| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898008
Identifier: 159898008
GI number: 159898008
Start: 1732244
End: 1732633
Strand: Reverse
Name: 159898008
Synonym: Haur_1483
Alternate gene names: NA
Gene position: 1732633-1732244 (Counterclockwise)
Preceding gene: 159898009
Following gene: 159898007
Centisome position: 27.3
GC content: 52.82
Gene sequence:
>390_bases GTGGTTAAGTTGCGCCAAATAACCAGTGTACTGGGCATTTTATGGCAGCAATTGCTCTGTTGGGCGATGGTGCTGCATCT TGGCGTGGGCTGCCCAGTCGGCTGTGTGGTTAATTGCGAAGCCCAAGCACAGCTTAAAACTCCAGTCATTGAACAACCAA TCGTCTTAGAATGTACCACTGAACACTCGGTGATCCCAAGCTATGCGGTTGAGCCAAGTAGTCCTGCCAACACCGTTGTG CAGTTGGTCGCTTGGTTTCCAATGGTGTTAATTCTGCCCTCCTTTAGCCGCAACCTAGCCAGCCAACGCCAGCAATGGCT GATTCCGCTGCAACAGGCTTGCTCGTATATTGTGCTGCCCACCGCACCGCCTCCTCGTCCAACAAGCTGA
Upstream 100 bases:
>100_bases AACGTTCAATTAATCGCCTTAAAAATCAGCGCTTAACCTGATCTTTCATTCTCAAACTATGGTATGATCGGCGTAAGTTG ATCGATTTTAGGGTTTGCTT
Downstream 100 bases:
>100_bases GTCCATCGTTCGATTCAGATTTTGTTGATGCTGTAGATCTACAGCTTTTTCGAGGATGTGCATGATGAGTAACTCAACCC GTTCAGCCAAAGGCCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MVKLRQITSVLGILWQQLLCWAMVLHLGVGCPVGCVVNCEAQAQLKTPVIEQPIVLECTTEHSVIPSYAVEPSSPANTVV QLVAWFPMVLILPSFSRNLASQRQQWLIPLQQACSYIVLPTAPPPRPTS
Sequences:
>Translated_129_residues MVKLRQITSVLGILWQQLLCWAMVLHLGVGCPVGCVVNCEAQAQLKTPVIEQPIVLECTTEHSVIPSYAVEPSSPANTVV QLVAWFPMVLILPSFSRNLASQRQQWLIPLQQACSYIVLPTAPPPRPTS >Mature_129_residues MVKLRQITSVLGILWQQLLCWAMVLHLGVGCPVGCVVNCEAQAQLKTPVIEQPIVLECTTEHSVIPSYAVEPSSPANTVV QLVAWFPMVLILPSFSRNLASQRQQWLIPLQQACSYIVLPTAPPPRPTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14185; Mature: 14185
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLRQITSVLGILWQQLLCWAMVLHLGVGCPVGCVVNCEAQAQLKTPVIEQPIVLECTT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECC EHSVIPSYAVEPSSPANTVVQLVAWFPMVLILPSFSRNLASQRQQWLIPLQQACSYIVLP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCEEEEC TAPPPRPTS CCCCCCCCC >Mature Secondary Structure MVKLRQITSVLGILWQQLLCWAMVLHLGVGCPVGCVVNCEAQAQLKTPVIEQPIVLECTT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECC EHSVIPSYAVEPSSPANTVVQLVAWFPMVLILPSFSRNLASQRQQWLIPLQQACSYIVLP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCEEEEC TAPPPRPTS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA