Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897521

Identifier: 159897521

GI number: 159897521

Start: 1137619

End: 1138032

Strand: Reverse

Name: 159897521

Synonym: Haur_0992

Alternate gene names: NA

Gene position: 1138032-1137619 (Counterclockwise)

Preceding gene: 159897522

Following gene: 159897518

Centisome position: 17.93

GC content: 35.99

Gene sequence:

>414_bases
ATGCAACAGATTCAGCAAGTAAAATATGGCAAAAAACCATTGGGAATTATGTTGATTGGTTTTATATTTGCAGCACGAGC
GACCTTTGCGGGCGGGATGATGTTGATTTTTGTACTGAGATTTCTTGATCTGCAGCCAGGCTATTTGCTGCCATATGGCT
TTATGGTGCTAGTTAGTGGGGCTTTTACATTTTTACATATCAAAATCGTCCAAGGGCTATTTGGTTTTCGTGAAAAAATG
AGAAACCTTGCGGTTATCTTAGAATTAATTATTGTGGTTTTATATTGGAGTTCACGATTTTTATTTGATTATGAGCCAGA
ACTAGCACAAACTATTTCGATAATAATTAGTATGGTAATTATTTGGTATTTATCGCGTGATAAAACTCGCGCATGGTTTG
CCCCAAACAAATAA

Upstream 100 bases:

>100_bases
TCATTATTCATTATTTGCAGCAACCGGAAATAATGGAGGTATTTCAGCCAGAAATAAATTAGTGCTTGAATATTGATAAA
AACAACGAGGAATAGTAAGT

Downstream 100 bases:

>100_bases
AATCGATCATTCATTAAGGTATAGAAATTCTAAAGTTATGCACGATGCTTAACCAATCACCACCCTTCCGTCCCGCCTCA
AGGCGGGAAACGCCGGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MQQIQQVKYGKKPLGIMLIGFIFAARATFAGGMMLIFVLRFLDLQPGYLLPYGFMVLVSGAFTFLHIKIVQGLFGFREKM
RNLAVILELIIVVLYWSSRFLFDYEPELAQTISIIISMVIIWYLSRDKTRAWFAPNK

Sequences:

>Translated_137_residues
MQQIQQVKYGKKPLGIMLIGFIFAARATFAGGMMLIFVLRFLDLQPGYLLPYGFMVLVSGAFTFLHIKIVQGLFGFREKM
RNLAVILELIIVVLYWSSRFLFDYEPELAQTISIIISMVIIWYLSRDKTRAWFAPNK
>Mature_137_residues
MQQIQQVKYGKKPLGIMLIGFIFAARATFAGGMMLIFVLRFLDLQPGYLLPYGFMVLVSGAFTFLHIKIVQGLFGFREKM
RNLAVILELIIVVLYWSSRFLFDYEPELAQTISIIISMVIIWYLSRDKTRAWFAPNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15864; Mature: 15864

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIQQVKYGKKPLGIMLIGFIFAARATFAGGMMLIFVLRFLDLQPGYLLPYGFMVLVSG
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AFTFLHIKIVQGLFGFREKMRNLAVILELIIVVLYWSSRFLFDYEPELAQTISIIISMVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHH
IWYLSRDKTRAWFAPNK
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQQIQQVKYGKKPLGIMLIGFIFAARATFAGGMMLIFVLRFLDLQPGYLLPYGFMVLVSG
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AFTFLHIKIVQGLFGFREKMRNLAVILELIIVVLYWSSRFLFDYEPELAQTISIIISMVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHH
IWYLSRDKTRAWFAPNK
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA