Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898174

Identifier: 159898174

GI number: 159898174

Start: 1917318

End: 1917890

Strand: Reverse

Name: 159898174

Synonym: Haur_1650

Alternate gene names: NA

Gene position: 1917890-1917318 (Counterclockwise)

Preceding gene: 159898175

Following gene: 159898173

Centisome position: 30.22

GC content: 55.15

Gene sequence:

>573_bases
ATGACGCGGTTCATTCGAAGCCTAGTAATTCTGCTGATCGCTCTTGTGGCTCTACCAACTCAACCTTCACATGCGGCGGA
TGTTGGGCCATTGGCATTAACCCCAACCGAGCCACCAACTCCAACCAATACACCCTTACCGACGAATACTCCTGAACCAA
TCATCCCAACCAATACACCCTTGCCAACCAACACCCCAGAACCACGAGTTACGGTTGAGCCAACCAGCATTGCTCAGCCA
ACTGGGGTAGCACCAACTCAAGCTCCAAGCATTGAGCCAACCGCCACGCCAATAATCTCAATGCCAGGCATCACGGCGAC
GGCAACTCCTGAGCAAAGCATTCCTAGCCCAACTCCCAGCCCATCGCCAACCCCCGAACAACCAAGTGCAACCCCCATGC
CCAGCGCAACTGCGATGCCGCAGCCAACTGCCAAGCCAGCAGCGCCACCAGCAGGCAATCAACCACCATTGCCACGCACC
AGTAGCGCTGATACTGCCGCCTTATGGTTTATTGGCTTATTGGGTTTATTAGTCGCTCTGATCGGCTTTGGCATCCAACG
ACGTGCCGCTTAG

Upstream 100 bases:

>100_bases
CGAATTGTCCTTATTCAATGTTTCATTGCTTGGGTCATGCCCGCTTTCACGATTCGCGATCAGTGGAACAGGCCAGCCCT
TTGATGTGGGAGTAGCTTGT

Downstream 100 bases:

>100_bases
TGTTAACCAACGAGGTTTAAACGTATGAAGCAAGCATCCTCTCGTTATTCATTCAGCACACTGGTTGTGTGTTGCACCTT
ATTGGTAGCATTCGCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTRFIRSLVILLIALVALPTQPSHAADVGPLALTPTEPPTPTNTPLPTNTPEPIIPTNTPLPTNTPEPRVTVEPTSIAQP
TGVAPTQAPSIEPTATPIISMPGITATATPEQSIPSPTPSPSPTPEQPSATPMPSATAMPQPTAKPAAPPAGNQPPLPRT
SSADTAALWFIGLLGLLVALIGFGIQRRAA

Sequences:

>Translated_190_residues
MTRFIRSLVILLIALVALPTQPSHAADVGPLALTPTEPPTPTNTPLPTNTPEPIIPTNTPLPTNTPEPRVTVEPTSIAQP
TGVAPTQAPSIEPTATPIISMPGITATATPEQSIPSPTPSPSPTPEQPSATPMPSATAMPQPTAKPAAPPAGNQPPLPRT
SSADTAALWFIGLLGLLVALIGFGIQRRAA
>Mature_189_residues
TRFIRSLVILLIALVALPTQPSHAADVGPLALTPTEPPTPTNTPLPTNTPEPIIPTNTPLPTNTPEPRVTVEPTSIAQPT
GVAPTQAPSIEPTATPIISMPGITATATPEQSIPSPTPSPSPTPEQPSATPMPSATAMPQPTAKPAAPPAGNQPPLPRTS
SADTAALWFIGLLGLLVALIGFGIQRRAA

Specific function: Unknown

COG id: COG5263

COG function: function code R; FOG: Glucan-binding domain (YG repeat)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19400; Mature: 19268

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFIRSLVILLIALVALPTQPSHAADVGPLALTPTEPPTPTNTPLPTNTPEPIIPTNTP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
LPTNTPEPRVTVEPTSIAQPTGVAPTQAPSIEPTATPIISMPGITATATPEQSIPSPTPS
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCC
PSPTPEQPSATPMPSATAMPQPTAKPAAPPAGNQPPLPRTSSADTAALWFIGLLGLLVAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IGFGIQRRAA
HCCCHHHCCC
>Mature Secondary Structure 
TRFIRSLVILLIALVALPTQPSHAADVGPLALTPTEPPTPTNTPLPTNTPEPIIPTNTP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
LPTNTPEPRVTVEPTSIAQPTGVAPTQAPSIEPTATPIISMPGITATATPEQSIPSPTPS
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCC
PSPTPEQPSATPMPSATAMPQPTAKPAAPPAGNQPPLPRTSSADTAALWFIGLLGLLVAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IGFGIQRRAA
HCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA