| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898154
Identifier: 159898154
GI number: 159898154
Start: 1888958
End: 1889515
Strand: Reverse
Name: 159898154
Synonym: Haur_1630
Alternate gene names: NA
Gene position: 1889515-1888958 (Counterclockwise)
Preceding gene: 159898155
Following gene: 159898153
Centisome position: 29.77
GC content: 52.87
Gene sequence:
>558_bases ATGATCGATCTTGAGTATGTTCCCATGGAGACCCTTGAGGCAGGGTTGGATCACATTCGTCAAGCACCCAAGGATCAAGG GGTCTTGCAGCTAATCGTGCGTCGTCCTGCCACCGAGCAACGCGAAGTGCTCAGCGAAGGCCAGCTTGATCTGGTTGAGG GTTTAGTCGGCGATAATTGGCAAACGCGCGGCAGCTCACGGACTGACGACGGTAGCTCACACCCCGATATGCAGCTGAAC ATTATGAATGTGCGCTCGATTGGCTTGCTAGCGCCTGACCAAGAGCGTTGGCAATGGGCTGGCGATCAATTGTTTATCGA TCTCGATTTGAGCGATGCAAACTTGCCAGCAGGCACACGCCTGACCATTGGCGAGGCAATTATTGAGGTAACTGATCAGC CGCATAATGGCTGCAAAAAGTTCGCCCAACGCTACGGCCAAGATGCGATTAAGTTCGTCAATTCAGCCGTTGGCAAAGAA TTGCATTTGCGTGGAATCAATGCGCGGGTAGTTCAACCTGGCACGATCCGCCAAGGGGATCAAGTCCGCAAGATCTAA
Upstream 100 bases:
>100_bases GCGTCGTGACCCAAGCCATGGCATAATAAAGCGCCACAGTTGGCGCAACGAGTCTCCAACTTGGAGGCTCGTTTTTTTGT TTACGATGAGGTAGGATGCC
Downstream 100 bases:
>100_bases CCCATGTGGTATAGCCTGAAATAGGACTATGGGTGCGAAGAATCGTTAGGTTGAGGGTAAGCTTGAGGCAGGATACTATG GTCAAATCCTTCCTCCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MIDLEYVPMETLEAGLDHIRQAPKDQGVLQLIVRRPATEQREVLSEGQLDLVEGLVGDNWQTRGSSRTDDGSSHPDMQLN IMNVRSIGLLAPDQERWQWAGDQLFIDLDLSDANLPAGTRLTIGEAIIEVTDQPHNGCKKFAQRYGQDAIKFVNSAVGKE LHLRGINARVVQPGTIRQGDQVRKI
Sequences:
>Translated_185_residues MIDLEYVPMETLEAGLDHIRQAPKDQGVLQLIVRRPATEQREVLSEGQLDLVEGLVGDNWQTRGSSRTDDGSSHPDMQLN IMNVRSIGLLAPDQERWQWAGDQLFIDLDLSDANLPAGTRLTIGEAIIEVTDQPHNGCKKFAQRYGQDAIKFVNSAVGKE LHLRGINARVVQPGTIRQGDQVRKI >Mature_185_residues MIDLEYVPMETLEAGLDHIRQAPKDQGVLQLIVRRPATEQREVLSEGQLDLVEGLVGDNWQTRGSSRTDDGSSHPDMQLN IMNVRSIGLLAPDQERWQWAGDQLFIDLDLSDANLPAGTRLTIGEAIIEVTDQPHNGCKKFAQRYGQDAIKFVNSAVGKE LHLRGINARVVQPGTIRQGDQVRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20603; Mature: 20603
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLEYVPMETLEAGLDHIRQAPKDQGVLQLIVRRPATEQREVLSEGQLDLVEGLVGDNW CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCC QTRGSSRTDDGSSHPDMQLNIMNVRSIGLLAPDQERWQWAGDQLFIDLDLSDANLPAGTR CCCCCCCCCCCCCCCCEEEEEEEEEEECEECCCHHHHEECCCEEEEEEECCCCCCCCCCE LTIGEAIIEVTDQPHNGCKKFAQRYGQDAIKFVNSAVGKELHLRGINARVVQPGTIRQGD EEHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCC QVRKI HHCCC >Mature Secondary Structure MIDLEYVPMETLEAGLDHIRQAPKDQGVLQLIVRRPATEQREVLSEGQLDLVEGLVGDNW CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCC QTRGSSRTDDGSSHPDMQLNIMNVRSIGLLAPDQERWQWAGDQLFIDLDLSDANLPAGTR CCCCCCCCCCCCCCCCEEEEEEEEEEECEECCCHHHHEECCCEEEEEEECCCCCCCCCCE LTIGEAIIEVTDQPHNGCKKFAQRYGQDAIKFVNSAVGKELHLRGINARVVQPGTIRQGD EEHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCC QVRKI HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA