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The map label for this gene is ynjB [H]

Identifier: 159897765

GI number: 159897765

Start: 1440159

End: 1441448

Strand: Reverse

Name: ynjB [H]

Synonym: Haur_1236

Alternate gene names: 159897765

Gene position: 1441448-1440159 (Counterclockwise)

Preceding gene: 159897766

Following gene: 159897764

Centisome position: 22.71

GC content: 50.0

Gene sequence:

>1290_bases
ATGCAAGCAACAGCACGCAAACGGATTTGGAATTTGGGTTTGTTAATTGGCCTTCTGAGCCTGATTATCGCCAGTTGTGG
TAGCAATACGGCTACGCCAACCAGTGCTCCCAGCAGCACCAGCCTTGATCTGAGCAATTGGACCAGTATTGAGCAAGCCG
CCAACGGCCAAACGGTCAATTGGTATATGTGGGGTGGCTCGGATAGCATCAATCGTTTTGTTGATGAATTTTATGGCAAA
GCGCTCAAAGAACGCTACAATATTACGCTCAATCGCGTGCCAGTCGCTGATACTGTCGATGTGGTCAATCAGTTGCTCAG
CGAAAAAGAGGCAGGCAAAACCAGCGGTGCTGTCGATTTGATTTGGATCAATGGCGAGAATTTTGCTTCGTTGAAACAAG
CCAAACTCTTACGCGGCGATTGGGGCCAAAGCCTGCCCAACAGCCAATATGTCAACTGGAACAATCCAGCGGTTAATCTT
GATTTTGGCGAGCCAGTCGAAAGCCTCGAAAGCCCATGGTCATCGGCCCAATTTCAGTTGATTTACGATTCGGCTAAACT
TCAAGCCAGCGATTTGCCCCGTTCGTATGCTGCGCTCAAGGAGTATGCCTGCGCCAATCCGGGCAAAGTCAGCTATATCG
CACCTGGGCCAGGCGCATTTCAAGGCACCCGCTTTGTTAAACAAGCCTTATTTGAGATCAGCGGCGGCGCTGAACAATGG
CTCGGAGCCTTCAATCAGCAATTATGGGATCAATGGTCGCCCAAGTTGTGGGAATATTTCAATGATTTAGAAGGCTGTTT
GTGGCGCGAAGGCAGCACCTACCCCAAAACCGAGAACGAATTACATAGCTTGTTTGCCAATGGCGAAGTTGATTTTTCAA
TCACCCAAGCGATCGCCGGAGCTGGCTCGTTGATCAAGGAAAATTTAGTGCCAGCGAGTGCGCGAGCATTTGTATTCGAT
GATAATATGATCGGCGATTTCAACTATGTCGCCATCCCCAGCACCGCACCAAATCCAGCGGCAGCTTTGGTATTAGCCAA
TTTGATTCTCGACCCTCAACTACAAGCAGCCCAAATTTTGCCAGAAAATGGCTTTGGCTTGGGCTATGGCATCGACCCAA
CCAAGGTCAGTGATCCAGCTTTGGCAGCTAAATTGGCGAGTGCCGCCCAACAACTGGGCGACCCAGCAACGCCTGCCAGC
GATTTGGCAAAATCGTTGCGCAGCGATATTGCCGCTGAATATCAAAGCTTGATCGAACAGGGCTGGGATGCCAATGTGTT
GCGTAAGTAG

Upstream 100 bases:

>100_bases
GCTCGATCGTTATTTTTATCATCAGTATCGCGATTTCGCGCTGGCTTAAGCGCCGTGAAGCCGCTAAACCAGCGGCCTAG
CCGAGGGTAAACACACACTT

Downstream 100 bases:

>100_bases
TTGCAATGGCTAAATGGCGCAGCTGGCTTGGATTAGCGCCAGCAAGCATCATTATGCTTGGTTTATTTGGTAGTAGCCTT
GGCTATGGCATCGCCCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MQATARKRIWNLGLLIGLLSLIIASCGSNTATPTSAPSSTSLDLSNWTSIEQAANGQTVNWYMWGGSDSINRFVDEFYGK
ALKERYNITLNRVPVADTVDVVNQLLSEKEAGKTSGAVDLIWINGENFASLKQAKLLRGDWGQSLPNSQYVNWNNPAVNL
DFGEPVESLESPWSSAQFQLIYDSAKLQASDLPRSYAALKEYACANPGKVSYIAPGPGAFQGTRFVKQALFEISGGAEQW
LGAFNQQLWDQWSPKLWEYFNDLEGCLWREGSTYPKTENELHSLFANGEVDFSITQAIAGAGSLIKENLVPASARAFVFD
DNMIGDFNYVAIPSTAPNPAAALVLANLILDPQLQAAQILPENGFGLGYGIDPTKVSDPALAAKLASAAQQLGDPATPAS
DLAKSLRSDIAAEYQSLIEQGWDANVLRK

Sequences:

>Translated_429_residues
MQATARKRIWNLGLLIGLLSLIIASCGSNTATPTSAPSSTSLDLSNWTSIEQAANGQTVNWYMWGGSDSINRFVDEFYGK
ALKERYNITLNRVPVADTVDVVNQLLSEKEAGKTSGAVDLIWINGENFASLKQAKLLRGDWGQSLPNSQYVNWNNPAVNL
DFGEPVESLESPWSSAQFQLIYDSAKLQASDLPRSYAALKEYACANPGKVSYIAPGPGAFQGTRFVKQALFEISGGAEQW
LGAFNQQLWDQWSPKLWEYFNDLEGCLWREGSTYPKTENELHSLFANGEVDFSITQAIAGAGSLIKENLVPASARAFVFD
DNMIGDFNYVAIPSTAPNPAAALVLANLILDPQLQAAQILPENGFGLGYGIDPTKVSDPALAAKLASAAQQLGDPATPAS
DLAKSLRSDIAAEYQSLIEQGWDANVLRK
>Mature_429_residues
MQATARKRIWNLGLLIGLLSLIIASCGSNTATPTSAPSSTSLDLSNWTSIEQAANGQTVNWYMWGGSDSINRFVDEFYGK
ALKERYNITLNRVPVADTVDVVNQLLSEKEAGKTSGAVDLIWINGENFASLKQAKLLRGDWGQSLPNSQYVNWNNPAVNL
DFGEPVESLESPWSSAQFQLIYDSAKLQASDLPRSYAALKEYACANPGKVSYIAPGPGAFQGTRFVKQALFEISGGAEQW
LGAFNQQLWDQWSPKLWEYFNDLEGCLWREGSTYPKTENELHSLFANGEVDFSITQAIAGAGSLIKENLVPASARAFVFD
DNMIGDFNYVAIPSTAPNPAAALVLANLILDPQLQAAQILPENGFGLGYGIDPTKVSDPALAAKLASAAQQLGDPATPAS
DLAKSLRSDIAAEYQSLIEQGWDANVLRK

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=335, Percent_Identity=37.910447761194, Blast_Score=191, Evalue=9e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46525; Mature: 46525

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATARKRIWNLGLLIGLLSLIIASCGSNTATPTSAPSSTSLDLSNWTSIEQAANGQTVN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCHHHHHHCCCCEEE
WYMWGGSDSINRFVDEFYGKALKERYNITLNRVPVADTVDVVNQLLSEKEAGKTSGAVDL
EEEECCCCHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEE
IWINGENFASLKQAKLLRGDWGQSLPNSQYVNWNNPAVNLDFGEPVESLESPWSSAQFQL
EEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCCCCHHHHHCCCCCCEEEE
IYDSAKLQASDLPRSYAALKEYACANPGKVSYIAPGPGAFQGTRFVKQALFEISGGAEQW
EECCCCCCHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHH
LGAFNQQLWDQWSPKLWEYFNDLEGCLWREGSTYPKTENELHSLFANGEVDFSITQAIAG
HHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AGSLIKENLVPASARAFVFDDNMIGDFNYVAIPSTAPNPAAALVLANLILDPQLQAAQIL
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHC
PENGFGLGYGIDPTKVSDPALAAKLASAAQQLGDPATPASDLAKSLRSDIAAEYQSLIEQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GWDANVLRK
CCCCHHCCC
>Mature Secondary Structure
MQATARKRIWNLGLLIGLLSLIIASCGSNTATPTSAPSSTSLDLSNWTSIEQAANGQTVN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCHHHHHHCCCCEEE
WYMWGGSDSINRFVDEFYGKALKERYNITLNRVPVADTVDVVNQLLSEKEAGKTSGAVDL
EEEECCCCHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEE
IWINGENFASLKQAKLLRGDWGQSLPNSQYVNWNNPAVNLDFGEPVESLESPWSSAQFQL
EEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCCCCHHHHHCCCCCCEEEE
IYDSAKLQASDLPRSYAALKEYACANPGKVSYIAPGPGAFQGTRFVKQALFEISGGAEQW
EECCCCCCHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHH
LGAFNQQLWDQWSPKLWEYFNDLEGCLWREGSTYPKTENELHSLFANGEVDFSITQAIAG
HHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AGSLIKENLVPASARAFVFDDNMIGDFNYVAIPSTAPNPAAALVLANLILDPQLQAAQIL
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHC
PENGFGLGYGIDPTKVSDPALAAKLASAAQQLGDPATPASDLAKSLRSDIAAEYQSLIEQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GWDANVLRK
CCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]