| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897683
Identifier: 159897683
GI number: 159897683
Start: 1326004
End: 1328187
Strand: Direct
Name: 159897683
Synonym: Haur_1154
Alternate gene names: NA
Gene position: 1326004-1328187 (Clockwise)
Preceding gene: 159897682
Following gene: 159897684
Centisome position: 20.89
GC content: 51.33
Gene sequence:
>2184_bases ATGCGAAATGTTCAATTACGCATGCTCTTGCTTGTTGGGCTATTGGTGGGCTTGAGCGCTGGGGTCTGGCTGCGCCGACC AGTGGCCTATGCCGTGCCCAGCGCAACCAACCAAACCCTACCGCCACCAGCGCGGGTCGCGGTGACAACTCGTAGTTTCA ACAATGCTCGCACTGGCACAACCGCCGCCGAGCAATTACTAGCCCCAACTAATGTCATGTCCACTACTTTTGGCAAATTG TTCAGTCGCACCGTTGACGGCCAGATCTACGCTCAACCGTTGTATGTGCCCGATTTGAACATGCCTGGGGTTGGTATTCG CAACGTCGTTTTTGTGGCAACCCAGAAAAATAATGTTTATGCCTTCGATGCGGATGATCCGGCGATGAGCCAGCCATTAT GGTCACTCAACCTTGGGCCATACGCGATTAGCAATTTAAAAGAATTTGGCACGCGCTACAATGGTGGCGTGTACCAAGAT ATCAAGCCCTACGTTGGGATTACCGGCTCGCCAGTGATCGATCCGGCCACTAACACCCTCTATGTTGTACCGTTCATCCG CTTGGGAGCCTATCAATACCAGCATCGGATGATTGCGATCAACATTTTGGATGGCTCGCTTATCCAATCAACGACGATCC AAGGCTCGGTGCCAGGCGATGGCAACGATGCGAATCCCAATGATGGAATTGTCGTATTCGATAGCCGCCAGCATTTGCAA CGTTCGTCATTGCTGCTCGATGGCAATCGGGTGTACGTAGCATTTGCTGGCTATGCCGACACCGATCCCTATCATGGTTG GGTCTTTGGCTACAACAAAACGACCCTGCAACAAGAATTGATCTACAACACAACGCCGCAAAAAGAAGTTACTTCGCAGC CCAACGCCGCCAATGATGGCGAAGGTGGCATCTGGATGAGCGGGCAAGGCCTGACCAGCGATGGTCAGGGCAATTTGTAT CTTTCAATTGGCAACGGTAGCTGGAACGCCAATTTGCCCAATGGCCGCGATTATGGCTCGTCGGTCAACAAATTGAATGT AACTAATCCACTCTCACCAACTGTTGAGACATGGTTTACGCCTTACGATTACAAAACCCTCAATACCAACGACACCGACC TTGGCACAACTGGCGCGGTCTTAATTCCCAATACCAATGTGATGATCGCTGGCAGCAAGGGCGGCAAAATCTATGTCTTC AATCGCAACGATATGGGCGGTTTAGGCGTTCAGCAAGGCACAACTGGCTTTGATAAAACCGTGCCCGGCAAGTTCTATCA AAGCTTCAAGCCCCATGGTGGCTCGGGCTTCCGTGGGATCTTTGGCACACCAGTGGTTTGGGCAGCTGGTGGCGCAACTG GCACACGTATGTTTGTTTGGCCAGTCAATTCGCCATTGAAGGCCTTTCAATTTAGTACCACCCAGCCATTGACTCCAAGT TTTAATACCACGCCTGTAGCCACCAGCACCTTGCAAACCGTGACGATGCCAGGTGGAGTGATGTCATTGTCGTGGGATGG CAGCAACGCCAACACCGGGATCGTTTGGGCGACCCACTCGACTGGTGGCAGCGCCAATACTACCACCCAGCCAGGGGTGA TTCATGCTTATAACGCCTTGACCTTGCAAGAAACCTGGAATAGTAACCAAAACGCTACTCGCGATGCGATGGGCAATTTG GCCAAATTCAATACCCCATTAATTGCTGATGGTAAAGTCATCGTTGGTACATTCTCAGTCGATAGCATCACCAACACCGA TAAATTGGTGGTGTATGGCCATTTGGCTCCGCGAATTGTGCGCGAACCAGTTGATACCACAGTTTCGTTTGGTCAAAATG CCAGCGTTCATGTCACCGCAACTGGCGCGGCAAATCTCAGTTATCAATGGTATCGTGGCACAACTGGCGATACCAGCAAC CCAATCAGTGGCGCAACAATGCCAAGTTTAACCTTGACCAATGTCCAAACCAATAGCCAAGTCTGGGTGCGGGTCACTAA TCAGCAAGGCAATGTAAATAGCATTACCGCTAGCGTCATGGTGACCAATATTCCAACCAACACGCCAACAATTACCCCAA CACCGAGCAACACCCCGACCCCCAGCAATACCCCAACACCGAGCAACACCCCAGTTGTTAGCCAATGGAAGGTTTGGTTG CCAATGGCAATGCGAGGCCAATAA
Upstream 100 bases:
>100_bases TTTTCAAATCAAAAAATAAGCTTCCGATAACGATTGCAGTCCTGAATTGGATCAAGTATAGTTGCGCTATCCCTGTTCTT TTTTCAGAAGGAGCGCAACG
Downstream 100 bases:
>100_bases TGCTGATTGATCGTCAACTAGCGGCCCAACTAGAAGCAGCCGATGCACATAATTTGCGGCAATACACCGCTGCGGTAGCC CAAGTTGTGCCTGCTAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Legume Lectin Beta Domain Protein
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MRNVQLRMLLLVGLLVGLSAGVWLRRPVAYAVPSATNQTLPPPARVAVTTRSFNNARTGTTAAEQLLAPTNVMSTTFGKL FSRTVDGQIYAQPLYVPDLNMPGVGIRNVVFVATQKNNVYAFDADDPAMSQPLWSLNLGPYAISNLKEFGTRYNGGVYQD IKPYVGITGSPVIDPATNTLYVVPFIRLGAYQYQHRMIAINILDGSLIQSTTIQGSVPGDGNDANPNDGIVVFDSRQHLQ RSSLLLDGNRVYVAFAGYADTDPYHGWVFGYNKTTLQQELIYNTTPQKEVTSQPNAANDGEGGIWMSGQGLTSDGQGNLY LSIGNGSWNANLPNGRDYGSSVNKLNVTNPLSPTVETWFTPYDYKTLNTNDTDLGTTGAVLIPNTNVMIAGSKGGKIYVF NRNDMGGLGVQQGTTGFDKTVPGKFYQSFKPHGGSGFRGIFGTPVVWAAGGATGTRMFVWPVNSPLKAFQFSTTQPLTPS FNTTPVATSTLQTVTMPGGVMSLSWDGSNANTGIVWATHSTGGSANTTTQPGVIHAYNALTLQETWNSNQNATRDAMGNL AKFNTPLIADGKVIVGTFSVDSITNTDKLVVYGHLAPRIVREPVDTTVSFGQNASVHVTATGAANLSYQWYRGTTGDTSN PISGATMPSLTLTNVQTNSQVWVRVTNQQGNVNSITASVMVTNIPTNTPTITPTPSNTPTPSNTPTPSNTPVVSQWKVWL PMAMRGQ
Sequences:
>Translated_727_residues MRNVQLRMLLLVGLLVGLSAGVWLRRPVAYAVPSATNQTLPPPARVAVTTRSFNNARTGTTAAEQLLAPTNVMSTTFGKL FSRTVDGQIYAQPLYVPDLNMPGVGIRNVVFVATQKNNVYAFDADDPAMSQPLWSLNLGPYAISNLKEFGTRYNGGVYQD IKPYVGITGSPVIDPATNTLYVVPFIRLGAYQYQHRMIAINILDGSLIQSTTIQGSVPGDGNDANPNDGIVVFDSRQHLQ RSSLLLDGNRVYVAFAGYADTDPYHGWVFGYNKTTLQQELIYNTTPQKEVTSQPNAANDGEGGIWMSGQGLTSDGQGNLY LSIGNGSWNANLPNGRDYGSSVNKLNVTNPLSPTVETWFTPYDYKTLNTNDTDLGTTGAVLIPNTNVMIAGSKGGKIYVF NRNDMGGLGVQQGTTGFDKTVPGKFYQSFKPHGGSGFRGIFGTPVVWAAGGATGTRMFVWPVNSPLKAFQFSTTQPLTPS