| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897631
Identifier: 159897631
GI number: 159897631
Start: 1262648
End: 1263487
Strand: Reverse
Name: 159897631
Synonym: Haur_1102
Alternate gene names: NA
Gene position: 1263487-1262648 (Counterclockwise)
Preceding gene: 159897632
Following gene: 159897626
Centisome position: 19.91
GC content: 44.29
Gene sequence:
>840_bases ATGTGGAATTTATTTCGGGCTGAATGGACTAAAACTTATAAACGCCCCGCCAATATTGGGCTATTGCTAATCACTTTGGC GATTATTTTGATCACCTTTGTGGCGCAAACTGGGATTGCCTTATACAACGGCAAAGAGGATACAGGGTGGACAGCAGCCC AATTCGCGATGATGTTTCCAAATGGGTTTCTCTTCCCTTCGATTATTTTGAGTGCGATTGGCTCAATGTTGGCTGTGGTG TTTATGGGCAATAGCATCGGCTCAGAGTATAGCCGTGATACCTGGAAAGTGCTCTTGCCACGCCGCGCTCGGCGCAGCGA TTTCATTATCGTTAAAATTGCCATCTGCTTGTTATTTATGATCTGCCTGATCATTATTTCGCTGATTTTCGGGCAATTGA TGGGTTTGATCGGCACGGCAATCTTAGGTGGCACGTTATTTGATTTTGATAGCTTTTCCTTGGGAACCTTGCTGAAATCG TTGATTCCAGTCTTATTGCAATTAGTGGTCTTTTCATCGATTACCTTGTTGGTAACCATGGCAGGCCGCTCGACGATTAT GGGGATTGTCTTTGGGATCGTTGGTAATACGATTTTCAACCTTGCCATGAGCTTTTCAACCTTGGCAGCCAAAATCTTAC CAAATGCCCATATCAGCAACCTTGAAGCCAATTGGTTATACACTGGCGAAGAGCAAACAATGATGTTTGAAGGGGTTGAT CGAGTCTTTGGCACACATATTTCATTAAGCACCAGCTTGATGGTTGTTGCAGCCTATATCTTTGGCTCAATTATGTTAGG AATTCTCTTGTTCCAGCGGCGGGATATGGCAGGTCAATAG
Upstream 100 bases:
>100_bases TGCGCCAGCGCTCGCTCGAATCGTTGTTCTTAGAAATTACTGGGACTGGCGGCGCGTCAGCCCAACAACCCTTGGCTGAA GTTGTGGTAGGAGGTCGCTA
Downstream 100 bases:
>100_bases TTCACAATTATCAAGAGGGTTTGAGCCGTGGTCTTCGTTGACCACGGTTTTTATTTAACGGAAGGCCAAGAGATCAAACA AGACTGCCGAAGCGGTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MWNLFRAEWTKTYKRPANIGLLLITLAIILITFVAQTGIALYNGKEDTGWTAAQFAMMFPNGFLFPSIILSAIGSMLAVV FMGNSIGSEYSRDTWKVLLPRRARRSDFIIVKIAICLLFMICLIIISLIFGQLMGLIGTAILGGTLFDFDSFSLGTLLKS LIPVLLQLVVFSSITLLVTMAGRSTIMGIVFGIVGNTIFNLAMSFSTLAAKILPNAHISNLEANWLYTGEEQTMMFEGVD RVFGTHISLSTSLMVVAAYIFGSIMLGILLFQRRDMAGQ
Sequences:
>Translated_279_residues MWNLFRAEWTKTYKRPANIGLLLITLAIILITFVAQTGIALYNGKEDTGWTAAQFAMMFPNGFLFPSIILSAIGSMLAVV FMGNSIGSEYSRDTWKVLLPRRARRSDFIIVKIAICLLFMICLIIISLIFGQLMGLIGTAILGGTLFDFDSFSLGTLLKS LIPVLLQLVVFSSITLLVTMAGRSTIMGIVFGIVGNTIFNLAMSFSTLAAKILPNAHISNLEANWLYTGEEQTMMFEGVD RVFGTHISLSTSLMVVAAYIFGSIMLGILLFQRRDMAGQ >Mature_279_residues MWNLFRAEWTKTYKRPANIGLLLITLAIILITFVAQTGIALYNGKEDTGWTAAQFAMMFPNGFLFPSIILSAIGSMLAVV FMGNSIGSEYSRDTWKVLLPRRARRSDFIIVKIAICLLFMICLIIISLIFGQLMGLIGTAILGGTLFDFDSFSLGTLLKS LIPVLLQLVVFSSITLLVTMAGRSTIMGIVFGIVGNTIFNLAMSFSTLAAKILPNAHISNLEANWLYTGEEQTMMFEGVD RVFGTHISLSTSLMVVAAYIFGSIMLGILLFQRRDMAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30668; Mature: 30668
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNLFRAEWTKTYKRPANIGLLLITLAIILITFVAQTGIALYNGKEDTGWTAAQFAMMFP CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCC NGFLFPSIILSAIGSMLAVVFMGNSIGSEYSRDTWKVLLPRRARRSDFIIVKIAICLLFM CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH ICLIIISLIFGQLMGLIGTAILGGTLFDFDSFSLGTLLKSLIPVLLQLVVFSSITLLVTM HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGRSTIMGIVFGIVGNTIFNLAMSFSTLAAKILPNAHISNLEANWLYTGEEQTMMFEGVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCHHHHHHHHH RVFGTHISLSTSLMVVAAYIFGSIMLGILLFQRRDMAGQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWNLFRAEWTKTYKRPANIGLLLITLAIILITFVAQTGIALYNGKEDTGWTAAQFAMMFP CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCC NGFLFPSIILSAIGSMLAVVFMGNSIGSEYSRDTWKVLLPRRARRSDFIIVKIAICLLFM CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH ICLIIISLIFGQLMGLIGTAILGGTLFDFDSFSLGTLLKSLIPVLLQLVVFSSITLLVTM HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGRSTIMGIVFGIVGNTIFNLAMSFSTLAAKILPNAHISNLEANWLYTGEEQTMMFEGVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCHHHHHHHHH RVFGTHISLSTSLMVVAAYIFGSIMLGILLFQRRDMAGQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA