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The map label for this gene is potI [H]

Identifier: 159897763

GI number: 159897763

Start: 1438511

End: 1439296

Strand: Reverse

Name: potI [H]

Synonym: Haur_1234

Alternate gene names: 159897763

Gene position: 1439296-1438511 (Counterclockwise)

Preceding gene: 159897764

Following gene: 159897762

Centisome position: 22.68

GC content: 52.67

Gene sequence:

>786_bases
ATGAGTTATCGCAAACTGGTGTTGCTTTTAGCGTTCCTATTAATTGTGCCAATCGCAATTTTTTTGGTGTATGCCTTTGC
CCAAGGCTGGTTTTTTCCGGCGCTATGGCCCGAACGCTGGGATAGCGAGCTATTTCTGCGGCAATTGCGCGATCCACAGG
TACGGCGTGGGTTTGAACAAAGCTTGGTCGTCGCGACAGGCGTGAGTGGTTTAGCGCTACTGCTAGGCTATCCAGCGGCA
CGCGTGTTGGAATTGCAGCAATTTCGCGGGCGTGGCCTGATCTATGGCTTGTTTTTTCTGCCGACGGTCGTGCCCAGCGT
TGCTACAGGCATCGGCTTGAACATTGTATTTTTGCGGCTGGACTTGGCTGGCACGCTATTTGGGGTGATGTTGGTGCATT
TGATCCCAGTTTTGCCGTATGTGGTGCTGACCTTGGGCAGTAGTTTGGCCCATTATGATCGCAATTATGAACATCAAGCA
GCGGTTTTGGGCGCTAGCCCCTGGCTGGTATTTTGGCGAGTCAGCCTGCCTTTGCTCTTGCCAAGTTTGGTGGTGGCTGG
TGTATTGGCATTTTTGATTTCGTGGAGCCAATATGTGCTGAGTTTGCTAATCGGCGGCGGCAAGATTATCACCCTGCCAA
TGCTGTTATTTTCGGCAGCCAGCGGCGGCAACTATAGCCTGATCGCCAGTTTAAGCCTGATTTTTATTGCGCCGCTCTTG
CTGTTGCTCGGCTTGGTGGCTCGCTACTTGGGTTCGCCAGCAACAGGAGCAACGCCACGGCCATGA

Upstream 100 bases:

>100_bases
ATTTGCAAGCGCGAGCTGAGGGTATGGCCGTAAGCATGCTGATGAGTTTAATTATTCTGGCAGTGGTGGGCTTGGCTTGG
CGTTGGCGGGAGCAGCGCTG

Downstream 100 bases:

>100_bases
GTTATTTGCAACTTGATCAATTAACTAAATCGTATGCTCAGCAGACCATTCTCCAAAATATCAATTTAAATTTAAACCAA
GGTGAATTTTTGGCCTTGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSYRKLVLLLAFLLIVPIAIFLVYAFAQGWFFPALWPERWDSELFLRQLRDPQVRRGFEQSLVVATGVSGLALLLGYPAA
RVLELQQFRGRGLIYGLFFLPTVVPSVATGIGLNIVFLRLDLAGTLFGVMLVHLIPVLPYVVLTLGSSLAHYDRNYEHQA
AVLGASPWLVFWRVSLPLLLPSLVVAGVLAFLISWSQYVLSLLIGGGKIITLPMLLFSAASGGNYSLIASLSLIFIAPLL
LLLGLVARYLGSPATGATPRP

Sequences:

>Translated_261_residues
MSYRKLVLLLAFLLIVPIAIFLVYAFAQGWFFPALWPERWDSELFLRQLRDPQVRRGFEQSLVVATGVSGLALLLGYPAA
RVLELQQFRGRGLIYGLFFLPTVVPSVATGIGLNIVFLRLDLAGTLFGVMLVHLIPVLPYVVLTLGSSLAHYDRNYEHQA
AVLGASPWLVFWRVSLPLLLPSLVVAGVLAFLISWSQYVLSLLIGGGKIITLPMLLFSAASGGNYSLIASLSLIFIAPLL
LLLGLVARYLGSPATGATPRP
>Mature_260_residues
SYRKLVLLLAFLLIVPIAIFLVYAFAQGWFFPALWPERWDSELFLRQLRDPQVRRGFEQSLVVATGVSGLALLLGYPAAR
VLELQQFRGRGLIYGLFFLPTVVPSVATGIGLNIVFLRLDLAGTLFGVMLVHLIPVLPYVVLTLGSSLAHYDRNYEHQAA
VLGASPWLVFWRVSLPLLLPSLVVAGVLAFLISWSQYVLSLLIGGGKIITLPMLLFSAASGGNYSLIASLSLIFIAPLLL
LLGLVARYLGSPATGATPRP

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787081, Length=268, Percent_Identity=30.5970149253731, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787368, Length=224, Percent_Identity=25.4464285714286, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28489; Mature: 28357

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SYRKLVLLLAFLLIVPIAIFLVYAFAQGWFFPALWPERWDSELFLRQLRDPQVRRGFEQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCCHHHHCCHHH
SLVVATGVSGLALLLGYPAARVLELQQFRGRGLIYGLFFLPTVVPSVATGIGLNIVFLRL
HHHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DLAGTLFGVMLVHLIPVLPYVVLTLGSSLAHYDRNYEHQAAVLGASPWLVFWRVSLPLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
PSLVVAGVLAFLISWSQYVLSLLIGGGKIITLPMLLFSAASGGNYSLIASLSLIFIAPLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLLGLVARYLGSPATGATPRP
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]