| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898288
Identifier: 159898288
GI number: 159898288
Start: 2052510
End: 2052974
Strand: Reverse
Name: 159898288
Synonym: Haur_1764
Alternate gene names: NA
Gene position: 2052974-2052510 (Counterclockwise)
Preceding gene: 159898290
Following gene: 159898285
Centisome position: 32.35
GC content: 40.0
Gene sequence:
>465_bases ATGAGTAACCAACCCAATTACCAATCGCCAACGCCACCCAATAATCAACCAAATTATGCTCAGCCATACGACCCAAATCT CTATCAAGGCCAATATCCACCACAAACACTTTATGGCCAAAATCCCTATCAAGCTCAATATCAGCCGATCAATTATCCTT ATCAGGTGCCCAATTCGATCCAAGCTAATGCAAAAATAGATCGACAGCGCTCCAATATTGCATTCGTTGTATGCATCGTG ACGTTTATACTTGGAGGGGTTTTCTACAGTCGTAATCCACAGAACAGCGATGCAATCTTGTCTGGTTTTTTTTGGCTCTT TAGTAGCATTGCATGGGTCACTGCATGGTGTTTTTCAACCAAAAGCAAGGGCTATTCTGTATGGCTCGGTCTATTATCAC TATTAGGATTATTAGGGATGTTGATATTAATGGTTATTCCAAATCGTAACAAGCTAAAATATTAA
Upstream 100 bases:
>100_bases GTCCCAAAAAATATAGAGCTTAAAATCAACACTAACTGGGATTAATCTACCAATTCAAACATGCTATATTGAGCCATTCA ACGATTTGAGGAGAAATTTA
Downstream 100 bases:
>100_bases ACCGTTGCGCTGCCTGAGTTTCAAGCAGCGCACTCATTTTCGTTAAATTTAGGCCTCTGCCGCAGCCAAGGCTGGATACA GTGGTTGCAAGGCGGGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSNQPNYQSPTPPNNQPNYAQPYDPNLYQGQYPPQTLYGQNPYQAQYQPINYPYQVPNSIQANAKIDRQRSNIAFVVCIV TFILGGVFYSRNPQNSDAILSGFFWLFSSIAWVTAWCFSTKSKGYSVWLGLLSLLGLLGMLILMVIPNRNKLKY
Sequences:
>Translated_154_residues MSNQPNYQSPTPPNNQPNYAQPYDPNLYQGQYPPQTLYGQNPYQAQYQPINYPYQVPNSIQANAKIDRQRSNIAFVVCIV TFILGGVFYSRNPQNSDAILSGFFWLFSSIAWVTAWCFSTKSKGYSVWLGLLSLLGLLGMLILMVIPNRNKLKY >Mature_153_residues SNQPNYQSPTPPNNQPNYAQPYDPNLYQGQYPPQTLYGQNPYQAQYQPINYPYQVPNSIQANAKIDRQRSNIAFVVCIVT FILGGVFYSRNPQNSDAILSGFFWLFSSIAWVTAWCFSTKSKGYSVWLGLLSLLGLLGMLILMVIPNRNKLKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17557; Mature: 17426
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQPNYQSPTPPNNQPNYAQPYDPNLYQGQYPPQTLYGQNPYQAQYQPINYPYQVPNSI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QANAKIDRQRSNIAFVVCIVTFILGGVFYSRNPQNSDAILSGFFWLFSSIAWVTAWCFST CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC KSKGYSVWLGLLSLLGLLGMLILMVIPNRNKLKY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SNQPNYQSPTPPNNQPNYAQPYDPNLYQGQYPPQTLYGQNPYQAQYQPINYPYQVPNSI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QANAKIDRQRSNIAFVVCIVTFILGGVFYSRNPQNSDAILSGFFWLFSSIAWVTAWCFST CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC KSKGYSVWLGLLSLLGLLGMLILMVIPNRNKLKY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA