| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897524
Identifier: 159897524
GI number: 159897524
Start: 1139032
End: 1139403
Strand: Reverse
Name: 159897524
Synonym: Haur_0995
Alternate gene names: NA
Gene position: 1139403-1139032 (Counterclockwise)
Preceding gene: 159897525
Following gene: 159897523
Centisome position: 17.95
GC content: 50.0
Gene sequence:
>372_bases ATGCAACTAGATCATTCAGCATCACTTTTTAGCCCAACGCCTTTGGGACTTAAGTTAATTGGTTGGCGCTATTACCTCAG CGCGGCAACAACGGTCTACCCGCTCATCAAGAACAGTGCAGCCTTTGATTTAGGGCTATGGCTGTTTATGGGCGGGTTGT TTGGCACGATTGCTTGGCTGCTGGCTTGGGTTGGCAATGGACTGATCAAGCGCAAATCCGAAGCCCGCCGAACTGCGGTG ATACTTGAAGTGCTACGGATCATTGGTTGGTTATGGAACATGTCGTGGTTTGGGCTGATTGATTGGGTCGTAAGCTGGGT TTGCCTGTGGTATCTCACCCGCCAAAAGCTTGTAGCGTTGTGCAACCATTAA
Upstream 100 bases:
>100_bases TTACGCCCGATTGCTTAACCTTAAGCCGCCGATCTGCCAACAACATGCCGATCGGCGGCGTATTGAATTACGACTTATTG TATGAGAGAGGATAAACACG
Downstream 100 bases:
>100_bases GCAGATCGTGCGTATCAACCTGCGAACAATTAATCTGAAAGGGAGAGAATATGTATACGGTTCCCGTTAATAAACAGCAA ACCAAATTGCCCGCCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MQLDHSASLFSPTPLGLKLIGWRYYLSAATTVYPLIKNSAAFDLGLWLFMGGLFGTIAWLLAWVGNGLIKRKSEARRTAV ILEVLRIIGWLWNMSWFGLIDWVVSWVCLWYLTRQKLVALCNH
Sequences:
>Translated_123_residues MQLDHSASLFSPTPLGLKLIGWRYYLSAATTVYPLIKNSAAFDLGLWLFMGGLFGTIAWLLAWVGNGLIKRKSEARRTAV ILEVLRIIGWLWNMSWFGLIDWVVSWVCLWYLTRQKLVALCNH >Mature_123_residues MQLDHSASLFSPTPLGLKLIGWRYYLSAATTVYPLIKNSAAFDLGLWLFMGGLFGTIAWLLAWVGNGLIKRKSEARRTAV ILEVLRIIGWLWNMSWFGLIDWVVSWVCLWYLTRQKLVALCNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14101; Mature: 14101
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLDHSASLFSPTPLGLKLIGWRYYLSAATTVYPLIKNSAAFDLGLWLFMGGLFGTIAWL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAWVGNGLIKRKSEARRTAVILEVLRIIGWLWNMSWFGLIDWVVSWVCLWYLTRQKLVAL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CNH HCC >Mature Secondary Structure MQLDHSASLFSPTPLGLKLIGWRYYLSAATTVYPLIKNSAAFDLGLWLFMGGLFGTIAWL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAWVGNGLIKRKSEARRTAVILEVLRIIGWLWNMSWFGLIDWVVSWVCLWYLTRQKLVAL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CNH HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA