Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159898194
Identifier: 159898194
GI number: 159898194
Start: 1937028
End: 1937447
Strand: Reverse
Name: 159898194
Synonym: Haur_1670
Alternate gene names: NA
Gene position: 1937447-1937028 (Counterclockwise)
Preceding gene: 159898195
Following gene: 159898192
Centisome position: 30.53
GC content: 48.33
Gene sequence:
>420_bases ATGGATGAAATCGATGAAACCGCGCTTATTTTTGAGCGGTCAGCCTTACGCAAACTTTTTCGTAAAGCCGAGGATTATGA ACTGCCGCTCGATATTCGGCTCTCGCAGCATGGTTTTTACCATTGGCTGGCCGAACGAACCAATCGGATCTATCTAGTTT GGCATGATGGCACTCAAACGCGAGGAATTGTATTCAACATGTCGGCTCATGCGGGCAAGCCATTTCGCCAACGCCAATGT GATTTATGTGGTCAGTTCGTTGAAGTTGGCGATATGATTTCGGTGCGCAGCCTCAAAGGTCGCCAAGATGCCGCCTATCA GGCCACCTACAGCTATATTTGTGCCGATCTTGAGGATTGTCGGGGTTCAGCGATCAGTACTGGCCAATTAAACCATTTTC TGAACAAACATCGCAGCTAG
Upstream 100 bases:
>100_bases ATTCGAATGGTTGAAGCCCAAGCACAGCTTTAGGTCTAAGCAGCGCCGCCCACATATGCATACAATTGATTGTTACTAGG TTTTTTTGGAGTGTATGACC
Downstream 100 bases:
>100_bases CGCTCATGGGTAAATCGATCAACCATGGCGCTAATTAAAGGGATGACTTGGCGGCCAAACGCTGCTGGTGATTGGGTACG GGCGCGAGTTTTCCATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MDEIDETALIFERSALRKLFRKAEDYELPLDIRLSQHGFYHWLAERTNRIYLVWHDGTQTRGIVFNMSAHAGKPFRQRQC DLCGQFVEVGDMISVRSLKGRQDAAYQATYSYICADLEDCRGSAISTGQLNHFLNKHRS
Sequences:
>Translated_139_residues MDEIDETALIFERSALRKLFRKAEDYELPLDIRLSQHGFYHWLAERTNRIYLVWHDGTQTRGIVFNMSAHAGKPFRQRQC DLCGQFVEVGDMISVRSLKGRQDAAYQATYSYICADLEDCRGSAISTGQLNHFLNKHRS >Mature_139_residues MDEIDETALIFERSALRKLFRKAEDYELPLDIRLSQHGFYHWLAERTNRIYLVWHDGTQTRGIVFNMSAHAGKPFRQRQC DLCGQFVEVGDMISVRSLKGRQDAAYQATYSYICADLEDCRGSAISTGQLNHFLNKHRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16117; Mature: 16117
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIDETALIFERSALRKLFRKAEDYELPLDIRLSQHGFYHWLAERTNRIYLVWHDGTQT CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEECCCCCC RGIVFNMSAHAGKPFRQRQCDLCGQFVEVGDMISVRSLKGRQDAAYQATYSYICADLEDC CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCHHHH RGSAISTGQLNHFLNKHRS CCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MDEIDETALIFERSALRKLFRKAEDYELPLDIRLSQHGFYHWLAERTNRIYLVWHDGTQT CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEECCCCCC RGIVFNMSAHAGKPFRQRQCDLCGQFVEVGDMISVRSLKGRQDAAYQATYSYICADLEDC CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCHHHH RGSAISTGQLNHFLNKHRS CCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA