Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is nudG [C]

Identifier: 159898026

GI number: 159898026

Start: 1750093

End: 1750401

Strand: Reverse

Name: nudG [C]

Synonym: Haur_1501

Alternate gene names: 159898026

Gene position: 1750401-1750093 (Counterclockwise)

Preceding gene: 159898028

Following gene: 159898025

Centisome position: 27.58

GC content: 46.93

Gene sequence:

>309_bases
ATGAACCAGATTCCACCACGCCATATCGTAACCGTTGCTGGTTGTGTTGTTAACCATAATGGTGAAATTTTGCTTTTGCA
AAGCCCGCGAGGCGGTTGGGAATTTCCTGGTGGGCAGGTTGAAATTGGTGAGAGCCTGACCCAAGCGCTGACTCGCGAGA
TTTTTGAAGAAACTGGCGTGCAGGCTAAAATTGAGCACTTAGTCGGCGTATCTTCCAATCTAGCCTTGGGTAGCGTTAAT
CTCGATTTTCGTTGTAGCTATCAATCTGGACAATTAACCACTAGCGCCGAAAGTTTAGCAGTTCAGTAG

Upstream 100 bases:

>100_bases
GATAAAAGACACAGCTAAGCAAGGTATCAGTTGGCTACGATTGAACGAAGCAGTGCTCTCAGGCAAACTCCATGCAACAA
GATTTAATTGAGGAGTTGTC

Downstream 100 bases:

>100_bases
ATAGTACCTGAGCAAGCGCTTGATTTAGTTCAACGGCCATCAATCCATGCGCGGTTGATGACCATGCTCAATCCGACAAA
TCAAATCTTGTATCGCTCCT

Product: NUDIX hydrolase

Products: CMP; diphosphate [C]

Alternate protein names: ORF154 [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGVQAKIEHLVGVSSNLALGSVN
LDFRCSYQSGQLTTSAESLAVQ

Sequences:

>Translated_102_residues
MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGVQAKIEHLVGVSSNLALGSVN
LDFRCSYQSGQLTTSAESLAVQ
>Mature_102_residues
MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGVQAKIEHLVGVSSNLALGSVN
LDFRCSYQSGQLTTSAESLAVQ

Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 10931; Mature: 10931

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGV
CCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC
QAKIEHLVGVSSNLALGSVNLDFRCSYQSGQLTTSAESLAVQ
CEEEHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCEECC
>Mature Secondary Structure
MNQIPPRHIVTVAGCVVNHNGEILLLQSPRGGWEFPGGQVEIGESLTQALTREIFEETGV
CCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC
QAKIEHLVGVSSNLALGSVNLDFRCSYQSGQLTTSAESLAVQ
CEEEHHHHCCCCCCEEEECCCEEEECCCCCCEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe; Mn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; H2O [C]

Specific reaction: CTP + H2O = CMP + diphosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934842 [H]