FNTTPVATSTLQTVTMPGGVMSLSWDGSNANTGIVWATHSTGGSANTTTQPGVIHAYNALTLQETWNSNQNATRDAMGNL AKFNTPLIADGKVIVGTFSVDSITNTDKLVVYGHLAPRIVREPVDTTVSFGQNASVHVTATGAANLSYQWYRGTTGDTSN PISGATMPSLTLTNVQTNSQVWVRVTNQQGNVNSITASVMVTNIPTNTPTITPTPSNTPTPSNTPTPSNTPVVSQWKVWL PMAMRGQ >Mature_727_residues MRNVQLRMLLLVGLLVGLSAGVWLRRPVAYAVPSATNQTLPPPARVAVTTRSFNNARTGTTAAEQLLAPTNVMSTTFGKL FSRTVDGQIYAQPLYVPDLNMPGVGIRNVVFVATQKNNVYAFDADDPAMSQPLWSLNLGPYAISNLKEFGTRYNGGVYQD IKPYVGITGSPVIDPATNTLYVVPFIRLGAYQYQHRMIAINILDGSLIQSTTIQGSVPGDGNDANPNDGIVVFDSRQHLQ RSSLLLDGNRVYVAFAGYADTDPYHGWVFGYNKTTLQQELIYNTTPQKEVTSQPNAANDGEGGIWMSGQGLTSDGQGNLY LSIGNGSWNANLPNGRDYGSSVNKLNVTNPLSPTVETWFTPYDYKTLNTNDTDLGTTGAVLIPNTNVMIAGSKGGKIYVF NRNDMGGLGVQQGTTGFDKTVPGKFYQSFKPHGGSGFRGIFGTPVVWAAGGATGTRMFVWPVNSPLKAFQFSTTQPLTPS FNTTPVATSTLQTVTMPGGVMSLSWDGSNANTGIVWATHSTGGSANTTTQPGVIHAYNALTLQETWNSNQNATRDAMGNL AKFNTPLIADGKVIVGTFSVDSITNTDKLVVYGHLAPRIVREPVDTTVSFGQNASVHVTATGAANLSYQWYRGTTGDTSN PISGATMPSLTLTNVQTNSQVWVRVTNQQGNVNSITASVMVTNIPTNTPTITPTPSNTPTPSNTPTPSNTPVVSQWKVWL PMAMRGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77887; Mature: 77887
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVQLRMLLLVGLLVGLSAGVWLRRPVAYAVPSATNQTLPPPARVAVTTRSFNNARTGT CCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCC TAAEQLLAPTNVMSTTFGKLFSRTVDGQIYAQPLYVPDLNMPGVGIRNVVFVATQKNNVY HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCEE AFDADDPAMSQPLWSLNLGPYAISNLKEFGTRYNGGVYQDIKPYVGITGSPVIDPATNTL EECCCCCHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE YVVPFIRLGAYQYQHRMIAINILDGSLIQSTTIQGSVPGDGNDANPNDGIVVFDSRQHLQ EEEEEHHHCCEEECCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHC RSSLLLDGNRVYVAFAGYADTDPYHGWVFGYNKTTLQQELIYNTTPQKEVTSQPNAANDG CCCEEEECCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHCCCCCCCCCC EGGIWMSGQGLTSDGQGNLYLSIGNGSWNANLPNGRDYGSSVNKLNVTNPLSPTVETWFT CCCEEECCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCEEECCCCCCCCHHHCCC PYDYKTLNTNDTDLGTTGAVLIPNTNVMIAGSKGGKIYVFNRNDMGGLGVQQGTTGFDKT CCCEEEECCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC VPGKFYQSFKPHGGSGFRGIFGTPVVWAAGGATGTRMFVWPVNSPLKAFQFSTTQPLTPS CCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCHHHEEECCCCCCCCC FNTTPVATSTLQTVTMPGGVMSLSWDGSNANTGIVWATHSTGGSANTTTQPGVIHAYNAL CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEE TLQETWNSNQNATRDAMGNLAKFNTPLIADGKVIVGTFSVDSITNTDKLVVYGHLAPRIV EEEECCCCCCCCCHHHHCCHHHCCCCEEECCEEEEEEEEECCCCCCCEEEEEECCCCHHH REPVDTTVSFGQNASVHVTATGAANLSYQWYRGTTGDTSNPISGATMPSLTLTNVQTNSQ HCCCCHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCE VWVRVTNQQGNVNSITASVMVTNIPTNTPTITPTPSNTPTPSNTPTPSNTPVVSQWKVWL EEEEEECCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEE PMAMRGQ EEEECCC >Mature Secondary Structure MRNVQLRMLLLVGLLVGLSAGVWLRRPVAYAVPSATNQTLPPPARVAVTTRSFNNARTGT CCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCC TAAEQLLAPTNVMSTTFGKLFSRTVDGQIYAQPLYVPDLNMPGVGIRNVVFVATQKNNVY HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCEE AFDADDPAMSQPLWSLNLGPYAISNLKEFGTRYNGGVYQDIKPYVGITGSPVIDPATNTL EECCCCCHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE YVVPFIRLGAYQYQHRMIAINILDGSLIQSTTIQGSVPGDGNDANPNDGIVVFDSRQHLQ EEEEEHHHCCEEECCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHC RSSLLLDGNRVYVAFAGYADTDPYHGWVFGYNKTTLQQELIYNTTPQKEVTSQPNAANDG CCCEEEECCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHCCCCCCCCCC EGGIWMSGQGLTSDGQGNLYLSIGNGSWNANLPNGRDYGSSVNKLNVTNPLSPTVETWFT CCCEEECCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCEEECCCCCCCCHHHCCC PYDYKTLNTNDTDLGTTGAVLIPNTNVMIAGSKGGKIYVFNRNDMGGLGVQQGTTGFDKT CCCEEEECCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC VPGKFYQSFKPHGGSGFRGIFGTPVVWAAGGATGTRMFVWPVNSPLKAFQFSTTQPLTPS CCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCHHHEEECCCCCCCCC FNTTPVATSTLQTVTMPGGVMSLSWDGSNANTGIVWATHSTGGSANTTTQPGVIHAYNAL CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEE TLQETWNSNQNATRDAMGNLAKFNTPLIADGKVIVGTFSVDSITNTDKLVVYGHLAPRIV EEEECCCCCCCCCHHHHCCHHHCCCCEEECCEEEEEEEEECCCCCCCEEEEEECCCCHHH REPVDTTVSFGQNASVHVTATGAANLSYQWYRGTTGDTSNPISGATMPSLTLTNVQTNSQ HCCCCHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCE VWVRVTNQQGNVNSITASVMVTNIPTNTPTITPTPSNTPTPSNTPTPSNTPVVSQWKVWL EEEEEECCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEE PMAMRGQ EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA