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The map label for this gene is aglF [H]

Identifier: 159897708

GI number: 159897708

Start: 1352611

End: 1353714

Strand: Reverse

Name: aglF [H]

Synonym: Haur_1179

Alternate gene names: 159897708

Gene position: 1353714-1352611 (Counterclockwise)

Preceding gene: 159897709

Following gene: 159897707

Centisome position: 21.33

GC content: 48.73

Gene sequence:

>1104_bases
ATGTCATCACAACCACAAACTAGCACAAACACTGAGCCACGCTCACGTAACAACGTCGGGCTGGCCCAGATGCTGCTTGT
CCCTCTCGCGTTATTAATCTCAATCTTGGTCGGGCGTTGGAGCCTTGGCGTTATGAAAGATGCCGAAGCGCCACGGTTGT
TGGTGGTTGGGGTGGCCTTGCTCGTCGGGGTCTTTGGGATCTGGATTGCCTACTGGCTCTGTAACGAGTTGCTCAATCTG
ATTCCTTCTGAGACGCTGCGCGAGAAGATTCGCCCAATAATTTTTGTTGGCCCAGCCTTGGCCTTGCTGATTATCTACTT
GGTTTATCCAACCGTGATGACGGCCTACTATAGTGTGCTCGACAAAAATAGCGAGGCCTTTGTTGGCCTTGATAACTACA
CATTTGCCTTCAAAAATCGCACCATCCAAATCGCACTGCGCAATAATCTCTACTGGATTGTTGGCGTAACCACATTTAGC
GTGGTTGGTGGCTTGATTATGGCGGTGCTGTTCGATAAAGTGCGCTATGAATCAGTTGCCAAATCGATGATCTTCTTGCC
AATGATTATTTCGTTCGTTGGCGCAGGTGTGATTTGGCGCTTTATGTATGCCAGTAACCCGCCCGGTGTGGGCTTATTGA
ATGCTTTTATCGGCAATTTCGACTATAAACCAGTTGCATGGCTGATCAATAAGAGCGTTAATAATATTTCGTTGATCGTG
ATTATGATTTGGCTACAAACTGGCTTTTGTCTGGTGATTCTCTCAGCAGCACTCAAGGCGATTCCTGCCGATATCATCGA
TGCAGCCCGGGTAGACGGCGCAGGCGAACTCGACATCTTCTGGCGAATTATCATTCCTTCGCTCAAAACCACAATTTTGA
CGGTGGTGACGACGGTCGTGATCGCGGTGTTGAAGGTATTCGACATTGTGTTTGTGATGACCAACGGCAACTACGAAACC
GAAGTGATCGCCAACCGCATGTTTACCGAGTTCTTCCGCAACCAAAACTATGGCCTAAGTAGTGCCTTAACCATGATTTT
GGTGATCGCCGTGCTGCCAGTGATGATTATTAATGTGCGGAACGCCCGCCGTCAGCGAGGGTAA

Upstream 100 bases:

>100_bases
GAGAACAGCGGAATCGACCAGATTCATTTGTTCTCTGGACTCTGTTCTCGGTAATCGCACAGTGCCTTGGTAGCACTGTT
CCTCAGCAAGGAGTTGTGGC

Downstream 100 bases:

>100_bases
TCATGCGTATCCAACGTTTTTTCTCACGTTCATTTGTTCACTTCGCAGTTATTACGATTGCCTTTCTCTGGACACTACCA
ACCGTCGGCGTGTTAGTTAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSSQPQTSTNTEPRSRNNVGLAQMLLVPLALLISILVGRWSLGVMKDAEAPRLLVVGVALLVGVFGIWIAYWLCNELLNL
IPSETLREKIRPIIFVGPALALLIIYLVYPTVMTAYYSVLDKNSEAFVGLDNYTFAFKNRTIQIALRNNLYWIVGVTTFS
VVGGLIMAVLFDKVRYESVAKSMIFLPMIISFVGAGVIWRFMYASNPPGVGLLNAFIGNFDYKPVAWLINKSVNNISLIV
IMIWLQTGFCLVILSAALKAIPADIIDAARVDGAGELDIFWRIIIPSLKTTILTVVTTVVIAVLKVFDIVFVMTNGNYET
EVIANRMFTEFFRNQNYGLSSALTMILVIAVLPVMIINVRNARRQRG

Sequences:

>Translated_367_residues
MSSQPQTSTNTEPRSRNNVGLAQMLLVPLALLISILVGRWSLGVMKDAEAPRLLVVGVALLVGVFGIWIAYWLCNELLNL
IPSETLREKIRPIIFVGPALALLIIYLVYPTVMTAYYSVLDKNSEAFVGLDNYTFAFKNRTIQIALRNNLYWIVGVTTFS
VVGGLIMAVLFDKVRYESVAKSMIFLPMIISFVGAGVIWRFMYASNPPGVGLLNAFIGNFDYKPVAWLINKSVNNISLIV
IMIWLQTGFCLVILSAALKAIPADIIDAARVDGAGELDIFWRIIIPSLKTTILTVVTTVVIAVLKVFDIVFVMTNGNYET
EVIANRMFTEFFRNQNYGLSSALTMILVIAVLPVMIINVRNARRQRG
>Mature_366_residues
SSQPQTSTNTEPRSRNNVGLAQMLLVPLALLISILVGRWSLGVMKDAEAPRLLVVGVALLVGVFGIWIAYWLCNELLNLI
PSETLREKIRPIIFVGPALALLIIYLVYPTVMTAYYSVLDKNSEAFVGLDNYTFAFKNRTIQIALRNNLYWIVGVTTFSV
VGGLIMAVLFDKVRYESVAKSMIFLPMIISFVGAGVIWRFMYASNPPGVGLLNAFIGNFDYKPVAWLINKSVNNISLIVI
MIWLQTGFCLVILSAALKAIPADIIDAARVDGAGELDIFWRIIIPSLKTTILTVVTTVVIAVLKVFDIVFVMTNGNYETE
VIANRMFTEFFRNQNYGLSSALTMILVIAVLPVMIINVRNARRQRG

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=24.1496598639456, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790465, Length=258, Percent_Identity=23.6434108527132, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787570, Length=248, Percent_Identity=22.5806451612903, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40765; Mature: 40634

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQPQTSTNTEPRSRNNVGLAQMLLVPLALLISILVGRWSLGVMKDAEAPRLLVVGVAL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LVGVFGIWIAYWLCNELLNLIPSETLREKIRPIIFVGPALALLIIYLVYPTVMTAYYSVL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
DKNSEAFVGLDNYTFAFKNRTIQIALRNNLYWIVGVTTFSVVGGLIMAVLFDKVRYESVA
CCCCCEEEECCCEEEEEECCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KSMIFLPMIISFVGAGVIWRFMYASNPPGVGLLNAFIGNFDYKPVAWLINKSVNNISLIV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHH
IMIWLQTGFCLVILSAALKAIPADIIDAARVDGAGELDIFWRIIIPSLKTTILTVVTTVV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAVLKVFDIVFVMTNGNYETEVIANRMFTEFFRNQNYGLSSALTMILVIAVLPVMIINVR
HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NARRQRG
HHHCCCC
>Mature Secondary Structure 
SSQPQTSTNTEPRSRNNVGLAQMLLVPLALLISILVGRWSLGVMKDAEAPRLLVVGVAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LVGVFGIWIAYWLCNELLNLIPSETLREKIRPIIFVGPALALLIIYLVYPTVMTAYYSVL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
DKNSEAFVGLDNYTFAFKNRTIQIALRNNLYWIVGVTTFSVVGGLIMAVLFDKVRYESVA
CCCCCEEEECCCEEEEEECCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KSMIFLPMIISFVGAGVIWRFMYASNPPGVGLLNAFIGNFDYKPVAWLINKSVNNISLIV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHH
IMIWLQTGFCLVILSAALKAIPADIIDAARVDGAGELDIFWRIIIPSLKTTILTVVTTVV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAVLKVFDIVFVMTNGNYETEVIANRMFTEFFRNQNYGLSSALTMILVIAVLPVMIINVR
HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NARRQRG
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]