Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is malT [H]

Identifier: 159898252

GI number: 159898252

Start: 2012716

End: 2015328

Strand: Reverse

Name: malT [H]

Synonym: Haur_1728

Alternate gene names: 159898252

Gene position: 2015328-2012716 (Counterclockwise)

Preceding gene: 159898254

Following gene: 159898251

Centisome position: 31.75

GC content: 50.36

Gene sequence:

>2613_bases
ATGGTGATGCCAATATTAACGACTAAATGCTATATTCCAGTTCCGCGTTTGAATGGTGTCGTGCGTTCGCAGCTGCTCGA
ACGCTTGAAAGAACGTCATGATCGGCGTTTAACGGTGGTGTCGGCTCCGGCTGGCTTTGGCAAAACGATGCTTGTAAGTC
AGTGGATTGCGAATTGCAAGCAGCCTGTCGCCTGGCTGACGCTTGATCAAAACGATAATGATCTGGCGCGGTTTTTGGTG
TATCTTGTCGCAGCCTTACAAACAATTGAGCCAACATTTGGCTTAGAAATTATTCAGCGGTTACAAGCCCCAGAATTGCC
CTCAACTGAAACCATCTTGTTCTTGCTGCTGAATCAGCTGGCGACAATTGAGCAACAATCGATTTTAGTGCTTGATGATT
ACCATTGGCTGACGGCCAAACCAATTGCTGAGGCCATGCGCTTGCTGCTTGAACGCTTGCCACCCCAATTGCAAATCGTT
GTTATTACCCGCGAGGAGCCTGATCTGCCCTTGGCACGGCTTCGAGCACGCCATCAATTAACTGAACTGCGCGTGGCCGA
TTTACGCTTCACGGTCGCGGAAGCCCACCAATTTCTCAGCCAAACAATGGAATTAGATCTTTTAGCATCAGCAAGCCAAG
CCCTTACCGATCAAACTGAAGGCTGGATTACTGGCTTGCAATTGGCGGCAATTTCCATGCAAGGCCAGCAAGCATCAAGC
CCGCTGATTGATGGCTTTACTGGCAATCATCGGTTTGTATTGGATTATTTGCTTGAAGAGGTATTACAGCAACAACCTGC
CGAGATCCAGACATTTTTGTTGGTTACTTCGCTGCTTGATCGGATGTGTGGCTCGTTGTGTGAGGCAGTTTTGGCTGCTG
CTCCTGCTTCGGGCGCGGCAACTTTAGCCTATCTTGAACGTGCCAATCTGTTTATCGTGCCGCTCGATCATGAACGCCAT
TGGTATCGCTATCACCATTTATTTGCCGATTTGCTGCGCCAGCGCTTGGCGATTAGCTCATTAGGCCATGATCTGCCTGA
GTTGCATCGACGAGCCAGTCATTGGTACGAGGCTCATGGATTTGGGATTGAGGCCTTTCGCCATGCCGCCGCTGCCAATG
ATGTTGCGCATATCGAACGCTTGATTGATCAGCAGCAGATTTCGTTACACTTTCGCGGTACGGTCACAACCTTGCTCGAT
TGGTTGGCAACTGTGCCAAAAAGTGTTTTTGAGCAGCAGCCCTCGTTGTGGTGGCGGCATGCGTCGTTGATGTTGATGCT
TGGCCAAACCTCCGGTGTTGCCGAAAAACTTGCTGCTGCCGAAGCCGCGCTCCAAAGCTTCCCAGATGATCATCAAACGC
GCAACTTAATTGGCCAGATTGCAGCATCGCGGGCAATTTTGTTGTTGGCTCAATACCAATTCGCGTCAACGCTGGCGCAA
TCGCAGCGAGCATTAGAATATTTGGCCGCTGATAATGTGTTTTCGCTGACCTCGGCCTACTGGACGTTGGGCTTTGGCTA
TTTGGCTCATGGCGATCGGGCGGCGGCACGCCAAGCCCTGACCAAATCTGTTAGTTTGGCCCAAGCATCGGGTAGCAGCT
TTATCCGAATTTTGGCAACGATTGGTCTGGGCCAGCTGCAAGAATCAGAAAATCAACTGTATCAAGCCGCTGCAACCTAC
CAGCAAATTCTTGCATTGGCGGGCGAGCAACCGCTGCAAATTATCTACGAAGCCTACTTAGGTTTAGCGCGAATTTATTA
TCAATGGAATCAGCTAGATGCCGCTGAGCGTTATGCCCAACAAAGCCTTGATTTAGCCCAGCAATACGACCGCTTGATTG
ATCGTTCGATTATTTGCGAAATTTGGTTGGTGCGCTTGCAACTGGCGCGGAGAGCCAACGAACAGGCTGCGACCAAGCTG
GGGCAACTGGCCCAAACGGTGCGTCAACAGAACTTTACTCAGCGGCTTCCAGAGATTATCACGACCCAGATTGGCGTGCT
GTTGGCGCAAGCAGAGCTTCAGGCCGCCGCCGAATTAGCCCAAACAATTGATTCCCCATTAATTCAGGCGAAAGTTTTGC
TCGCTCAGGCCAATGCGGCGGCGGCTTTGGAATTACTACAACCCTTGATCGAGCAATTTCAAGCCAAGGGCTGGCTTGAT
CAACAGCTGCATGGCTTGATTTTGCAGGCCGTAGCCCAGCAACAACAAGGCCAAAAAGCGCCTGCACTTCGTACATTACA
AGCGGCTTTGGCCATGGCTGAACCAGGTGGCTTGATAAGAATTTTTATTGATGAAGGGCCAGAGTTGAAACAGCTATTGC
GCGAGTTGATTGGGCGTGGGTTGGGTAATGCTTATGCTCGCCAAATTTTAGCCGCCTTTGGGCAAATGCCATTGATGCCA
AGCGCTCAAGTTGCGCTGATCGAGCCATTAAGTGAGCGCGAGCTTGAGGTATTGGGTTTGATTGCTGCTGGGCTTTCGAA
TCAGGCGATTGCTGATCAATTGTATCTTTCGCTGTATACGGTCAAAGCCCATGTGCGCAATATTTATGGCAAACTCAGCG
TTAATAATCGCACTTTGGCGGTGGCCAAAGCCCAAGAGCTTGCCATATTGTAA

Upstream 100 bases:

>100_bases
CTAGCGCCATCTACAAAATAAGCGCTCAGATTGCGTCTGATTATAGCAAACGCACTGGTTTGCGAGGCTGACCTGAACGG
TTTGCTTTATAATTAAGGCC

Downstream 100 bases:

>100_bases
AGATTTACTGATTAGTCCTTTCCAATAGTTCTTTAGAGCTATGAGTTGTTGCTGCTCCATCGGCTATGCTGGCCCAAGCA
ATTATCGCTTGATGGAGACA

Product: ATP-dependent transcription regulator LuxR

Products: NA

Alternate protein names: ATP-dependent transcriptional activator malT [H]

Number of amino acids: Translated: 870; Mature: 870

Protein sequence:

>870_residues
MVMPILTTKCYIPVPRLNGVVRSQLLERLKERHDRRLTVVSAPAGFGKTMLVSQWIANCKQPVAWLTLDQNDNDLARFLV
YLVAALQTIEPTFGLEIIQRLQAPELPSTETILFLLLNQLATIEQQSILVLDDYHWLTAKPIAEAMRLLLERLPPQLQIV
VITREEPDLPLARLRARHQLTELRVADLRFTVAEAHQFLSQTMELDLLASASQALTDQTEGWITGLQLAAISMQGQQASS
PLIDGFTGNHRFVLDYLLEEVLQQQPAEIQTFLLVTSLLDRMCGSLCEAVLAAAPASGAATLAYLERANLFIVPLDHERH
WYRYHHLFADLLRQRLAISSLGHDLPELHRRASHWYEAHGFGIEAFRHAAAANDVAHIERLIDQQQISLHFRGTVTTLLD
WLATVPKSVFEQQPSLWWRHASLMLMLGQTSGVAEKLAAAEAALQSFPDDHQTRNLIGQIAASRAILLLAQYQFASTLAQ
SQRALEYLAADNVFSLTSAYWTLGFGYLAHGDRAAARQALTKSVSLAQASGSSFIRILATIGLGQLQESENQLYQAAATY
QQILALAGEQPLQIIYEAYLGLARIYYQWNQLDAAERYAQQSLDLAQQYDRLIDRSIICEIWLVRLQLARRANEQAATKL
GQLAQTVRQQNFTQRLPEIITTQIGVLLAQAELQAAAELAQTIDSPLIQAKVLLAQANAAAALELLQPLIEQFQAKGWLD
QQLHGLILQAVAQQQQGQKAPALRTLQAALAMAEPGGLIRIFIDEGPELKQLLRELIGRGLGNAYARQILAAFGQMPLMP
SAQVALIEPLSERELEVLGLIAAGLSNQAIADQLYLSLYTVKAHVRNIYGKLSVNNRTLAVAKAQELAIL

