| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897693
Identifier: 159897693
GI number: 159897693
Start: 1337382
End: 1337669
Strand: Reverse
Name: 159897693
Synonym: Haur_1164
Alternate gene names: NA
Gene position: 1337669-1337382 (Counterclockwise)
Preceding gene: 159897694
Following gene: 159897692
Centisome position: 21.08
GC content: 48.61
Gene sequence:
>288_bases TTGAGCGAACAGATTGATCCTGAACTGGAAGAGCTTGAGACCGAACCCGCCCCGCGTAAAACCAATGCCGTCGAGGATGA AGCCTTCGATTACTCCGTCAGTAAAGCTGGCAAAGTCTTTATTAGTTGGTATGGCAAGCAAGTGCTGATTTTGAGTGGAG CCAAAGCCCAACACTTTCTCGCCAACATCGCCAACCTTGATGGTGAAGCTGCCCAACTGGTGATGGCTAAAATCACTGGT AATTTTAAACGAGGCAACGAACGGCTCGCCAAACAAAAACGCCACTAA
Upstream 100 bases:
>100_bases ATTCTTTTGGGCTTATGGGCGGTGGTCGAACTTGGCTGGCTGGCGGCAATTCCTCCTGAAGTGCGCCGACGCTAATTTTT TTGCCAAGGAGTCGCCAACG
Downstream 100 bases:
>100_bases TTTGTTAGCTAATTGCAATCATCCCTGCTTGGAATCATTAGCCATAGCAGGGATACTTGAATCAATCGAAATGCCCCAAG GATTGTTGTGTGTTGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSEQIDPELEELETEPAPRKTNAVEDEAFDYSVSKAGKVFISWYGKQVLILSGAKAQHFLANIANLDGEAAQLVMAKITG NFKRGNERLAKQKRH
Sequences:
>Translated_95_residues MSEQIDPELEELETEPAPRKTNAVEDEAFDYSVSKAGKVFISWYGKQVLILSGAKAQHFLANIANLDGEAAQLVMAKITG NFKRGNERLAKQKRH >Mature_94_residues SEQIDPELEELETEPAPRKTNAVEDEAFDYSVSKAGKVFISWYGKQVLILSGAKAQHFLANIANLDGEAAQLVMAKITGN FKRGNERLAKQKRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10589; Mature: 10458
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQIDPELEELETEPAPRKTNAVEDEAFDYSVSKAGKVFISWYGKQVLILSGAKAQHFL CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCHHHHH ANIANLDGEAAQLVMAKITGNFKRGNERLAKQKRH HHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCC >Mature Secondary Structure SEQIDPELEELETEPAPRKTNAVEDEAFDYSVSKAGKVFISWYGKQVLILSGAKAQHFL CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCHHHHH ANIANLDGEAAQLVMAKITGNFKRGNERLAKQKRH HHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA