| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fabG [H]
Identifier: 159897276
GI number: 159897276
Start: 852151
End: 852894
Strand: Direct
Name: fabG [H]
Synonym: Haur_0747
Alternate gene names: 159897276
Gene position: 852151-852894 (Clockwise)
Preceding gene: 159897275
Following gene: 159897277
Centisome position: 13.43
GC content: 53.63
Gene sequence:
>744_bases ATGAGTATTAACGATCAAGTGGCGATTGTCACAGGTGGCACTGGTGCGGTTGGGCGCGAAGTGGTTTCGGGGTTGATTCA ACGCGGCGCACGGGTGGTTTTTTGCTATCGTCAGCGCGATGATTTGGCTGAAGAGATGTGCGATACGATTGCTGATGAGC AACGTTTGATCGCCATTAAGGCCGATGTGCGCGATGCTGAAGCCATGAATAGCCTGGTTGAAGTGGCTGTGCGGCGCTGG GAACGGCTCGATATGCTGATCACTGCCCATTCTGCGGTTAACAATGCTCCGGTGGCCGACATGACCCTTGAGCAATGGAA CGATGTAATGGATGTGATGCTGCGCGGCGTGACACGGATTACCCGCGCAGTTTTGCGGCCAATGCAAAAAGCCCGTTATG GGCGAATTATCACAATTACTGGCTATCAGCCCTTAGCTGGTGGCCTAACCCAAGCCAACTATGCTGCCGCACTTGGTGGG ATTATCGGCTTTTCTAAATCGTTGGCGCGTGAGGTTGCACCATGGGGCATTACGGTGAATAGCGTTGCCCCTGGGCTGAT CTCACGGCCCCATATGTCGAGTTTTGATCCAAGTTATATCCCATGGGCCACCAATATTGTGCCGTTGAAACGCTTAGGCG CACCTGCCGAAATTACCCCAGCAATTTTTATGCTGGCCAATCCAGAGGCGGGCTATATTACGGGCCAAGTGCTGCCAGTC GATGGCGGTTGGCGCATGGTTTAG
Upstream 100 bases:
>100_bases TGCGCCAGCGGTGGCCTTTCTGGCATCGCCTGCTGCATCGTATATTATTGGCCATGTGCTGACGATTGACGGCGGCTGGG TCATGCCATAGGGGTGCAGA
Downstream 100 bases:
>100_bases TCTTGAAGGAGCAATCATGCAACTAGATTTAACTGGTCGTGTCGCAATTGTGACTGGAGCTTCACGCGGGATCGGTCGGG CAATCGCCGAGGCTTTGGCT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSINDQVAIVTGGTGAVGREVVSGLIQRGARVVFCYRQRDDLAEEMCDTIADEQRLIAIKADVRDAEAMNSLVEVAVRRW ERLDMLITAHSAVNNAPVADMTLEQWNDVMDVMLRGVTRITRAVLRPMQKARYGRIITITGYQPLAGGLTQANYAAALGG IIGFSKSLAREVAPWGITVNSVAPGLISRPHMSSFDPSYIPWATNIVPLKRLGAPAEITPAIFMLANPEAGYITGQVLPV DGGWRMV
Sequences:
>Translated_247_residues MSINDQVAIVTGGTGAVGREVVSGLIQRGARVVFCYRQRDDLAEEMCDTIADEQRLIAIKADVRDAEAMNSLVEVAVRRW ERLDMLITAHSAVNNAPVADMTLEQWNDVMDVMLRGVTRITRAVLRPMQKARYGRIITITGYQPLAGGLTQANYAAALGG IIGFSKSLAREVAPWGITVNSVAPGLISRPHMSSFDPSYIPWATNIVPLKRLGAPAEITPAIFMLANPEAGYITGQVLPV DGGWRMV >Mature_246_residues SINDQVAIVTGGTGAVGREVVSGLIQRGARVVFCYRQRDDLAEEMCDTIADEQRLIAIKADVRDAEAMNSLVEVAVRRWE RLDMLITAHSAVNNAPVADMTLEQWNDVMDVMLRGVTRITRAVLRPMQKARYGRIITITGYQPLAGGLTQANYAAALGGI IGFSKSLAREVAPWGITVNSVAPGLISRPHMSSFDPSYIPWATNIVPLKRLGAPAEITPAIFMLANPEAGYITGQVLPVD GGWRMV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=30.6772908366534, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=28.7937743190661, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=28.2786885245902, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=27.7551020408163, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=27.9352226720648, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4758504, Length=261, Percent_Identity=28.735632183908, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI4504505, Length=200, Percent_Identity=29.5, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=26.7206477732794, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI59889578, Length=241, Percent_Identity=29.8755186721992, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI83715985, Length=261, Percent_Identity=27.5862068965517, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=25.3968253968254, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI7705925, Length=240, Percent_Identity=27.0833333333333, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI66933014, Length=173, Percent_Identity=27.1676300578035, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI31542939, Length=220, Percent_Identity=28.1818181818182, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI4503301, Length=222, Percent_Identity=26.1261261261261, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI157739938, Length=197, Percent_Identity=24.3654822335025, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4503817, Length=182, Percent_Identity=24.1758241758242, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=37.6518218623482, Blast_Score=154, Evalue=4e-39, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=29.2181069958848, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=29.0836653386454, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=25.5060728744939, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=30.952380952381, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=28.7937743190661, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=24.7933884297521, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=27.8688524590164, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=23.4817813765182, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=24.0963855421687, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=26, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1787820, Length=192, Percent_Identity=28.125, Blast_Score=72, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=31.2, Blast_Score=117, Evalue=4e-27, Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=29.2181069958848, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=27.4436090225564, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=28.6852589641434, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=26.8292682926829, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=26.5060240963855, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17568967, Length=250, Percent_Identity=26.8, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=25.6704980842912, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=26.2962962962963, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=26.2962962962963, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=24.3542435424354, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=25, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=23.2558139534884, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=26.3565891472868, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=23.7903225806452, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=23.4848484848485, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=23.8805970149254, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560220, Length=270, Percent_Identity=26.2962962962963, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=23.3463035019455, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=26.1224489795918, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=24.3445692883895, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=22.2641509433962, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=22.4806201550388, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=25.7028112449799, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=21.8867924528302, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17531453, Length=273, Percent_Identity=26.7399267399267, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=20.703125, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=259, Percent_Identity=28.957528957529, Blast_Score=105, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=28.6290322580645, Blast_Score=101, Evalue=9e-23, Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=29.5275590551181, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=29.2181069958848, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=26.1224489795918, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=30, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI17737361, Length=263, Percent_Identity=25.0950570342205, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=24.8031496062992, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26819; Mature: 26688
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINDQVAIVTGGTGAVGREVVSGLIQRGARVVFCYRQRDDLAEEMCDTIADEQRLIAIK CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEE ADVRDAEAMNSLVEVAVRRWERLDMLITAHSAVNNAPVADMTLEQWNDVMDVMLRGVTRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TRAVLRPMQKARYGRIITITGYQPLAGGLTQANYAAALGGIIGFSKSLAREVAPWGITVN HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH SVAPGLISRPHMSSFDPSYIPWATNIVPLKRLGAPAEITPAIFMLANPEAGYITGQVLPV CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEC DGGWRMV CCCEECC >Mature Secondary Structure SINDQVAIVTGGTGAVGREVVSGLIQRGARVVFCYRQRDDLAEEMCDTIADEQRLIAIK CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEE ADVRDAEAMNSLVEVAVRRWERLDMLITAHSAVNNAPVADMTLEQWNDVMDVMLRGVTRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TRAVLRPMQKARYGRIITITGYQPLAGGLTQANYAAALGGIIGFSKSLAREVAPWGITVN HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH SVAPGLISRPHMSSFDPSYIPWATNIVPLKRLGAPAEITPAIFMLANPEAGYITGQVLPV CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEC DGGWRMV CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]