| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897445
Identifier: 159897445
GI number: 159897445
Start: 1048025
End: 1048555
Strand: Direct
Name: 159897445
Synonym: Haur_0916
Alternate gene names: NA
Gene position: 1048025-1048555 (Clockwise)
Preceding gene: 159897444
Following gene: 159897446
Centisome position: 16.51
GC content: 53.11
Gene sequence:
>531_bases ATGGATGGATTTTTGCTCGCGAATGCTTCAACCTCAAACGCCGCACTCTTCGAACAACTAGCCGATTTGGGTGTATCCCT TCAGCACAAAGCCACCGCGCAACGCCCCGCCAGCTGGTTATGGATTTGCACCAACCAGGTTGAGGAAGCCGATCGCTTAA TCTCGTTCGTCGCGTCCACTCCATTGCTGGTGGTAGTGCTTCAGCCATTGGTGCATACGCTGCGGCTTGGGCCATTGTTT GGCGCTGATGATTATTGCTGTGTTGATTGTTTTCAACGGTATAACGCTCTTTTTCCCACTCCCGCAACCAGCGATTATCT GATGGCGCTGCCAGCTTGGCAAACTGCTGCCCGTTGGCTCACCAATCAATTGCAACAGCTCGCCGCCCGCATTCTGGTGA TTCGGGCTGATGGAACCAGTCAATTAGGCCGTTTGCCGCGTGACCCATTATGTTTGCGCTGCTCGTCCTTCCGCAACTAC CCAATCGATTCCCTACAGCAACTTCATCAACCATCGGCTAACGGAGTGTAA
Upstream 100 bases:
>100_bases CCTAAGCACTGTACCAAATATGGTGGAAGTATGACTACACAGCACAGGCTCCGGCTACCGCAAGGGTCTGGAGCCTTGAC TGATTAAATGGAGTATGACG
Downstream 100 bases:
>100_bases TCATGTCAAAGACGTTCTTATCAATTGATGACATTTTGACGCGGGTTGCGCCGTTGGTGAATCCGCGCACCGGAATCTTG GGCACTGCGACCGAACTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDGFLLANASTSNAALFEQLADLGVSLQHKATAQRPASWLWICTNQVEEADRLISFVASTPLLVVVLQPLVHTLRLGPLF GADDYCCVDCFQRYNALFPTPATSDYLMALPAWQTAARWLTNQLQQLAARILVIRADGTSQLGRLPRDPLCLRCSSFRNY PIDSLQQLHQPSANGV
Sequences:
>Translated_176_residues MDGFLLANASTSNAALFEQLADLGVSLQHKATAQRPASWLWICTNQVEEADRLISFVASTPLLVVVLQPLVHTLRLGPLF GADDYCCVDCFQRYNALFPTPATSDYLMALPAWQTAARWLTNQLQQLAARILVIRADGTSQLGRLPRDPLCLRCSSFRNY PIDSLQQLHQPSANGV >Mature_176_residues MDGFLLANASTSNAALFEQLADLGVSLQHKATAQRPASWLWICTNQVEEADRLISFVASTPLLVVVLQPLVHTLRLGPLF GADDYCCVDCFQRYNALFPTPATSDYLMALPAWQTAARWLTNQLQQLAARILVIRADGTSQLGRLPRDPLCLRCSSFRNY PIDSLQQLHQPSANGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19458; Mature: 19458
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGFLLANASTSNAALFEQLADLGVSLQHKATAQRPASWLWICTNQVEEADRLISFVAST CCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCC PLLVVVLQPLVHTLRLGPLFGADDYCCVDCFQRYNALFPTPATSDYLMALPAWQTAARWL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHH TNQLQQLAARILVIRADGTSQLGRLPRDPLCLRCSSFRNYPIDSLQQLHQPSANGV HHHHHHHHHHEEEEECCCCHHHHCCCCCCHHEEHHCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MDGFLLANASTSNAALFEQLADLGVSLQHKATAQRPASWLWICTNQVEEADRLISFVAST CCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCC PLLVVVLQPLVHTLRLGPLFGADDYCCVDCFQRYNALFPTPATSDYLMALPAWQTAARWL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHH TNQLQQLAARILVIRADGTSQLGRLPRDPLCLRCSSFRNYPIDSLQQLHQPSANGV HHHHHHHHHHEEEEECCCCHHHHCCCCCCHHEEHHCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA