Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897483

Identifier: 159897483

GI number: 159897483

Start: 1094068

End: 1094538

Strand: Direct

Name: 159897483

Synonym: Haur_0954

Alternate gene names: NA

Gene position: 1094068-1094538 (Clockwise)

Preceding gene: 159897478

Following gene: 159897492

Centisome position: 17.24

GC content: 46.71

Gene sequence:

>471_bases
ATGAAACCAATTATTTTTGAAATTACCGGGGAGATCGAAGCCCCCGCCGAACTGGTGTATCAAATTATTGCTGATTATCG
CGATGGGCATCCACATATTGTGCCGAAGAAATATTTTAAAAGCCTGACAGTTGAGCAAGGCGGCATTGGCAAGGGCACGA
TTTTTGTCACTGAAACCGAAGCCTTTGGTCGCAAGCAAACCATGCGTATGCACGTGACCGAGCCAAGCCCAGGCAGTGTG
TTGGTCGAAACTGATTATGATTTGGGGATTATCACCACGTTTACGGTTACGCCCGATGGTGAAAATCGCTCGAAGCTAAC
TTTGCACACTCGATCTGAGCCAAAACCCGGCCTGATGGGTTTGATCGAGCGCTTTTTATCACCTGGATTGTTACGCAAGA
TGTATTTGGCCGAATTTGAGACCTTCAATCAATACCTGCGCAGCAATCAATATCGTGCCCAAAGTACCTAA

Upstream 100 bases:

>100_bases
GTCACAGATCGAGTTCCTGTTTCGTCTAGGTTAGGTCTGTTTGATTTTTGATCGATAGTAGCCTTTAATGCTTAAGTATT
TTAGTGAGGAGCTAAGTGCT

Downstream 100 bases:

>100_bases
CGATTGAGTACATACCCTCACCCCCAACCCCTCTCCCACTGCGGCGGGCGAGGGGCTTTCCAAACTTCATGATCGAGGGA
TTTCCCTCACCTCGCGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Polyketide Cyclase / Dehydrase And Lipid Transport

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKPIIFEITGEIEAPAELVYQIIADYRDGHPHIVPKKYFKSLTVEQGGIGKGTIFVTETEAFGRKQTMRMHVTEPSPGSV
LVETDYDLGIITTFTVTPDGENRSKLTLHTRSEPKPGLMGLIERFLSPGLLRKMYLAEFETFNQYLRSNQYRAQST

Sequences:

>Translated_156_residues
MKPIIFEITGEIEAPAELVYQIIADYRDGHPHIVPKKYFKSLTVEQGGIGKGTIFVTETEAFGRKQTMRMHVTEPSPGSV
LVETDYDLGIITTFTVTPDGENRSKLTLHTRSEPKPGLMGLIERFLSPGLLRKMYLAEFETFNQYLRSNQYRAQST
>Mature_156_residues
MKPIIFEITGEIEAPAELVYQIIADYRDGHPHIVPKKYFKSLTVEQGGIGKGTIFVTETEAFGRKQTMRMHVTEPSPGSV
LVETDYDLGIITTFTVTPDGENRSKLTLHTRSEPKPGLMGLIERFLSPGLLRKMYLAEFETFNQYLRSNQYRAQST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17672; Mature: 17672

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIIFEITGEIEAPAELVYQIIADYRDGHPHIVPKKYFKSLTVEQGGIGKGTIFVTETE
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECH
AFGRKQTMRMHVTEPSPGSVLVETDYDLGIITTFTVTPDGENRSKLTLHTRSEPKPGLMG
HCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCHHH
LIERFLSPGLLRKMYLAEFETFNQYLRSNQYRAQST
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKPIIFEITGEIEAPAELVYQIIADYRDGHPHIVPKKYFKSLTVEQGGIGKGTIFVTETE
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECH
AFGRKQTMRMHVTEPSPGSVLVETDYDLGIITTFTVTPDGENRSKLTLHTRSEPKPGLMG
HCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCHHH
LIERFLSPGLLRKMYLAEFETFNQYLRSNQYRAQST
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA