| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is phoU [H]
Identifier: 159898156
GI number: 159898156
Start: 1889993
End: 1890682
Strand: Reverse
Name: phoU [H]
Synonym: Haur_1632
Alternate gene names: 159898156
Gene position: 1890682-1889993 (Counterclockwise)
Preceding gene: 159898157
Following gene: 159898155
Centisome position: 29.79
GC content: 50.72
Gene sequence:
>690_bases ATGGGCGTGTCTCACCGTCACATATTTGATGAACAACTCACCGAGTTGCACGATGGGGTTTTTCGGGTTGGAACAATGGT TGAAGCAGCATTAAGCGAAGCACTTCAATCAATCAAACTATACGATCAAGCAGCAGTGCGCAAGGTCGTGCAAAACGATC AAACCATCAATCACGAAGTTCAACGCTTGCATGATCAAGCCCTGTTGATCATCGCCACCCAACAGCCGTTGGCCCGTGAT TTACGCTTAGTGAGTGTGGTGCTTAGCCTGCTGCCAGAGCTAGAGCGCATGGGCGATTATGCTGCGACAATCTGCAAACT GCAAGAACGGATCGCTGCCACGCCCAATTTTGTCAGCGTTTCAGCCATGCCCCAGCCAATTCCGCGCCTGATTAGCGAAT TGGGCCAGCGCACCAGCGAAATTTTGCATGCTGGTTTAGAGGCCTTGCGCCAAAACGATCGCAGCTTTGCCGACCGCGTA ACCGAACTCGATGATGTGATCGATCATTTGTATCGTGAGATGTTCGAGGCCACGGTCAAGGTTTCGACCACCAGCCCCGA TATGGCTGCTGCTACGATTCATCTGCTGACGTTGGCTCACAATCTTGAACGCTTGGGCGATCGAGTCACCAACTTGGCTG AGCAAATTGAATATCTGATTACTGGCAAAGTTGTGGTGCTTAACCATTAA
Upstream 100 bases:
>100_bases TGTCTTTATGGCAACAGGGCATATGGCCGACCTGAATGAACAACGGGCATAATCAAGAACGCTTTTGGTAGGTTGGCAGA TTCTCTGTTGGAGGTTTTTT
Downstream 100 bases:
>100_bases ACTGGAACATCATGGCATGCTCAGCGTAGTATCCTCGGATTGCAATTCGTTGGCATTGGAGGATGTATGATTTGGACATT GTTAGCGTGGCTGGGATTTT
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MGVSHRHIFDEQLTELHDGVFRVGTMVEAALSEALQSIKLYDQAAVRKVVQNDQTINHEVQRLHDQALLIIATQQPLARD LRLVSVVLSLLPELERMGDYAATICKLQERIAATPNFVSVSAMPQPIPRLISELGQRTSEILHAGLEALRQNDRSFADRV TELDDVIDHLYREMFEATVKVSTTSPDMAAATIHLLTLAHNLERLGDRVTNLAEQIEYLITGKVVVLNH
Sequences:
>Translated_229_residues MGVSHRHIFDEQLTELHDGVFRVGTMVEAALSEALQSIKLYDQAAVRKVVQNDQTINHEVQRLHDQALLIIATQQPLARD LRLVSVVLSLLPELERMGDYAATICKLQERIAATPNFVSVSAMPQPIPRLISELGQRTSEILHAGLEALRQNDRSFADRV TELDDVIDHLYREMFEATVKVSTTSPDMAAATIHLLTLAHNLERLGDRVTNLAEQIEYLITGKVVVLNH >Mature_228_residues GVSHRHIFDEQLTELHDGVFRVGTMVEAALSEALQSIKLYDQAAVRKVVQNDQTINHEVQRLHDQALLIIATQQPLARDL RLVSVVLSLLPELERMGDYAATICKLQERIAATPNFVSVSAMPQPIPRLISELGQRTSEILHAGLEALRQNDRSFADRVT ELDDVIDHLYREMFEATVKVSTTSPDMAAATIHLLTLAHNLERLGDRVTNLAEQIEYLITGKVVVLNH
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=226, Percent_Identity=31.858407079646, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25643; Mature: 25512
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSHRHIFDEQLTELHDGVFRVGTMVEAALSEALQSIKLYDQAAVRKVVQNDQTINHEV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QRLHDQALLIIATQQPLARDLRLVSVVLSLLPELERMGDYAATICKLQERIAATPNFVSV HHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE SAMPQPIPRLISELGQRTSEILHAGLEALRQNDRSFADRVTELDDVIDHLYREMFEATVK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSTTSPDMAAATIHLLTLAHNLERLGDRVTNLAEQIEYLITGKVVVLNH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure GVSHRHIFDEQLTELHDGVFRVGTMVEAALSEALQSIKLYDQAAVRKVVQNDQTINHEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QRLHDQALLIIATQQPLARDLRLVSVVLSLLPELERMGDYAATICKLQERIAATPNFVSV HHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE SAMPQPIPRLISELGQRTSEILHAGLEALRQNDRSFADRVTELDDVIDHLYREMFEATVK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSTTSPDMAAATIHLLTLAHNLERLGDRVTNLAEQIEYLITGKVVVLNH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]