| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897507
Identifier: 159897507
GI number: 159897507
Start: 1121835
End: 1122230
Strand: Reverse
Name: 159897507
Synonym: Haur_0978
Alternate gene names: NA
Gene position: 1122230-1121835 (Counterclockwise)
Preceding gene: 159897514
Following gene: 159897505
Centisome position: 17.68
GC content: 45.2
Gene sequence:
>396_bases ATGTCGTTTCAGTATCCACTAGAAGTTCGTTTTCGCGATTTGGATGGGCTTGGGCATGTCAATAATGCGGTCTATTTGAC TTATTTTGAGACCTTGCGTTTACACTTTGCGCTCGAATTGTTGGGCGTAGCGCATTTGGCTGAAGTGCCGTTTATTTTAG GCGAAATTTCAGTGCGCTTTCTCAAGCCTGTGTTTTTTGGCGATCAACTCCAAGGCAGCGTCGATGTCTCGCGGATTGGG CATAAAAGCTTTACCATGATTTATACGATTAAGCGGGGCAACGAAATTGTGACCCAAGGCTCGACCGAATTAATCTGGTT TGATTACAAAACTCAACGTTCGGTGCCAATTCCCGATTCATTTCGCCAGCAAGTTGCCAGCTATCAACGTGCTTAA
Upstream 100 bases:
>100_bases AGATTGGCTGGCGACAAGGTTATCAACAACACCGAAATTTTGAGAAATTTGTTACAATATGCCTATATCTGTGTGTACTT TGGATGGTTGGAGGACATCG
Downstream 100 bases:
>100_bases TCCATCGACGCAATAGGTTGTTGAGTAACAATACAGTTAGCCCCTCATCCCGCTTTCGAGATGAGGGGCGCTAAGCCAGT GCTGCTATATTCCTACGGCG
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; 4-Hydroxybenzoyl-CoA Thioesterase; Thioesterase Family Protein Domain Protein; Thioesterase Protein; Thiesterase
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSFQYPLEVRFRDLDGLGHVNNAVYLTYFETLRLHFALELLGVAHLAEVPFILGEISVRFLKPVFFGDQLQGSVDVSRIG HKSFTMIYTIKRGNEIVTQGSTELIWFDYKTQRSVPIPDSFRQQVASYQRA
Sequences:
>Translated_131_residues MSFQYPLEVRFRDLDGLGHVNNAVYLTYFETLRLHFALELLGVAHLAEVPFILGEISVRFLKPVFFGDQLQGSVDVSRIG HKSFTMIYTIKRGNEIVTQGSTELIWFDYKTQRSVPIPDSFRQQVASYQRA >Mature_130_residues SFQYPLEVRFRDLDGLGHVNNAVYLTYFETLRLHFALELLGVAHLAEVPFILGEISVRFLKPVFFGDQLQGSVDVSRIGH KSFTMIYTIKRGNEIVTQGSTELIWFDYKTQRSVPIPDSFRQQVASYQRA
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15090; Mature: 14958
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQYPLEVRFRDLDGLGHVNNAVYLTYFETLRLHFALELLGVAHLAEVPFILGEISVRF CCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LKPVFFGDQLQGSVDVSRIGHKSFTMIYTIKRGNEIVTQGSTELIWFDYKTQRSVPIPDS HHHHHCCCCCCCCCCHHHCCCCEEEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCCHH FRQQVASYQRA HHHHHHHHCCC >Mature Secondary Structure SFQYPLEVRFRDLDGLGHVNNAVYLTYFETLRLHFALELLGVAHLAEVPFILGEISVRF CCCCCEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LKPVFFGDQLQGSVDVSRIGHKSFTMIYTIKRGNEIVTQGSTELIWFDYKTQRSVPIPDS HHHHHCCCCCCCCCCHHHCCCCEEEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCCHH FRQQVASYQRA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA