| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is nudG [C]
Identifier: 159898026
GI number: 159898026
Start: 1750093
End: 1750401
Strand: Reverse
Name: nudG [C]
Synonym: Haur_1501
Alternate gene names: 159898026
Gene position: 1750401-1750093 (Counterclockwise)
Preceding gene: 159898028
Following gene: 159898025
Centisome position: 27.58
GC content: 46.93
Gene sequence:
>309_bases ATGAACCAGATTCCACCACGCCATATCGTAACCGTTGCTGGTTGTGTTGTTAACCATAATGGTGAAATTTTGCTTTTGCA AAGCCCGCGAGGCGGTTGGGAATTTCCTGGTGGGCAGGTTGAAATTGGTGAGAGCCTGACCCAAGCGCTGACTCGCGAGA TTTTTGAAGAAACTGGCGTGCAGGCTAAAATTGAGCACTTAGTCGGCGTATCTTCCAATCTAGCCTTGGGTAGCGTTAAT CTCGATTTTCGTTGTAGCTATCAATCTGGACAATTAACCACTAGCGCCGAAAGTTTAGCAGTTCAGTAG
Upstream 100 bases:
>100_bases GATAAAAGACACAGCTAAGCAAGGTATCAGTTGGCTACGATTGAACGAAGCAGTGCTCTCAGGCAAACTCCATGCAACAA GATTTAATTGAGGAGTTGTC
Downstream 100 bases:
>100_bases ATAGTACCTGAGCAAGCGCTTGATTTAGTTCAACGGCCATCAATCCATGCGCGGTTGATGACCATGCTCAATCCGACAAA TCAAATCTTGTATCGCTCCT
Product: NUDIX hydrolase
Products: CMP; diphosphate [C]
Alternate protein names: ORF154 [H]
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGVQAKIEHLVGVSSNLALGSVN LDFRCSYQSGQLTTSAESLAVQ
Sequences:
>Translated_102_residues MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGVQAKIEHLVGVSSNLALGSVN LDFRCSYQSGQLTTSAESLAVQ >Mature_102_residues MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGVQAKIEHLVGVSSNLALGSVN LDFRCSYQSGQLTTSAESLAVQ
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 10931; Mature: 10931
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGV CCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC QAKIEHLVGVSSNLALGSVNLDFRCSYQSGQLTTSAESLAVQ CEEEHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCEECC >Mature Secondary Structure MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGV CCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC QAKIEHLVGVSSNLALGSVNLDFRCSYQSGQLTTSAESLAVQ CEEEHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934842 [H]