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The map label for this gene is rutD [H]

Identifier: 159898034

GI number: 159898034

Start: 1759087

End: 1759872

Strand: Reverse

Name: rutD [H]

Synonym: Haur_1509

Alternate gene names: 159898034

Gene position: 1759872-1759087 (Counterclockwise)

Preceding gene: 159898035

Following gene: 159898032

Centisome position: 27.73

GC content: 47.46

Gene sequence:

>786_bases
ATGTTGGTAAAAAGTGGCTATGCCCCAATTCACGATCTTCAGCTCTACTATGAAATTCATGGCAGCGGTCAGCCGTTAGT
TTTGTTGCACGGCGGATTGGGTGGAATTGGCATGTTTGCAGATTTACTACCAGCGCTGGCTGAACAATATCAAGTGATCG
GCGTTGAACTTCAAGGCCATGCCCGAACGAATGATATACCACGACCATTAAGTTATGCTGCTATGGCCGATGATGTCGCA
GCATTAATCCAATATCTTGGTTTTAGCCAGGTTGATGTAGTAGGTTTCTCGCTAGGTGGTGGGGTTGCACTCCAAACTGC
CATTCGTCATCAGCAGTTGGTAGGCAAATTGATCGTCATCTCCGCAACATTCCGTGATACTGCCTGGTATCCAGCAGTCC
GCGCGGCCATTGGCCAGCTCGATGAAGTTGCGGCAGCAGCAATGGTCGAATCAATACCCTACAAATTTTATCAGGAATAT
GCGCCGAATCCGGCTAATTGGGTGCAACTCGTTTGCAAAACAGGGGCAATGGGCAAGCAATCTTTTGATTGGAGCAGCGA
TGTCGCTAAGCTCCAAAGCCCATGTTTAGTAGTCCAAGGTGATGCAGATAGCATTCCGCTCCGTCATGCGATTGAATTTT
TTGAACTGCTTGGCGGACCACAGTCCCATGATCCAGAGCAACGCAGCCAGTCGCAGTTAGCAATTTTACCGAATATCAAC
CACTTCAACATTATCGACCGCATCGATCTGCTAATGCCAGTTATCAATCAATTTTTAGCTAGCTAA

Upstream 100 bases:

>100_bases
GCCGAAGGTCATGCTGATAATCTCCAACCCGCAGCGAACGAAGCCGCAATCTAGCAAATACCTTAGTTCATTCACGATAT
ATTTAAGGAGTGTAAGGCAC

Downstream 100 bases:

>100_bases
TATCATTGGGGAGTATTTTGCCCAAAACACTCCCCAACTTCCAAGATTAACGCTTGAGCAAAGCCCGTAATTCTTCGATA
GTTAGCGGTTGCTCTTTACC

Product: alpha/beta hydrolase fold-domain containing protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLVKSGYAPIHDLQLYYEIHGSGQPLVLLHGGLGGIGMFADLLPALAEQYQVIGVELQGHARTNDIPRPLSYAAMADDVA
ALIQYLGFSQVDVVGFSLGGGVALQTAIRHQQLVGKLIVISATFRDTAWYPAVRAAIGQLDEVAAAAMVESIPYKFYQEY
APNPANWVQLVCKTGAMGKQSFDWSSDVAKLQSPCLVVQGDADSIPLRHAIEFFELLGGPQSHDPEQRSQSQLAILPNIN
HFNIIDRIDLLMPVINQFLAS

Sequences:

>Translated_261_residues
MLVKSGYAPIHDLQLYYEIHGSGQPLVLLHGGLGGIGMFADLLPALAEQYQVIGVELQGHARTNDIPRPLSYAAMADDVA
ALIQYLGFSQVDVVGFSLGGGVALQTAIRHQQLVGKLIVISATFRDTAWYPAVRAAIGQLDEVAAAAMVESIPYKFYQEY
APNPANWVQLVCKTGAMGKQSFDWSSDVAKLQSPCLVVQGDADSIPLRHAIEFFELLGGPQSHDPEQRSQSQLAILPNIN
HFNIIDRIDLLMPVINQFLAS
>Mature_261_residues
MLVKSGYAPIHDLQLYYEIHGSGQPLVLLHGGLGGIGMFADLLPALAEQYQVIGVELQGHARTNDIPRPLSYAAMADDVA
ALIQYLGFSQVDVVGFSLGGGVALQTAIRHQQLVGKLIVISATFRDTAWYPAVRAAIGQLDEVAAAAMVESIPYKFYQEY
APNPANWVQLVCKTGAMGKQSFDWSSDVAKLQSPCLVVQGDADSIPLRHAIEFFELLGGPQSHDPEQRSQSQLAILPNIN
HFNIIDRIDLLMPVINQFLAS

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 28367; Mature: 28367

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKSGYAPIHDLQLYYEIHGSGQPLVLLHGGLGGIGMFADLLPALAEQYQVIGVELQGH
CCCCCCCCCHHHEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEECC
ARTNDIPRPLSYAAMADDVAALIQYLGFSQVDVVGFSLGGGVALQTAIRHQQLVGKLIVI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCEEEEE
SATFRDTAWYPAVRAAIGQLDEVAAAAMVESIPYKFYQEYAPNPANWVQLVCKTGAMGKQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCC
SFDWSSDVAKLQSPCLVVQGDADSIPLRHAIEFFELLGGPQSHDPEQRSQSQLAILPNIN
CCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCC
HFNIIDRIDLLMPVINQFLAS
CCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVKSGYAPIHDLQLYYEIHGSGQPLVLLHGGLGGIGMFADLLPALAEQYQVIGVELQGH
CCCCCCCCCHHHEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEECC
ARTNDIPRPLSYAAMADDVAALIQYLGFSQVDVVGFSLGGGVALQTAIRHQQLVGKLIVI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCEEEEE
SATFRDTAWYPAVRAAIGQLDEVAAAAMVESIPYKFYQEYAPNPANWVQLVCKTGAMGKQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCC
SFDWSSDVAKLQSPCLVVQGDADSIPLRHAIEFFELLGGPQSHDPEQRSQSQLAILPNIN
CCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCC
HFNIIDRIDLLMPVINQFLAS
CCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA