| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is phoQ [C]
Identifier: 159897690
GI number: 159897690
Start: 1333384
End: 1334664
Strand: Reverse
Name: phoQ [C]
Synonym: Haur_1161
Alternate gene names: 159897690
Gene position: 1334664-1333384 (Counterclockwise)
Preceding gene: 159897691
Following gene: 159897689
Centisome position: 21.03
GC content: 48.56
Gene sequence:
>1281_bases ATGCTCAAAACGATCATTAATCGAGCCAAAAATCATGCCGATCCTGCTATTGTAGTTCATTATCAACACCTGCTGGAGCA CAACAAACGCCGCTTGATCGAGTGGATTATGCTGTTAGCTGGTGGTTTGGCTTTGCCATTTACGCTTGTATTAATCGTAG CGGTGGCCAATCATCAGCAGCCAAGTAGTGTTTTGGTTTTACACCTTACCCGTAGCCTGCTCAATCCTTTACTAGTTTGG TGGTTGCTACAGCGTAAACAAATTAATTGGGCTTGGCATTCTACGATGGTGTTTGCAATGGCACATAATACGGTTTTAGC CTATGTGATGCACTTGCCAAATGTAATTATTGTAGAGCTGTTTGCGTTGGCCGGTTTTGCGGTGGTGATGCCATTTTGGC AGGTGTTGGCGTACATTGGCGGGCTGATTGGGCTGAATTATTGCTTTGCAGGGCAATTTATTGTGCTCAATGAATGGGCT TTGGTGATGATTGTCGTGCTGAGTATTGTGTTGATGTGCAGTACGATTGGCTTTGTTTCGCGCCAAACCTTGTGGCATGC CAGCCAACAACATAGCCAAACCGCTGAGTTGGTGCAACAACAGAGCAGCATGCAACAGCAACTTCACGATTTACAAACCC ATGTGCAACAACTGAGTTTGCTGAAACACGATTTGCGCCAGCCCTTGAAAAGCGTTCAAGGCTTGTTGCAAGGCTTGGCT TTTGAACAACCAAGCACGCATAGCACGATTCAGCCAGCGCTAGCCGCAACCCAACGAGTCGAACGTCAACTTAATAATTT GCTCGATCAAGCCCGTCAGCAGCTTGGTCGCCAACGGGCAAGCCTCGAAATCATCGATGTACAGCACTGTTTGGGGCAAT TGCAGCCAGCAATCAGCGGTTTGGCGGCCTACTACAGCGAGCCAATTGTCAAAGTGCAACTTGAAATTGACGCGGGCAGC GTGATTGTGGCCGATCGTGAGCAATTTGAGCGAGCCTTATTCAACTTGCTCGATAATAGTTTGAGCCGTTGCCATCACGA GGTACGTATCAGTAGCTATCGATCGGAGCAAAACGTGATAATCGAAGTTCGTGATGATGGGGCGGGCATGCATCAAGCCT TACGCACGGCGCTGAATCAGGCTGATTTTAGTGCGATTAAGCAAGGCTTGGGTTTGAAGCAAGTGCAACAGATGCTTACG CAGGCCCAAGCGTGGCTGCATGTGCCCGACGTTGCGATAGGCTGCACGCTTCAACTGCATTTTCCACAGGCTACCCAATG A
Upstream 100 bases:
>100_bases AGTGCTGGTTTGAATAGCCTGATGCTGTTTTGTTGCTTTGGCTGGCTGTTTGATCACGATTATCAGACGATGCTGGCTAG CCTCAAAAGACGGTTCAACA
Downstream 100 bases:
>100_bases ACTATTGCATTATCGTCGATGATCTGGCGGTCGATCGTCAGTTGGCGGCGCGTTATTTACAAGCAGCTGGCTATCAAACC AGCATGGCCCGTTCCAGCAA
Product: integral membrane sensor signal transduction histidine kinase
Products: Phosphorylated phoP [C]
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MLKTIINRAKNHADPAIVVHYQHLLEHNKRRLIEWIMLLAGGLALPFTLVLIVAVANHQQPSSVLVLHLTRSLLNPLLVW WLLQRKQINWAWHSTMVFAMAHNTVLAYVMHLPNVIIVELFALAGFAVVMPFWQVLAYIGGLIGLNYCFAGQFIVLNEWA LVMIVVLSIVLMCSTIGFVSRQTLWHASQQHSQTAELVQQQSSMQQQLHDLQTHVQQLSLLKHDLRQPLKSVQGLLQGLA FEQPSTHSTIQPALAATQRVERQLNNLLDQARQQLGRQRASLEIIDVQHCLGQLQPAISGLAAYYSEPIVKVQLEIDAGS VIVADREQFERALFNLLDNSLSRCHHEVRISSYRSEQNVIIEVRDDGAGMHQALRTALNQADFSAIKQGLGLKQVQQMLT QAQAWLHVPDVAIGCTLQLHFPQATQ
Sequences:
>Translated_426_residues MLKTIINRAKNHADPAIVVHYQHLLEHNKRRLIEWIMLLAGGLALPFTLVLIVAVANHQQPSSVLVLHLTRSLLNPLLVW WLLQRKQINWAWHSTMVFAMAHNTVLAYVMHLPNVIIVELFALAGFAVVMPFWQVLAYIGGLIGLNYCFAGQFIVLNEWA LVMIVVLSIVLMCSTIGFVSRQTLWHASQQHSQTAELVQQQSSMQQQLHDLQTHVQQLSLLKHDLRQPLKSVQGLLQGLA FEQPSTHSTIQPALAATQRVERQLNNLLDQARQQLGRQRASLEIIDVQHCLGQLQPAISGLAAYYSEPIVKVQLEIDAGS VIVADREQFERALFNLLDNSLSRCHHEVRISSYRSEQNVIIEVRDDGAGMHQALRTALNQADFSAIKQGLGLKQVQQMLT QAQAWLHVPDVAIGCTLQLHFPQATQ >Mature_426_residues MLKTIINRAKNHADPAIVVHYQHLLEHNKRRLIEWIMLLAGGLALPFTLVLIVAVANHQQPSSVLVLHLTRSLLNPLLVW WLLQRKQINWAWHSTMVFAMAHNTVLAYVMHLPNVIIVELFALAGFAVVMPFWQVLAYIGGLIGLNYCFAGQFIVLNEWA LVMIVVLSIVLMCSTIGFVSRQTLWHASQQHSQTAELVQQQSSMQQQLHDLQTHVQQLSLLKHDLRQPLKSVQGLLQGLA FEQPSTHSTIQPALAATQRVERQLNNLLDQARQQLGRQRASLEIIDVQHCLGQLQPAISGLAAYYSEPIVKVQLEIDAGS VIVADREQFERALFNLLDNSLSRCHHEVRISSYRSEQNVIIEVRDDGAGMHQALRTALNQADFSAIKQGLGLKQVQQMLT QAQAWLHVPDVAIGCTLQLHFPQATQ
Specific function: Member Of The Two-Component Regulatory System Phoq/Phop Involved In The Regulation Of Acid Phosphatase. Phoq May Function As A Membrane-Associated Protein Kinase That Phosphorylates Phop In Response To Environmental Signals. [C]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 47954; Mature: 47954
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTIINRAKNHADPAIVVHYQHLLEHNKRRLIEWIMLLAGGLALPFTLVLIVAVANHQQ CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC PSSVLVLHLTRSLLNPLLVWWLLQRKQINWAWHSTMVFAMAHNTVLAYVMHLPNVIIVEL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FALAGFAVVMPFWQVLAYIGGLIGLNYCFAGQFIVLNEWALVMIVVLSIVLMCSTIGFVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH RQTLWHASQQHSQTAELVQQQSSMQQQLHDLQTHVQQLSLLKHDLRQPLKSVQGLLQGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FEQPSTHSTIQPALAATQRVERQLNNLLDQARQQLGRQRASLEIIDVQHCLGQLQPAISG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LAAYYSEPIVKVQLEIDAGSVIVADREQFERALFNLLDNSLSRCHHEVRISSYRSEQNVI HHHHHCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IEVRDDGAGMHQALRTALNQADFSAIKQGLGLKQVQQMLTQAQAWLHVPDVAIGCTLQLH EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEE FPQATQ CCCCCC >Mature Secondary Structure MLKTIINRAKNHADPAIVVHYQHLLEHNKRRLIEWIMLLAGGLALPFTLVLIVAVANHQQ CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC PSSVLVLHLTRSLLNPLLVWWLLQRKQINWAWHSTMVFAMAHNTVLAYVMHLPNVIIVEL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FALAGFAVVMPFWQVLAYIGGLIGLNYCFAGQFIVLNEWALVMIVVLSIVLMCSTIGFVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH RQTLWHASQQHSQTAELVQQQSSMQQQLHDLQTHVQQLSLLKHDLRQPLKSVQGLLQGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FEQPSTHSTIQPALAATQRVERQLNNLLDQARQQLGRQRASLEIIDVQHCLGQLQPAISG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LAAYYSEPIVKVQLEIDAGSVIVADREQFERALFNLLDNSLSRCHHEVRISSYRSEQNVI HHHHHCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IEVRDDGAGMHQALRTALNQADFSAIKQGLGLKQVQQMLTQAQAWLHVPDVAIGCTLQLH EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEE FPQATQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phoP [C]
Specific reaction: phoP = Phosphorylated phoP [C]
General reaction: Phosphorylation [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA