Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is fabH [H]
Identifier: 159897273
GI number: 159897273
Start: 848934
End: 849920
Strand: Direct
Name: fabH [H]
Synonym: Haur_0744
Alternate gene names: 159897273
Gene position: 848934-849920 (Clockwise)
Preceding gene: 159897272
Following gene: 159897274
Centisome position: 13.38
GC content: 52.28
Gene sequence:
>987_bases ATGAATGCAGCTATTACTGGTTGGGGGCGCTACGCTCCCGATCGTGTGCTTACAAACCAAGAACTTGAACAAATTGTCGA TACCAATGATGAATGGATTCAATCGCGGACTGGCATTCAGCGCCGCCATATTGTTGCTGAAGGTCAAGCCACCTCGGATA TGTCGGCTCGTGCCGCGCGGATTGCCCTCGATAAGGCGGGAGTAAAACCCGAAGAGCTTGATTTAATTGTCGTAGCGACT ACTTCGCCCGATTTGCTGTTGCCCTCAACTGCCGCCTTAGTTCAAACCAAACTCGGCGCGATCAACGCTGGCGTGATGGA TATGAATGCTGCTTGCTGTGGCTTTTTATATGCGCTAAGCGCCGTTACAGCCATGATTCGTGGCGGTGGTGTGGGTAAAG TACTACTCTGCGGAGCAGAAACCATCTCGCCATTTTTAAATTGGCAAGATCGCAACACCTGCGTGATTTTTGGCGATGCT GCTGGTGCTGTCATTCTTGAAGCGACCGAGCAAGAGCGTGGTTTGCAATCCTACAAACTTGGGGCGATCCCCGATACCGC CGAATTATTGTGGATCAAAGCTGGCGCGACGCTCTACCCTGCAACTCACGAGCGACTTGATCAGTCTGAACAGTATATTC AGATGAATGGCTCGGAAGTGTTTAAGCATGCGGTGCGCTCGATGGTCGATAGTTCGTTACATGTGTTGAACCAAGTTGGT AAAACGCCCGCCGATGTGCAACTGGTTGTTCCGCATCAAGCCAATTTACGCATTATCGAAGCCGTCGCCAAACGCCTGAA TGTGTCGATGGATCAGGTTTTTGTCAATATTCAAGAATATGGCAATACCTCAGCCGCCACTTTGCCCGTAGCGATCGCTG AAGCCGCCGATGCTGGCCGCATGCAGCCTGGCGATACGATCTTGCTGACCGCGTTTGGTGGCGGCCTGACCTGGGCTTCG GGTGTGTTGGTGTGGGGCGGGAAGTAG
Upstream 100 bases:
>100_bases AGCGAAAGGGTCGAGACCTATGGTTCTCGTCCCTTTCGCATTTTAGGCGCGTTATTGTGCAGTGCAGCATGAAACGGCTT CACCACGGGAGTGTTTTGCA
Downstream 100 bases:
>100_bases AACATAGATGTAATGGTTTATAGTTTAACAACGGCCAGCATGCCCTCACCCCCTCTCCCGCACGCGAGGCGAGGGGGAAC CGCTCTCGGAGTGCTCCCCT
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNAAITGWGRYAPDRVLTNQELEQIVDTNDEWIQSRTGIQRRHIVAEGQATSDMSARAARIALDKAGVKPEELDLIVVAT TSPDLLLPSTAALVQTKLGAINAGVMDMNAACCGFLYALSAVTAMIRGGGVGKVLLCGAETISPFLNWQDRNTCVIFGDA AGAVILEATEQERGLQSYKLGAIPDTAELLWIKAGATLYPATHERLDQSEQYIQMNGSEVFKHAVRSMVDSSLHVLNQVG KTPADVQLVVPHQANLRIIEAVAKRLNVSMDQVFVNIQEYGNTSAATLPVAIAEAADAGRMQPGDTILLTAFGGGLTWAS GVLVWGGK
Sequences:
>Translated_328_residues MNAAITGWGRYAPDRVLTNQELEQIVDTNDEWIQSRTGIQRRHIVAEGQATSDMSARAARIALDKAGVKPEELDLIVVAT TSPDLLLPSTAALVQTKLGAINAGVMDMNAACCGFLYALSAVTAMIRGGGVGKVLLCGAETISPFLNWQDRNTCVIFGDA AGAVILEATEQERGLQSYKLGAIPDTAELLWIKAGATLYPATHERLDQSEQYIQMNGSEVFKHAVRSMVDSSLHVLNQVG KTPADVQLVVPHQANLRIIEAVAKRLNVSMDQVFVNIQEYGNTSAATLPVAIAEAADAGRMQPGDTILLTAFGGGLTWAS GVLVWGGK >Mature_328_residues MNAAITGWGRYAPDRVLTNQELEQIVDTNDEWIQSRTGIQRRHIVAEGQATSDMSARAARIALDKAGVKPEELDLIVVAT TSPDLLLPSTAALVQTKLGAINAGVMDMNAACCGFLYALSAVTAMIRGGGVGKVLLCGAETISPFLNWQDRNTCVIFGDA AGAVILEATEQERGLQSYKLGAIPDTAELLWIKAGATLYPATHERLDQSEQYIQMNGSEVFKHAVRSMVDSSLHVLNQVG KTPADVQLVVPHQANLRIIEAVAKRLNVSMDQVFVNIQEYGNTSAATLPVAIAEAADAGRMQPGDTILLTAFGGGLTWAS GVLVWGGK
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=326, Percent_Identity=42.638036809816, Blast_Score=240, Evalue=7e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 34970; Mature: 34970
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAITGWGRYAPDRVLTNQELEQIVDTNDEWIQSRTGIQRRHIVAEGQATSDMSARAAR CCCCCCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHHCCCCHHEEEECCCCCCCHHHHHHH IALDKAGVKPEELDLIVVATTSPDLLLPSTAALVQTKLGAINAGVMDMNAACCGFLYALS HHHHHCCCCCCCEEEEEEEECCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AVTAMIRGGGVGKVLLCGAETISPFLNWQDRNTCVIFGDAAGAVILEATEQERGLQSYKL HHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCEEEEEECCCCEEEEEECHHHCCHHHEEC GAIPDTAELLWIKAGATLYPATHERLDQSEQYIQMNGSEVFKHAVRSMVDSSLHVLNQVG CCCCCCCEEEEEECCCEECCCHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHC KTPADVQLVVPHQANLRIIEAVAKRLNVSMDQVFVNIQEYGNTSAATLPVAIAEAADAGR CCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHEEEHHHCCCCCCCEEEEEEEHHCCCCC MQPGDTILLTAFGGGLTWASGVLVWGGK CCCCCEEEEEECCCCCHHHCCEEEECCC >Mature Secondary Structure MNAAITGWGRYAPDRVLTNQELEQIVDTNDEWIQSRTGIQRRHIVAEGQATSDMSARAAR CCCCCCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHHCCCCHHEEEECCCCCCCHHHHHHH IALDKAGVKPEELDLIVVATTSPDLLLPSTAALVQTKLGAINAGVMDMNAACCGFLYALS HHHHHCCCCCCCEEEEEEEECCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AVTAMIRGGGVGKVLLCGAETISPFLNWQDRNTCVIFGDAAGAVILEATEQERGLQSYKL HHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCEEEEEECCCCEEEEEECHHHCCHHHEEC GAIPDTAELLWIKAGATLYPATHERLDQSEQYIQMNGSEVFKHAVRSMVDSSLHVLNQVG CCCCCCCEEEEEECCCEECCCHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHC KTPADVQLVVPHQANLRIIEAVAKRLNVSMDQVFVNIQEYGNTSAATLPVAIAEAADAGR CCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHEEEHHHCCCCCCCEEEEEEEHHCCCCC MQPGDTILLTAFGGGLTWASGVLVWGGK CCCCCEEEEEECCCCCHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA