| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897679
Identifier: 159897679
GI number: 159897679
Start: 1320383
End: 1321708
Strand: Direct
Name: 159897679
Synonym: Haur_1150
Alternate gene names: NA
Gene position: 1320383-1321708 (Clockwise)
Preceding gene: 159897678
Following gene: 159897680
Centisome position: 20.8
GC content: 51.81
Gene sequence:
>1326_bases ATGCAACGACCATGGATTCGCTCGTTTACCTTGCTGATCGGCTTAATTTTGGCGGCATGTGGCGAGGCGACTACGCCAAC CACGCCCCCGACCAACCCAACTACGGCAACTGGCGCTAGCAGTGCGGCTAGTGGCACGGTCACGTTGTGGTTTCACTCCG GTCAAGGTGCTGAACGCGATGCCTTAAACGCAACGCTCCAAGCATTTGCAGCCAAAAACTCAGCAATCAAAGTTGAAGCC ATTGAATTGCCTGAAGGCGCATATAACGATCAAGTCAATGCTGCTGCCTTGGCTGGCGAATTGCCCTGCTTGCTCGATTT TGATGGCCCATTTGTCTATAACTATGCATGGTCGGGCTATTTGCAACCATTGGATAGTTTGATCGCTGCCGATGTCAAAG CCGATTTTCTGCCTTCAATCATTGAACAAGGCACTTACAACGGCAAATTGTATAGCCTTGGGCAGTTCGATTCGGGCTTA GGCTTCTATGCCAACAAGGAATTGTTGGAAAAAGCTGGGGTGCGCATTCCAACTTTAGCCCAGCCATGGACTCGCGCTGA GCTTGATGAGGCCTTGAGCGAACTTAAAGCCAATGGTTTGGAATATCCACTTGACTTGAAAATGGACTATGGCCGTGGCG AGTGGTTTAGTTATGGCTTTTCACCCTTCTTGCAATCTTTTGGCGGCGATTTGATCGATCGCTCAACGTATCAAAAAGCC AGCGGCAGCTTGAATAGCGCGGCTTCGGTCGAAGCAATGAAGTGGTTCCAAGGCCTCTTCACCAATGGCTATGTTAATCC TAAGCCTGCTGGCAGCACCGATTTTGCTGAGGGTAAAGCGGCTTTGAGTTGGGTTGGGCACTGGGCCTACCCTGATTATG CCAAAGCCTTGGGCGATAAATTGTTGGTGCTGCCTGCCGCCGATTTGGGCAAGGGTGCGAAAACGGGCATGGGTTCGTGG AATTGGGGCATTACCAGCAAGTGTGCTAATCCGGCGGCTGCCGCTGAAGTGCTTTCGTTCATCGTCTCGCCCGAAGAAGT GCTGCGCATGAGCGATGCCAATGGCGCTGTGCCAGCGCGTACTTCAGCAATTGCCAAATCCAAATTGTTTGGTGATGGCG CTCCGTTGAACCTCTATGTGCAACAATTGACCAATGGCGTTGCCATGCCGCGCCCAATTACCCCAGCCTACCCAGTCATT ACCGTCGCCTTTGCCGAAGCCGTCGATAACATTGTGGCTGGAGCCGATGTGCAAGCCGAGTTGGATAAAGCGGCCCAAAA GATCGATGCCGATATTGAAGATAATCAAGGCTATCCCGTGAAGTAA
Upstream 100 bases:
>100_bases CGTATGATATAGGAGGATACCTCGCCGCTGCCAATCTGCCGCATCCACCCAATTTCGCTGTTAGCTTGACGTTTGGTTTA ATCAATGAGGATGTACCACT
Downstream 100 bases:
>100_bases CTGTTGATCAACCACCAAGCCGTTGATTTCAGCGGCTTGGTGCTTCACAAGGAGTGTGTCTGATGGCTATTTCAAAATCG CAAACTGCCAGCGCCAAACC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Maltose/Maltodextrin Transporter; Sugar ABC Transporter Periplasmic Protein; Maltose/Maltodextrin Transport System; Trehalosemaltose ABC Transporter; Abc-Type Sugar Transport System Periplasmic Component
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MQRPWIRSFTLLIGLILAACGEATTPTTPPTNPTTATGASSAASGTVTLWFHSGQGAERDALNATLQAFAAKNSAIKVEA IELPEGAYNDQVNAAALAGELPCLLDFDGPFVYNYAWSGYLQPLDSLIAADVKADFLPSIIEQGTYNGKLYSLGQFDSGL GFYANKELLEKAGVRIPTLAQPWTRAELDEALSELKANGLEYPLDLKMDYGRGEWFSYGFSPFLQSFGGDLIDRSTYQKA SGSLNSAASVEAMKWFQGLFTNGYVNPKPAGSTDFAEGKAALSWVGHWAYPDYAKALGDKLLVLPAADLGKGAKTGMGSW NWGITSKCANPAAAAEVLSFIVSPEEVLRMSDANGAVPARTSAIAKSKLFGDGAPLNLYVQQLTNGVAMPRPITPAYPVI TVAFAEAVDNIVAGADVQAELDKAAQKIDADIEDNQGYPVK
Sequences:
>Translated_441_residues MQRPWIRSFTLLIGLILAACGEATTPTTPPTNPTTATGASSAASGTVTLWFHSGQGAERDALNATLQAFAAKNSAIKVEA IELPEGAYNDQVNAAALAGELPCLLDFDGPFVYNYAWSGYLQPLDSLIAADVKADFLPSIIEQGTYNGKLYSLGQFDSGL GFYANKELLEKAGVRIPTLAQPWTRAELDEALSELKANGLEYPLDLKMDYGRGEWFSYGFSPFLQSFGGDLIDRSTYQKA SGSLNSAASVEAMKWFQGLFTNGYVNPKPAGSTDFAEGKAALSWVGHWAYPDYAKALGDKLLVLPAADLGKGAKTGMGSW NWGITSKCANPAAAAEVLSFIVSPEEVLRMSDANGAVPARTSAIAKSKLFGDGAPLNLYVQQLTNGVAMPRPITPAYPVI TVAFAEAVDNIVAGADVQAELDKAAQKIDADIEDNQGYPVK >Mature_441_residues MQRPWIRSFTLLIGLILAACGEATTPTTPPTNPTTATGASSAASGTVTLWFHSGQGAERDALNATLQAFAAKNSAIKVEA IELPEGAYNDQVNAAALAGELPCLLDFDGPFVYNYAWSGYLQPLDSLIAADVKADFLPSIIEQGTYNGKLYSLGQFDSGL GFYANKELLEKAGVRIPTLAQPWTRAELDEALSELKANGLEYPLDLKMDYGRGEWFSYGFSPFLQSFGGDLIDRSTYQKA SGSLNSAASVEAMKWFQGLFTNGYVNPKPAGSTDFAEGKAALSWVGHWAYPDYAKALGDKLLVLPAADLGKGAKTGMGSW NWGITSKCANPAAAAEVLSFIVSPEEVLRMSDANGAVPARTSAIAKSKLFGDGAPLNLYVQQLTNGVAMPRPITPAYPVI TVAFAEAVDNIVAGADVQAELDKAAQKIDADIEDNQGYPVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46849; Mature: 46849
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRPWIRSFTLLIGLILAACGEATTPTTPPTNPTTATGASSAASGTVTLWFHSGQGAERD CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHH ALNATLQAFAAKNSAIKVEAIELPEGAYNDQVNAAALAGELPCLLDFDGPFVYNYAWSGY HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEEEHHHH LQPLDSLIAADVKADFLPSIIEQGTYNGKLYSLGQFDSGLGFYANKELLEKAGVRIPTLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCHHHHHHCCCCCCCCC QPWTRAELDEALSELKANGLEYPLDLKMDYGRGEWFSYGFSPFLQSFGGDLIDRSTYQKA CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCHHHHHHHHCCHHHHHHHHHHH SGSLNSAASVEAMKWFQGLFTNGYVNPKPAGSTDFAEGKAALSWVGHWAYPDYAKALGDK CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCC LLVLPAADLGKGAKTGMGSWNWGITSKCANPAAAAEVLSFIVSPEEVLRMSDANGAVPAR EEEEECHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCH TSAIAKSKLFGDGAPLNLYVQQLTNGVAMPRPITPAYPVITVAFAEAVDNIVAGADVQAE HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH LDKAAQKIDADIEDNQGYPVK HHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQRPWIRSFTLLIGLILAACGEATTPTTPPTNPTTATGASSAASGTVTLWFHSGQGAERD CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHH ALNATLQAFAAKNSAIKVEAIELPEGAYNDQVNAAALAGELPCLLDFDGPFVYNYAWSGY HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEEEHHHH LQPLDSLIAADVKADFLPSIIEQGTYNGKLYSLGQFDSGLGFYANKELLEKAGVRIPTLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCHHHHHHCCCCCCCCC QPWTRAELDEALSELKANGLEYPLDLKMDYGRGEWFSYGFSPFLQSFGGDLIDRSTYQKA CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCHHHHHHHHCCHHHHHHHHHHH SGSLNSAASVEAMKWFQGLFTNGYVNPKPAGSTDFAEGKAALSWVGHWAYPDYAKALGDK CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCC LLVLPAADLGKGAKTGMGSWNWGITSKCANPAAAAEVLSFIVSPEEVLRMSDANGAVPAR EEEEECHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCH TSAIAKSKLFGDGAPLNLYVQQLTNGVAMPRPITPAYPVITVAFAEAVDNIVAGADVQAE HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH LDKAAQKIDADIEDNQGYPVK HHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA