| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897314
Identifier: 159897314
GI number: 159897314
Start: 885055
End: 886548
Strand: Reverse
Name: 159897314
Synonym: Haur_0785
Alternate gene names: NA
Gene position: 886548-885055 (Counterclockwise)
Preceding gene: 159897315
Following gene: 159897313
Centisome position: 13.97
GC content: 49.26
Gene sequence:
>1494_bases ATGGCAGTTGGTAGCTTATGGCTGGTTGCCCCAGAGGATTTTTGGTGGCAGCTCAAAATTGGCGATCTGATTCGCACAAG TGGCAGAATCCCCACTGTTGGCGTTTTTTCCGCCACCCAAGCCAATACAGCTTTTTTCTACCAAAACTGGCTCAGCCAAT TCCTCTTTTCGTGGATCTATCAGCTTGGTGGTTTAGTTGCAATTTTACAAATCCGCAGCCTTTTATTAATCGGCAGTTAT GCTTTATTGCTCTGGCATACCTGGCGACGGGTAAAAGCCAATGGGCGGGCCGCCATGCTCGGTTTGTTGTTGAGTGTGCT GGTAAGTTTCAATCATTGGCAAGTTCAGCCTGCGATGTTTGTATGGCCGTTGTTTATCGCTAGTTTTGTGATTGTTAGCG AAGTTGCTGCCGAGCGCTGGACAACGAAATATCTCTGGTTGCTCCCGATCATCCAATTACTTTGGGTCAACCTGCATGAA AGTTTCATCTTTGGGCCAATCCTGGTTGCAACAGCCGCTGTAGGCGCAATCATCGATCGACGGCGCGACCATGATGAAGC ACCAATTTATGCAACTGCCCGAGCGCTGCAAATCGCCACGGCAACGACGACCATCGCGAGTTTTATCAACCCGCATGGCT GGAATGGCTGGATCGCCGCATGGCAACAATTAACCAGCATAGTTCCCGAAGCTTTACAAACTCAATCAGGCTCACCACTG CTGAATTTTGCTACTCCGATGGCTCAAGTGAGCTTGGCGGTTGGTTTAATTGCAGCCATGATGTTATCGGTAGTTTGGCA GCGCATGCGCAGCGCCGATCTGATCATAACGGCAATCATGGCAGCCTTTAGTTTACTCAGCATGCGTTATCAATTTTGGT TTGGTAGTGTGGCAGGCCCAATTATTGCCGAGGCAATTGTGCGCCGTGGCCGCTTACGCCTGATTAAACGTAACCCCAGC GCACCGATATGGATTGCCGGATTAACAATCACGATTGGTTTGATTGGGCTGCTTATGCAACCAATTATTCGTATTTGGCT GCCTTTACCAGCGGCTTTGCAGGGTGCAACTGGCAATTTGCCGCAAGCAACATTAGCGAGTGCTGCTACCCCAATTCAAG CAGTCGAGTTTTTACAGGCCAATCCACCAAGCCAAGCCTACTTCCATGATCTTGGCTATGGCAGCTATTTAATCTGGCAA GCTGGTGAGCAATTGCCTGTATTTATCGATCCGCGAGTTAGCTTATACCCAACCGAACATTGGCAAGCCTATAGTTGTAT TATGGCAGGCCGCGATTGGGAACGGCTGCTAACTCAAGATTCAATTGATACAATATTAGTGGATCGCGGAAACGGCCAAC AATTGATCAGCGCAGTCCAAGCCAATTCAGCTTGGCGCGAGGTTTATGCCGATCAACAAAGCCTGATTTTCAAGCGTGAT CCGCAAGCAGCCCAACCAACTGGCTCAGCCACGAGCTGTCCAGCAACTAAGTAG
Upstream 100 bases:
>100_bases AAATCGGGCTAGCATTCAAGATCAAGGAAAGGAGCAGCATATCCAACGCATCAAATGGTCTGCACCAATCTGGTGGGCTT TGCTCTTTTTTGCACTAGCA
Downstream 100 bases:
>100_bases CATAAGGATGTTTCATGCAGTCACCAGATCAGCAGCCACGTTCGCTCAATCGTGCCAATTTAAGCCCTGAAGAACGCAAA CTCCGACGTTCGATTGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MAVGSLWLVAPEDFWWQLKIGDLIRTSGRIPTVGVFSATQANTAFFYQNWLSQFLFSWIYQLGGLVAILQIRSLLLIGSY ALLLWHTWRRVKANGRAAMLGLLLSVLVSFNHWQVQPAMFVWPLFIASFVIVSEVAAERWTTKYLWLLPIIQLLWVNLHE SFIFGPILVATAAVGAIIDRRRDHDEAPIYATARALQIATATTTIASFINPHGWNGWIAAWQQLTSIVPEALQTQSGSPL LNFATPMAQVSLAVGLIAAMMLSVVWQRMRSADLIITAIMAAFSLLSMRYQFWFGSVAGPIIAEAIVRRGRLRLIKRNPS APIWIAGLTITIGLIGLLMQPIIRIWLPLPAALQGATGNLPQATLASAATPIQAVEFLQANPPSQAYFHDLGYGSYLIWQ AGEQLPVFIDPRVSLYPTEHWQAYSCIMAGRDWERLLTQDSIDTILVDRGNGQQLISAVQANSAWREVYADQQSLIFKRD PQAAQPTGSATSCPATK
Sequences:
>Translated_497_residues MAVGSLWLVAPEDFWWQLKIGDLIRTSGRIPTVGVFSATQANTAFFYQNWLSQFLFSWIYQLGGLVAILQIRSLLLIGSY ALLLWHTWRRVKANGRAAMLGLLLSVLVSFNHWQVQPAMFVWPLFIASFVIVSEVAAERWTTKYLWLLPIIQLLWVNLHE SFIFGPILVATAAVGAIIDRRRDHDEAPIYATARALQIATATTTIASFINPHGWNGWIAAWQQLTSIVPEALQTQSGSPL LNFATPMAQVSLAVGLIAAMMLSVVWQRMRSADLIITAIMAAFSLLSMRYQFWFGSVAGPIIAEAIVRRGRLRLIKRNPS APIWIAGLTITIGLIGLLMQPIIRIWLPLPAALQGATGNLPQATLASAATPIQAVEFLQANPPSQAYFHDLGYGSYLIWQ AGEQLPVFIDPRVSLYPTEHWQAYSCIMAGRDWERLLTQDSIDTILVDRGNGQQLISAVQANSAWREVYADQQSLIFKRD PQAAQPTGSATSCPATK >Mature_496_residues AVGSLWLVAPEDFWWQLKIGDLIRTSGRIPTVGVFSATQANTAFFYQNWLSQFLFSWIYQLGGLVAILQIRSLLLIGSYA LLLWHTWRRVKANGRAAMLGLLLSVLVSFNHWQVQPAMFVWPLFIASFVIVSEVAAERWTTKYLWLLPIIQLLWVNLHES FIFGPILVATAAVGAIIDRRRDHDEAPIYATARALQIATATTTIASFINPHGWNGWIAAWQQLTSIVPEALQTQSGSPLL NFATPMAQVSLAVGLIAAMMLSVVWQRMRSADLIITAIMAAFSLLSMRYQFWFGSVAGPIIAEAIVRRGRLRLIKRNPSA PIWIAGLTITIGLIGLLMQPIIRIWLPLPAALQGATGNLPQATLASAATPIQAVEFLQANPPSQAYFHDLGYGSYLIWQA GEQLPVFIDPRVSLYPTEHWQAYSCIMAGRDWERLLTQDSIDTILVDRGNGQQLISAVQANSAWREVYADQQSLIFKRDP QAAQPTGSATSCPATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55150; Mature: 55019
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGSLWLVAPEDFWWQLKIGDLIRTSGRIPTVGVFSATQANTAFFYQNWLSQFLFSWIY CCCCCEEEECCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH QLGGLVAILQIRSLLLIGSYALLLWHTWRRVKANGRAAMLGLLLSVLVSFNHWQVQPAMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECHHHH VWPLFIASFVIVSEVAAERWTTKYLWLLPIIQLLWVNLHESFIFGPILVATAAVGAIIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDHDEAPIYATARALQIATATTTIASFINPHGWNGWIAAWQQLTSIVPEALQTQSGSPL CCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC LNFATPMAQVSLAVGLIAAMMLSVVWQRMRSADLIITAIMAAFSLLSMRYQFWFGSVAGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAEAIVRRGRLRLIKRNPSAPIWIAGLTITIGLIGLLMQPIIRIWLPLPAALQGATGNL HHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC PQATLASAATPIQAVEFLQANPPSQAYFHDLGYGSYLIWQAGEQLPVFIDPRVSLYPTEH CHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCEEECCCCC WQAYSCIMAGRDWERLLTQDSIDTILVDRGNGQQLISAVQANSAWREVYADQQSLIFKRD CHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHEEECC PQAAQPTGSATSCPATK CCCCCCCCCCCCCCCCC >Mature Secondary Structure AVGSLWLVAPEDFWWQLKIGDLIRTSGRIPTVGVFSATQANTAFFYQNWLSQFLFSWIY CCCCEEEECCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH QLGGLVAILQIRSLLLIGSYALLLWHTWRRVKANGRAAMLGLLLSVLVSFNHWQVQPAMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECHHHH VWPLFIASFVIVSEVAAERWTTKYLWLLPIIQLLWVNLHESFIFGPILVATAAVGAIIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDHDEAPIYATARALQIATATTTIASFINPHGWNGWIAAWQQLTSIVPEALQTQSGSPL CCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC LNFATPMAQVSLAVGLIAAMMLSVVWQRMRSADLIITAIMAAFSLLSMRYQFWFGSVAGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAEAIVRRGRLRLIKRNPSAPIWIAGLTITIGLIGLLMQPIIRIWLPLPAALQGATGNL HHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC PQATLASAATPIQAVEFLQANPPSQAYFHDLGYGSYLIWQAGEQLPVFIDPRVSLYPTEH CHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCEEECCCCC WQAYSCIMAGRDWERLLTQDSIDTILVDRGNGQQLISAVQANSAWREVYADQQSLIFKRD CHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHEEECC PQAAQPTGSATSCPATK CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA