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The map label for this gene is udk [H]

Identifier: 159897352

GI number: 159897352

Start: 931891

End: 932550

Strand: Reverse

Name: udk [H]

Synonym: Haur_0823

Alternate gene names: 159897352

Gene position: 932550-931891 (Counterclockwise)

Preceding gene: 159897353

Following gene: 159897351

Centisome position: 14.69

GC content: 49.09

Gene sequence:

>660_bases
GTGAGCGCAGAGCAACGACCAATTGTGATTGGGGTCGCTGGCGGAACTGGATCAGGCAAAACTACCGTTTCCCAAGCGAT
TCTTAGTCGCGTCGGGCCATCACGAATTGCATTTTTACAGCACGATTCCTATTATCGTGATTTTGCTGAGCTTTCGTTTG
AAGAACGCTTGCGAGTCAATTTCGATCACCCTAACTCGCTCGATAGCAATTTGCTGGCGCAACATATCGAGGCTTTGTGC
AATGGCACAACGATTGAAGTGCCAATTTATGATTTTACGCACTATAGCCGTCGGCCTGAGGTGATGCATGTACAGCCGCG
TCCGGTTATTTTGGTCGAAGGCATTTTGATTTTCGCCGAAGCTGTGTTGCGCCAATGTATGGATGTAAAAATCTATGTTG
ATGCTGATGCCGATTTGCGCTTTATTCGTCGCCTCAAACGTGATATTGCCGAACGGGGCCGCTCAATCGAATCGGTGATC
GAGCAATATACCAACACCGTGCGCCCGATGCACCTTGAATTTGTCGAGCCAACCAAGCGCTATGCCGATATTATTATTCC
ACGCGGCGGCTTGAATGCGATTGCCATCGATATGGTGATCGCCCGCGTCGAGTATTTGCTGGCTGAAAGCGAGAAGGTAA
GTATGAAGGCTGAGGAATGA

Upstream 100 bases:

>100_bases
AACATACAAAACCAGCATAATCAGGTACAATAGGCGCAGATGGGGGCAAAGAACTAGTTGTTCTTTGCTCCCCTTTTGCG
AACAATGGAGGACAAACGGC

Downstream 100 bases:

>100_bases
AGGATGAAACAGAGGATTGAGTTTTAACACAGAGAAGCAAAGGATGAATGGCTATTGTTGCTGGGCTAGCGGACAATATT
TGGAATGACAATGACTTCAA

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSAEQRPIVIGVAGGTGSGKTTVSQAILSRVGPSRIAFLQHDSYYRDFAELSFEERLRVNFDHPNSLDSNLLAQHIEALC
NGTTIEVPIYDFTHYSRRPEVMHVQPRPVILVEGILIFAEAVLRQCMDVKIYVDADADLRFIRRLKRDIAERGRSIESVI
EQYTNTVRPMHLEFVEPTKRYADIIIPRGGLNAIAIDMVIARVEYLLAESEKVSMKAEE

Sequences:

>Translated_219_residues
MSAEQRPIVIGVAGGTGSGKTTVSQAILSRVGPSRIAFLQHDSYYRDFAELSFEERLRVNFDHPNSLDSNLLAQHIEALC
NGTTIEVPIYDFTHYSRRPEVMHVQPRPVILVEGILIFAEAVLRQCMDVKIYVDADADLRFIRRLKRDIAERGRSIESVI
EQYTNTVRPMHLEFVEPTKRYADIIIPRGGLNAIAIDMVIARVEYLLAESEKVSMKAEE
>Mature_218_residues
SAEQRPIVIGVAGGTGSGKTTVSQAILSRVGPSRIAFLQHDSYYRDFAELSFEERLRVNFDHPNSLDSNLLAQHIEALCN
GTTIEVPIYDFTHYSRRPEVMHVQPRPVILVEGILIFAEAVLRQCMDVKIYVDADADLRFIRRLKRDIAERGRSIESVIE
QYTNTVRPMHLEFVEPTKRYADIIIPRGGLNAIAIDMVIARVEYLLAESEKVSMKAEE

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI57863312, Length=206, Percent_Identity=41.747572815534, Blast_Score=181, Evalue=4e-46,
Organism=Homo sapiens, GI301129207, Length=204, Percent_Identity=42.156862745098, Blast_Score=181, Evalue=5e-46,
Organism=Homo sapiens, GI18699734, Length=210, Percent_Identity=39.5238095238095, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI13899253, Length=215, Percent_Identity=39.5348837209302, Blast_Score=171, Evalue=5e-43,
Organism=Homo sapiens, GI209863022, Length=184, Percent_Identity=34.7826086956522, Blast_Score=115, Evalue=4e-26,
Organism=Escherichia coli, GI87082034, Length=200, Percent_Identity=44.5, Blast_Score=203, Evalue=9e-54,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=40.5797101449275, Blast_Score=174, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=40.5797101449275, Blast_Score=174, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI71981181, Length=211, Percent_Identity=36.9668246445498, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6324339, Length=206, Percent_Identity=33.495145631068, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28573516, Length=203, Percent_Identity=39.4088669950739, Blast_Score=167, Evalue=7e-42,
Organism=Drosophila melanogaster, GI28573514, Length=203, Percent_Identity=39.4088669950739, Blast_Score=167, Evalue=7e-42,
Organism=Drosophila melanogaster, GI28573512, Length=203, Percent_Identity=39.4088669950739, Blast_Score=167, Evalue=7e-42,
Organism=Drosophila melanogaster, GI45550449, Length=203, Percent_Identity=39.4088669950739, Blast_Score=166, Evalue=9e-42,
Organism=Drosophila melanogaster, GI24649624, Length=216, Percent_Identity=38.4259259259259, Blast_Score=166, Evalue=1e-41,
Organism=Drosophila melanogaster, GI221458995, Length=213, Percent_Identity=38.4976525821596, Blast_Score=164, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24817; Mature: 24686

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEQRPIVIGVAGGTGSGKTTVSQAILSRVGPSRIAFLQHDSYYRDFAELSFEERLRVN
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHEEEEECCHHHHHHHHCCHHHHEEEC
FDHPNSLDSNLLAQHIEALCNGTTIEVPIYDFTHYSRRPEVMHVQPRPVILVEGILIFAE
CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHH
AVLRQCMDVKIYVDADADLRFIRRLKRDIAERGRSIESVIEQYTNTVRPMHLEFVEPTKR
HHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHH
YADIIIPRGGLNAIAIDMVIARVEYLLAESEKVSMKAEE
HHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SAEQRPIVIGVAGGTGSGKTTVSQAILSRVGPSRIAFLQHDSYYRDFAELSFEERLRVN
CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHEEEEECCHHHHHHHHCCHHHHEEEC
FDHPNSLDSNLLAQHIEALCNGTTIEVPIYDFTHYSRRPEVMHVQPRPVILVEGILIFAE
CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHH
AVLRQCMDVKIYVDADADLRFIRRLKRDIAERGRSIESVIEQYTNTVRPMHLEFVEPTKR
HHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHH
YADIIIPRGGLNAIAIDMVIARVEYLLAESEKVSMKAEE
HHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA