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The map label for this gene is ynbD [C]

Identifier: 159897597

GI number: 159897597

Start: 1220351

End: 1220893

Strand: Reverse

Name: ynbD [C]

Synonym: Haur_1068

Alternate gene names: 159897597

Gene position: 1220893-1220351 (Counterclockwise)

Preceding gene: 159897603

Following gene: 159897596

Centisome position: 19.24

GC content: 51.57

Gene sequence:

>543_bases
ATGCTGGCAGTTTTGCAGCATTGGTTTTATGTTTTGCGCTCACATTTAGTCATGGGAACTCGCCGGCTCTATCGGCGGCT
TGGTGGCAAGGTTAAGCCGCGTACCAACCAAATTACCGAGCAACTCTACCTCGGCGGTTTTTTCGATCTCCACGATTGGC
AAATTTTACATGCCCAAGGTGTGCAGGTTGTAGTCAATCTCCAAGCCGAGCGCCAAGATCAGTTTGGCACGCTCGGCAAT
CAGGGCTACTTATGGCTGCCAACCATGGATCGCCAAGCACCTAGCCCTGAAGCACTACAACAAGGCGTGGTTTTTGTGCA
ACAAGCCATCCAGGCCGATCATAAAGTGTTGATCCATTGTCACGCTGGCATGAGCCGTTCGGCCACCTTATGTACAGCCG
TACTGATTGCCCAAGGCATGGATTTGGAAAGCGCATGGAATTTAGTTAAGGCGCGTCGCCCAATTGTTCACTTGCATCCC
TGGCAACGCCGAGCTTTAGAGCAATTTGCCCGCGATTGGGCACAGCAAGGAGCAGAATTATGA

Upstream 100 bases:

>100_bases
TAAAAAACGAAGGCCATTATAGCCTTAATCAGCTTGGTACAGCGTGGTACAATGGCTTGCGGTCGTTACTAACCGATAAA
AACTGATAAAGGATTGAGGT

Downstream 100 bases:

>100_bases
GTTTTGCGGGCAAAACCGCCATTATCACCGGAGCATCATCGGGTATTGGCAAGTTGATCGCTGAAGGTTTGGCGCGTGGC
GGAGCCAATGTGGTGCTCGC

Product: dual specificity protein phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLAVLQHWFYVLRSHLVMGTRRLYRRLGGKVKPRTNQITEQLYLGGFFDLHDWQILHAQGVQVVVNLQAERQDQFGTLGN
QGYLWLPTMDRQAPSPEALQQGVVFVQQAIQADHKVLIHCHAGMSRSATLCTAVLIAQGMDLESAWNLVKARRPIVHLHP
WQRRALEQFARDWAQQGAEL

Sequences:

>Translated_180_residues
MLAVLQHWFYVLRSHLVMGTRRLYRRLGGKVKPRTNQITEQLYLGGFFDLHDWQILHAQGVQVVVNLQAERQDQFGTLGN
QGYLWLPTMDRQAPSPEALQQGVVFVQQAIQADHKVLIHCHAGMSRSATLCTAVLIAQGMDLESAWNLVKARRPIVHLHP
WQRRALEQFARDWAQQGAEL
>Mature_180_residues
MLAVLQHWFYVLRSHLVMGTRRLYRRLGGKVKPRTNQITEQLYLGGFFDLHDWQILHAQGVQVVVNLQAERQDQFGTLGN
QGYLWLPTMDRQAPSPEALQQGVVFVQQAIQADHKVLIHCHAGMSRSATLCTAVLIAQGMDLESAWNLVKARRPIVHLHP
WQRRALEQFARDWAQQGAEL

Specific function: Unknown

COG id: COG2453

COG function: function code T; Predicted protein-tyrosine phosphatase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20639; Mature: 20639

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2 ; PS50054 TYR_PHOSPHATASE_DUAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVLQHWFYVLRSHLVMGTRRLYRRLGGKVKPRTNQITEQLYLGGFFDLHDWQILHAQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEECCCCEEEEECCC
VQVVVNLQAERQDQFGTLGNQGYLWLPTMDRQAPSPEALQQGVVFVQQAIQADHKVLIHC
EEEEEEECHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
HAGMSRSATLCTAVLIAQGMDLESAWNLVKARRPIVHLHPWQRRALEQFARDWAQQGAEL
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLAVLQHWFYVLRSHLVMGTRRLYRRLGGKVKPRTNQITEQLYLGGFFDLHDWQILHAQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEECCCCEEEEECCC
VQVVVNLQAERQDQFGTLGNQGYLWLPTMDRQAPSPEALQQGVVFVQQAIQADHKVLIHC
EEEEEEECHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
HAGMSRSATLCTAVLIAQGMDLESAWNLVKARRPIVHLHPWQRRALEQFARDWAQQGAEL
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA