTACTTTTTGC
CGATCATCTCTTACAACAAACCCATGATCCTGAGGTACGGATTGGGTTACGATTTAAACAGTTGAACGATTCTTTTGCCT
TTCTCCATCGTCAAATCTATTTTACCTTTTTTGAATGCACAGCCCATGATTTGATTCAGCAGGGTGCTTCGATTGACGAT
GTTGCCCAAGCCTATCTTGATACGGTCAGAGAGGAATTTGGTGATACCATTGACATTCCTGATGCAATGCGCTGGGAGTG
GACATTAATTTTCCATCTCTTCCATTATCCATTCTATATGTATAGTTATGCATTTGGACAACTGCTTGCTTTAGCGCTCT
ATCAGCAATATCGCCAAGAAGGAAATTCTTTTAAAGACCGCTTCTTTGAAATATTGAGGGCTGGAAGTTCTGATCATCCT
GTCGCCATTTTGTCTAAGGCCGGGGTTAATATTGCTGATCCACTATTTTGGCAAGGTGGGTATGATGTGATTCAGATAAT
GCTCGAGGATATTGAACAGATACCAATTCCCTAA

Upstream 100 bases:

>100_bases
ACAAAAGTCAAGATTTGAGATCAACATCTTACGATTGCCATCGAGCACGACTTGTTCTATAAAGGTATGAAATAAGCACA
AGACAGAGGATTAGCAGATT

Downstream 100 bases:

>100_bases
AATACATCTTTAATCCAACAAGCGATGGTATAATTGAAGCGGCCCTCAACTGCAATAAATCTGCTCCATGATGCTCTATG
TAGTAGGCAACCACTTAGTT

Product: peptidase M3A and M3B thimet/oligopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MNTTQSFLVARWIRDDILPTDTETNTYQSYQQTIADLDRCVAQFELLRSSLDKSLSSEAVLQAIRDFETITTFIKRLSGY
AELWIAEDTQNPHAQACATLIDIVITKATNKTLFFPLWWKNLPEDVAASILGDIPQYAYWLRQMRSAVIHTLPEPVEQAI
NLKNSTGVTALRALYDAITSRYSFTLEADGQIHHLTDSGIWGYASHPDPAVRDRAFVELYRVYSQDASLLGRIYFTLVQD
WYQEYIELRRYSSPLAVRNQMNDIPDALIETLFRVCRTNTPLFHRYFRLKARWLGMERMRRCDLAAPIITKKQSYTWKQA
VEMTLATFESFDPLFYQLAHRIFQANHVDSEVRSGKRRGCWCLDFGPTITPWVQIDFNGRVDDIAALIHEFGHAIHGMLA
EHQSVLQYAPSIPLAEVGALFCELLFADHLLQQTHDPEVRIGLRFKQLNDSFAFLHRQIYFTFFECTAHDLIQQGASIDD
VAQAYLDTVREEFGDTIDIPDAMRWEWTLIFHLFHYPFYMYSYAFGQLLALALYQQYRQEGNSFKDRFFEILRAGSSDHP
VAILSKAGVNIADPLFWQGGYDVIQIMLEDIEQIPIP

Sequences:

>Translated_597_residues
MNTTQSFLVARWIRDDILPTDTETNTYQSYQQTIADLDRCVAQFELLRSSLDKSLSSEAVLQAIRDFETITTFIKRLSGY
AELWIAEDTQNPHAQACATLIDIVITKATNKTLFFPLWWKNLPEDVAASILGDIPQYAYWLRQMRSAVIHTLPEPVEQAI
NLKNSTGVTALRALYDAITSRYSFTLEADGQIHHLTDSGIWGYASHPDPAVRDRAFVELYRVYSQDASLLGRIYFTLVQD
WYQEYIELRRYSSPLAVRNQMNDIPDALIETLFRVCRTNTPLFHRYFRLKARWLGMERMRRCDLAAPIITKKQSYTWKQA
VEMTLATFESFDPLFYQLAHRIFQANHVDSEVRSGKRRGCWCLDFGPTITPWVQIDFNGRVDDIAALIHEFGHAIHGMLA
EHQSVLQYAPSIPLAEVGALFCELLFADHLLQQTHDPEVRIGLRFKQLNDSFAFLHRQIYFTFFECTAHDLIQQGASIDD
VAQAYLDTVREEFGDTIDIPDAMRWEWTLIFHLFHYPFYMYSYAFGQLLALALYQQYRQEGNSFKDRFFEILRAGSSDHP
VAILSKAGVNIADPLFWQGGYDVIQIMLEDIEQIPIP
>Mature_597_residues
MNTTQSFLVARWIRDDILPTDTETNTYQSYQQTIADLDRCVAQFELLRSSLDKSLSSEAVLQAIRDFETITTFIKRLSGY
AELWIAEDTQNPHAQACATLIDIVITKATNKTLFFPLWWKNLPEDVAASILGDIPQYAYWLRQMRSAVIHTLPEPVEQAI
NLKNSTGVTALRALYDAITSRYSFTLEADGQIHHLTDSGIWGYASHPDPAVRDRAFVELYRVYSQDASLLGRIYFTLVQD
WYQEYIELRRYSSPLAVRNQMNDIPDALIETLFRVCRTNTPLFHRYFRLKARWLGMERMRRCDLAAPIITKKQSYTWKQA
VEMTLATFESFDPLFYQLAHRIFQANHVDSEVRSGKRRGCWCLDFGPTITPWVQIDFNGRVDDIAALIHEFGHAIHGMLA
EHQSVLQYAPSIPLAEVGALFCELLFADHLLQQTHDPEVRIGLRFKQLNDSFAFLHRQIYFTFFECTAHDLIQQGASIDD
VAQAYLDTVREEFGDTIDIPDAMRWEWTLIFHLFHYPFYMYSYAFGQLLALALYQQYRQEGNSFKDRFFEILRAGSSDHP
VAILSKAGVNIADPLFWQGGYDVIQIMLEDIEQIPIP

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69038; Mature: 69038

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTQSFLVARWIRDDILPTDTETNTYQSYQQTIADLDRCVAQFELLRSSLDKSLSSEAV
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAIRDFETITTFIKRLSGYAELWIAEDTQNPHAQACATLIDIVITKATNKTLFFPLWWK
HHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHH
NLPEDVAASILGDIPQYAYWLRQMRSAVIHTLPEPVEQAINLKNSTGVTALRALYDAITS
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHC
RYSFTLEADGQIHHLTDSGIWGYASHPDPAVRDRAFVELYRVYSQDASLLGRIYFTLVQD
CCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WYQEYIELRRYSSPLAVRNQMNDIPDALIETLFRVCRTNTPLFHRYFRLKARWLGMERMR
HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHH
RCDLAAPIITKKQSYTWKQAVEMTLATFESFDPLFYQLAHRIFQANHVDSEVRSGKRRGC
HHCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCE
WCLDFGPTITPWVQIDFNGRVDDIAALIHEFGHAIHGMLAEHQSVLQYAPSIPLAEVGAL
EEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FCELLFADHLLQQTHDPEVRIGLRFKQLNDSFAFLHRQIYFTFFECTAHDLIQQGASIDD
HHHHHHHHHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VAQAYLDTVREEFGDTIDIPDAMRWEWTLIFHLFHYPFYMYSYAFGQLLALALYQQYRQE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNSFKDRFFEILRAGSSDHPVAILSKAGVNIADPLFWQGGYDVIQIMLEDIEQIPIP
CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTTQSFLVARWIRDDILPTDTETNTYQSYQQTIADLDRCVAQFELLRSSLDKSLSSEAV
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAIRDFETITTFIKRLSGYAELWIAEDTQNPHAQACATLIDIVITKATNKTLFFPLWWK
HHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHH
NLPEDVAASILGDIPQYAYWLRQMRSAVIHTLPEPVEQAINLKNSTGVTALRALYDAITS
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHC
RYSFTLEADGQIHHLTDSGIWGYASHPDPAVRDRAFVELYRVYSQDASLLGRIYFTLVQD
CCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WYQEYIELRRYSSPLAVRNQMNDIPDALIETLFRVCRTNTPLFHRYFRLKARWLGMERMR
HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHH
RCDLAAPIITKKQSYTWKQAVEMTLATFESFDPLFYQLAHRIFQANHVDSEVRSGKRRGC
HHCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCE
WCLDFGPTITPWVQIDFNGRVDDIAALIHEFGHAIHGMLAEHQSVLQYAPSIPLAEVGAL
EEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FCELLFADHLLQQTHDPEVRIGLRFKQLNDSFAFLHRQIYFTFFECTAHDLIQQGASIDD
HHHHHHHHHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VAQAYLDTVREEFGDTIDIPDAMRWEWTLIFHLFHYPFYMYSYAFGQLLALALYQQYRQE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNSFKDRFFEILRAGSSDHPVAILSKAGVNIADPLFWQGGYDVIQIMLEDIEQIPIP
CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]