Sequences:

>Translated_870_residues
MVMPILTTKCYIPVPRLNGVVRSQLLERLKERHDRRLTVVSAPAGFGKTMLVSQWIANCKQPVAWLTLDQNDNDLARFLV
YLVAALQTIEPTFGLEIIQRLQAPELPSTETILFLLLNQLATIEQQSILVLDDYHWLTAKPIAEAMRLLLERLPPQLQIV
VITREEPDLPLARLRARHQLTELRVADLRFTVAEAHQFLSQTMELDLLASASQALTDQTEGWITGLQLAAISMQGQQASS
PLIDGFTGNHRFVLDYLLEEVLQQQPAEIQTFLLVTSLLDRMCGSLCEAVLAAAPASGAATLAYLERANLFIVPLDHERH
WYRYHHLFADLLRQRLAISSLGHDLPELHRRASHWYEAHGFGIEAFRHAAAANDVAHIERLIDQQQISLHFRGTVTTLLD
WLATVPKSVFEQQPSLWWRHASLMLMLGQTSGVAEKLAAAEAALQSFPDDHQTRNLIGQIAASRAILLLAQYQFASTLAQ
SQRALEYLAADNVFSLTSAYWTLGFGYLAHGDRAAARQALTKSVSLAQASGSSFIRILATIGLGQLQESENQLYQAAATY
QQILALAGEQPLQIIYEAYLGLARIYYQWNQLDAAERYAQQSLDLAQQYDRLIDRSIICEIWLVRLQLARRANEQAATKL
GQLAQTVRQQNFTQRLPEIITTQIGVLLAQAELQAAAELAQTIDSPLIQAKVLLAQANAAAALELLQPLIEQFQAKGWLD
QQLHGLILQAVAQQQQGQKAPALRTLQAALAMAEPGGLIRIFIDEGPELKQLLRELIGRGLGNAYARQILAAFGQMPLMP
SAQVALIEPLSERELEVLGLIAAGLSNQAIADQLYLSLYTVKAHVRNIYGKLSVNNRTLAVAKAQELAIL
>Mature_870_residues
MVMPILTTKCYIPVPRLNGVVRSQLLERLKERHDRRLTVVSAPAGFGKTMLVSQWIANCKQPVAWLTLDQNDNDLARFLV
YLVAALQTIEPTFGLEIIQRLQAPELPSTETILFLLLNQLATIEQQSILVLDDYHWLTAKPIAEAMRLLLERLPPQLQIV
VITREEPDLPLARLRARHQLTELRVADLRFTVAEAHQFLSQTMELDLLASASQALTDQTEGWITGLQLAAISMQGQQASS
PLIDGFTGNHRFVLDYLLEEVLQQQPAEIQTFLLVTSLLDRMCGSLCEAVLAAAPASGAATLAYLERANLFIVPLDHERH
WYRYHHLFADLLRQRLAISSLGHDLPELHRRASHWYEAHGFGIEAFRHAAAANDVAHIERLIDQQQISLHFRGTVTTLLD
WLATVPKSVFEQQPSLWWRHASLMLMLGQTSGVAEKLAAAEAALQSFPDDHQTRNLIGQIAASRAILLLAQYQFASTLAQ
SQRALEYLAADNVFSLTSAYWTLGFGYLAHGDRAAARQALTKSVSLAQASGSSFIRILATIGLGQLQESENQLYQAAATY
QQILALAGEQPLQIIYEAYLGLARIYYQWNQLDAAERYAQQSLDLAQQYDRLIDRSIICEIWLVRLQLARRANEQAATKL
GQLAQTVRQQNFTQRLPEIITTQIGVLLAQAELQAAAELAQTIDSPLIQAKVLLAQANAAAALELLQPLIEQFQAKGWLD
QQLHGLILQAVAQQQQGQKAPALRTLQAALAMAEPGGLIRIFIDEGPELKQLLRELIGRGLGNAYARQILAAFGQMPLMP
SAQVALIEPLSERELEVLGLIAAGLSNQAIADQLYLSLYTVKAHVRNIYGKLSVNNRTLAVAKAQELAIL

Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]

COG id: COG2909

COG function: function code K; ATP-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI2367223, Length=917, Percent_Identity=28.7895310796074, Blast_Score=260, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 96683; Mature: 96683

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50293 TPR_REGION ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMPILTTKCYIPVPRLNGVVRSQLLERLKERHDRRLTVVSAPAGFGKTMLVSQWIANCK
CCCCEEECCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCC
QPVAWLTLDQNDNDLARFLVYLVAALQTIEPTFGLEIIQRLQAPELPSTETILFLLLNQL
CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ATIEQQSILVLDDYHWLTAKPIAEAMRLLLERLPPQLQIVVITREEPDLPLARLRARHQL
HHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH
TELRVADLRFTVAEAHQFLSQTMELDLLASASQALTDQTEGWITGLQLAAISMQGQQASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
PLIDGFTGNHRFVLDYLLEEVLQQQPAEIQTFLLVTSLLDRMCGSLCEAVLAAAPASGAA
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TLAYLERANLFIVPLDHERHWYRYHHLFADLLRQRLAISSLGHDLPELHRRASHWYEAHG
HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
FGIEAFRHAAAANDVAHIERLIDQQQISLHFRGTVTTLLDWLATVPKSVFEQQPSLWWRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ASLMLMLGQTSGVAEKLAAAEAALQSFPDDHQTRNLIGQIAASRAILLLAQYQFASTLAQ
HHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQRALEYLAADNVFSLTSAYWTLGFGYLAHGDRAAARQALTKSVSLAQASGSSFIRILAT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGLGQLQESENQLYQAAATYQQILALAGEQPLQIIYEAYLGLARIYYQWNQLDAAERYAQ
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLDLAQQYDRLIDRSIICEIWLVRLQLARRANEQAATKLGQLAQTVRQQNFTQRLPEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTQIGVLLAQAELQAAAELAQTIDSPLIQAKVLLAQANAAAALELLQPLIEQFQAKGWLD
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
QQLHGLILQAVAQQQQGQKAPALRTLQAALAMAEPGGLIRIFIDEGPELKQLLRELIGRG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
LGNAYARQILAAFGQMPLMPSAQVALIEPLSERELEVLGLIAAGLSNQAIADQLYLSLYT
CCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VKAHVRNIYGKLSVNNRTLAVAKAQELAIL
HHHHHHHHHHEEEECCCEEEEECHHHHCCC
>Mature Secondary Structure
MVMPILTTKCYIPVPRLNGVVRSQLLERLKERHDRRLTVVSAPAGFGKTMLVSQWIANCK
CCCCEEECCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCC
QPVAWLTLDQNDNDLARFLVYLVAALQTIEPTFGLEIIQRLQAPELPSTETILFLLLNQL
CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ATIEQQSILVLDDYHWLTAKPIAEAMRLLLERLPPQLQIVVITREEPDLPLARLRARHQL
HHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH
TELRVADLRFTVAEAHQFLSQTMELDLLASASQALTDQTEGWITGLQLAAISMQGQQASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
PLIDGFTGNHRFVLDYLLEEVLQQQPAEIQTFLLVTSLLDRMCGSLCEAVLAAAPASGAA
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TLAYLERANLFIVPLDHERHWYRYHHLFADLLRQRLAISSLGHDLPELHRRASHWYEAHG
HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
FGIEAFRHAAAANDVAHIERLIDQQQISLHFRGTVTTLLDWLATVPKSVFEQQPSLWWRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ASLMLMLGQTSGVAEKLAAAEAALQSFPDDHQTRNLIGQIAASRAILLLAQYQFASTLAQ
HHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQRALEYLAADNVFSLTSAYWTLGFGYLAHGDRAAARQALTKSVSLAQASGSSFIRILAT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGLGQLQESENQLYQAAATYQQILALAGEQPLQIIYEAYLGLARIYYQWNQLDAAERYAQ
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLDLAQQYDRLIDRSIICEIWLVRLQLARRANEQAATKLGQLAQTVRQQNFTQRLPEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTQIGVLLAQAELQAAAELAQTIDSPLIQAKVLLAQANAAAALELLQPLIEQFQAKGWLD
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
QQLHGLILQAVAQQQQGQKAPALRTLQAALAMAEPGGLIRIFIDEGPELKQLLRELIGRG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
LGNAYARQILAAFGQMPLMPSAQVALIEPLSERELEVLGLIAAGLSNQAIADQLYLSLYT
CCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VKAHVRNIYGKLSVNNRTLAVAKAQELAIL
HHHHHHHHHHEEEECCCEEEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA