Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897550

Identifier: 159897550

GI number: 159897550

Start: 1166336

End: 1166632

Strand: Direct

Name: 159897550

Synonym: Haur_1021

Alternate gene names: NA

Gene position: 1166336-1166632 (Clockwise)

Preceding gene: 159897549

Following gene: 159897551

Centisome position: 18.38

GC content: 42.76

Gene sequence:

>297_bases
ATGACTGTATATGTTTTAGTAACGTTGGCTGTGGTGAGTGGGGCCTTTTTGCTTGGGCGTTATCAAATTCTTAAGCGCAA
CGAACATATTGAAGCTTGGGCTATCGGTCAGCACTATCAAATTATCGAAATTAAGCGGCCTTGGCTCAATTTAGGGCCAT
TTCTCTGGCGCACTGGCGAAAACGACCAAGTGTACAAAATTGAATTACGTGATCAAACAGGCCAACAGATTGCAGGTTGG
TTGCGCTATCGCGGCTATTTCTTTGGCAACTATGAAATTGATTTGGAAGTTGAATAA

Upstream 100 bases:

>100_bases
GGATTAGCGGCCTATTCTCCGATCAACTTGATGTGCGCTTTGATTCGTAACGAACGGTTTGGATGAACGTATTGAGAGCA
AGTGTAAAGGAAGGATTGTT

Downstream 100 bases:

>100_bases
TGCTGTATGCTATATCATCATTTATACTGGGATTGATTGCTGTCCTTGGTCTGTATCTCAGCGTTAAGCAATCGCAGGCA
ATTAAGCAATCAATCAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTVYVLVTLAVVSGAFLLGRYQILKRNEHIEAWAIGQHYQIIEIKRPWLNLGPFLWRTGENDQVYKIELRDQTGQQIAGW
LRYRGYFFGNYEIDLEVE

Sequences:

>Translated_98_residues
MTVYVLVTLAVVSGAFLLGRYQILKRNEHIEAWAIGQHYQIIEIKRPWLNLGPFLWRTGENDQVYKIELRDQTGQQIAGW
LRYRGYFFGNYEIDLEVE
>Mature_97_residues
TVYVLVTLAVVSGAFLLGRYQILKRNEHIEAWAIGQHYQIIEIKRPWLNLGPFLWRTGENDQVYKIELRDQTGQQIAGWL
RYRGYFFGNYEIDLEVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11621; Mature: 11489

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYVLVTLAVVSGAFLLGRYQILKRNEHIEAWAIGQHYQIIEIKRPWLNLGPFLWRTGE
CEEEEEEEHHHHCCHHHHHHEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEEEECCC
NDQVYKIELRDQTGQQIAGWLRYRGYFFGNYEIDLEVE
CCCEEEEEECCCCCHHHHHHHHCCCEEECCEEEEEEEC
>Mature Secondary Structure 
TVYVLVTLAVVSGAFLLGRYQILKRNEHIEAWAIGQHYQIIEIKRPWLNLGPFLWRTGE
EEEEEEEHHHHCCHHHHHHEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEEEECCC
NDQVYKIELRDQTGQQIAGWLRYRGYFFGNYEIDLEVE
CCCEEEEEECCCCCHHHHHHHHCCCEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA