Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is resE [H]
Identifier: 159897248
GI number: 159897248
Start: 827601
End: 829196
Strand: Direct
Name: resE [H]
Synonym: Haur_0719
Alternate gene names: 159897248
Gene position: 827601-829196 (Clockwise)
Preceding gene: 159897247
Following gene: 159897249
Centisome position: 13.04
GC content: 50.56
Gene sequence:
>1596_bases ATGCAAGCAACACCCGAACTAATTTTGATTGTGGATGATCAAACCACCAATGTGATGGTGTTACAGCGGATGTTAGAACG CGCTGGTTATGCTACTGCCTGTGCTCGCAGCGGCTTCGAAGCCTTGACCATGCTCGAACAACAAGTTCCCGATTTGATTT TGCTTGACGTAATGATGCCGGAGATGGATGGCTATCAAACGCTTCAGGCGATTCGTGAACGTAATCATCTGCCATTTATT CCAATTATCTTTGTTTCGGCCAAGCAAACCACCGCCGATACGGTAACTGGTTTGGATTTGGGCGCTGATGATTACGTTAC CAAGCCCGTCAATCGTGATGAATTGCTGGCTCGTATGCGGGTGCTGTTGCGTTTGAAGCATACGCGACGGGCGCTCCATC GTGAACAAGAACGTTTGCGCTTTCTCTATCGGGTTTCGCAAACCTTGCATCGCTCGTTGGATATTGATCAAGTGCTGCCC GAAGCCTTGAATGCGATCAACGAGCTGTTGGGAGCCAGCCGTGGTAGCGTCTTGCTACTTGATGATCAAAATCGGGTTTG GCGGCGAATTCTGTTTCGACCGCATTTGCCGCCTGCCGAGGCTGAACAAGCGATTCAGGCGGTGTTGCGTGAAGGTTTGG CCTCGTATGCCTTGCGCACTGGCGAAGTCCAAATCGTCGAAGATGCCCAAAACGATCCCCGCTGGAAGCATTTTTATGAT GATCGCGAGGAAATTGGCTCGGCGCTGGCCTTGCCATTGCATAATTATGCCCAAAATACGATTATCGGCGTATTTATCTT GGTGCATCCCCAACGCAACTTCTTCCGCACCGAGCTAGAAACCCTGATCAAAGCCTTGACTGATCAATTAAGCGTGGCCT TGACCAATGCGGCGGTTTACACTCGTTTGCGCGAAGCTGAAGATAGCCGCGATAGTTTTATTCAGATGCTGACCCATGAC TTACGCGCACCTTTGGCGGGCATGGTTGGCTGCTTCGATGCCTTGATGACCACCCAACTTGACGATGATGGCAAATTGTT TGTCGAGCTTGGCTTTCGAGCCGGAGCTGCCCAACAACGCCTGATCGACGATTTGCTTGATGTTTACAAGGCTGAGGCAG GCCGCTTGATGCTTAGCAAGGAAACCACCAGCTTGCAACGTTTGGGTGAATTGCTGAGCGAGCAAGTATTGGGAATTACG GTTGAACAACAACTGAGCTTTGAGCTTGATCTGCCAGCCGAGCCATTGGTGGTGCTTGATGAGCATAAAATGGTGCGCGT ATTGGCCAATCTGGTCAGCAACGGCATCAAATGGACAAGGCCAGGTGGTACAATTCGCGTGGTTGGAACGATTGATCAAG CGCAGCAACTGATTACCCTAAACGTCAGCGATACGGGGCAGGGGATTGCTGCCGAAGATATTCCACATATTTTCGATAAA TTTTATCAAGGTCGTACTACCGCCCAATCGCGGGGCACTGGTTTAGGCTTGACCTTTTGTAATTTAGCAGTTGGTGCTCA TGGCGGCACAATTAGCGTGGATAGCCAAGTAGGCAAGGGGACGACGGTCACCGTGCAACTACCTTGGAAGGAGTAA
Upstream 100 bases:
>100_bases GCAGGTCAGCCAAACCCTAGAACAAAGCTACGAACGCTGGATGGAACTTTCTGAGCTAGCGTCGGCTTCGTAATTTTCAG CGCATGGATGGAGCACAGGA
Downstream 100 bases:
>100_bases ACTCTAATGCCAGCACGATGGCGTATTCTTGTAGTTGATGATGACACGATTATTCGCCGCACGCTCGTGAGCAATTTGCT TAACGATGGGTTTGAAGTAA
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MQATPELILIVDDQTTNVMVLQRMLERAGYATACARSGFEALTMLEQQVPDLILLDVMMPEMDGYQTLQAIRERNHLPFI PIIFVSAKQTTADTVTGLDLGADDYVTKPVNRDELLARMRVLLRLKHTRRALHREQERLRFLYRVSQTLHRSLDIDQVLP EALNAINELLGASRGSVLLLDDQNRVWRRILFRPHLPPAEAEQAIQAVLREGLASYALRTGEVQIVEDAQNDPRWKHFYD DREEIGSALALPLHNYAQNTIIGVFILVHPQRNFFRTELETLIKALTDQLSVALTNAAVYTRLREAEDSRDSFIQMLTHD LRAPLAGMVGCFDALMTTQLDDDGKLFVELGFRAGAAQQRLIDDLLDVYKAEAGRLMLSKETTSLQRLGELLSEQVLGIT VEQQLSFELDLPAEPLVVLDEHKMVRVLANLVSNGIKWTRPGGTIRVVGTIDQAQQLITLNVSDTGQGIAAEDIPHIFDK FYQGRTTAQSRGTGLGLTFCNLAVGAHGGTISVDSQVGKGTTVTVQLPWKE
Sequences:
>Translated_531_residues MQATPELILIVDDQTTNVMVLQRMLERAGYATACARSGFEALTMLEQQVPDLILLDVMMPEMDGYQTLQAIRERNHLPFI PIIFVSAKQTTADTVTGLDLGADDYVTKPVNRDELLARMRVLLRLKHTRRALHREQERLRFLYRVSQTLHRSLDIDQVLP EALNAINELLGASRGSVLLLDDQNRVWRRILFRPHLPPAEAEQAIQAVLREGLASYALRTGEVQIVEDAQNDPRWKHFYD DREEIGSALALPLHNYAQNTIIGVFILVHPQRNFFRTELETLIKALTDQLSVALTNAAVYTRLREAEDSRDSFIQMLTHD LRAPLAGMVGCFDALMTTQLDDDGKLFVELGFRAGAAQQRLIDDLLDVYKAEAGRLMLSKETTSLQRLGELLSEQVLGIT VEQQLSFELDLPAEPLVVLDEHKMVRVLANLVSNGIKWTRPGGTIRVVGTIDQAQQLITLNVSDTGQGIAAEDIPHIFDK FYQGRTTAQSRGTGLGLTFCNLAVGAHGGTISVDSQVGKGTTVTVQLPWKE >Mature_531_residues MQATPELILIVDDQTTNVMVLQRMLERAGYATACARSGFEALTMLEQQVPDLILLDVMMPEMDGYQTLQAIRERNHLPFI PIIFVSAKQTTADTVTGLDLGADDYVTKPVNRDELLARMRVLLRLKHTRRALHREQERLRFLYRVSQTLHRSLDIDQVLP EALNAINELLGASRGSVLLLDDQNRVWRRILFRPHLPPAEAEQAIQAVLREGLASYALRTGEVQIVEDAQNDPRWKHFYD DREEIGSALALPLHNYAQNTIIGVFILVHPQRNFFRTELETLIKALTDQLSVALTNAAVYTRLREAEDSRDSFIQMLTHD LRAPLAGMVGCFDALMTTQLDDDGKLFVELGFRAGAAQQRLIDDLLDVYKAEAGRLMLSKETTSLQRLGELLSEQVLGIT VEQQLSFELDLPAEPLVVLDEHKMVRVLANLVSNGIKWTRPGGTIRVVGTIDQAQQLITLNVSDTGQGIAAEDIPHIFDK FYQGRTTAQSRGTGLGLTFCNLAVGAHGGTISVDSQVGKGTTVTVQLPWKE
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=228, Percent_Identity=31.140350877193, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1788713, Length=257, Percent_Identity=26.8482490272374, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI48994928, Length=233, Percent_Identity=28.755364806867, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1789149, Length=229, Percent_Identity=29.6943231441048, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1790437, Length=121, Percent_Identity=40.495867768595, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786912, Length=237, Percent_Identity=31.2236286919831, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87082012, Length=122, Percent_Identity=40.1639344262295, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788394, Length=134, Percent_Identity=38.8059701492537, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788393, Length=228, Percent_Identity=25.8771929824561, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1790860, Length=119, Percent_Identity=34.453781512605, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1787229, Length=139, Percent_Identity=35.9712230215827, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=35.042735042735, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=37.6068376068376, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI2367329, Length=120, Percent_Identity=43.3333333333333, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=29.7777777777778, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=26.2931034482759, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=36.7521367521368, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788550, Length=130, Percent_Identity=36.9230769230769, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790552, Length=117, Percent_Identity=37.6068376068376, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=35.1351351351351, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87081816, Length=270, Percent_Identity=26.2962962962963, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787375, Length=117, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786911, Length=121, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790863, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786783, Length=238, Percent_Identity=26.0504201680672, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=35.9223300970874, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1788905, Length=115, Percent_Identity=33.9130434782609, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790861, Length=223, Percent_Identity=24.6636771300448, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 59333; Mature: 59333
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATPELILIVDDQTTNVMVLQRMLERAGYATACARSGFEALTMLEQQVPDLILLDVMMP CCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCEEEHHHHCC EMDGYQTLQAIRERNHLPFIPIIFVSAKQTTADTVTGLDLGADDYVTKPVNRDELLARMR CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHH VLLRLKHTRRALHREQERLRFLYRVSQTLHRSLDIDQVLPEALNAINELLGASRGSVLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE DDQNRVWRRILFRPHLPPAEAEQAIQAVLREGLASYALRTGEVQIVEDAQNDPRWKHFYD ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC DREEIGSALALPLHNYAQNTIIGVFILVHPQRNFFRTELETLIKALTDQLSVALTNAAVY CHHHHCHHHHHHHHHHHHHCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRLREAEDSRDSFIQMLTHDLRAPLAGMVGCFDALMTTQLDDDGKLFVELGFRAGAAQQR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH LIDDLLDVYKAEAGRLMLSKETTSLQRLGELLSEQVLGITVEQQLSFELDLPAEPLVVLD HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCEEEECCEEEEECCCCCCEEEEC EHKMVRVLANLVSNGIKWTRPGGTIRVVGTIDQAQQLITLNVSDTGQGIAAEDIPHIFDK CHHHHHHHHHHHHCCCEEECCCCEEEEEEEHHCCCEEEEEEECCCCCCCCHHHHHHHHHH FYQGRTTAQSRGTGLGLTFCNLAVGAHGGTISVDSQVGKGTTVTVQLPWKE HHCCCCCHHCCCCCCEEEHHHHHEECCCCEEEECCCCCCCCEEEEEECCCC >Mature Secondary Structure MQATPELILIVDDQTTNVMVLQRMLERAGYATACARSGFEALTMLEQQVPDLILLDVMMP CCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCEEEHHHHCC EMDGYQTLQAIRERNHLPFIPIIFVSAKQTTADTVTGLDLGADDYVTKPVNRDELLARMR CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHH VLLRLKHTRRALHREQERLRFLYRVSQTLHRSLDIDQVLPEALNAINELLGASRGSVLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE DDQNRVWRRILFRPHLPPAEAEQAIQAVLREGLASYALRTGEVQIVEDAQNDPRWKHFYD ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC DREEIGSALALPLHNYAQNTIIGVFILVHPQRNFFRTELETLIKALTDQLSVALTNAAVY CHHHHCHHHHHHHHHHHHHCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRLREAEDSRDSFIQMLTHDLRAPLAGMVGCFDALMTTQLDDDGKLFVELGFRAGAAQQR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH LIDDLLDVYKAEAGRLMLSKETTSLQRLGELLSEQVLGITVEQQLSFELDLPAEPLVVLD HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCEEEECCEEEEECCCCCCEEEEC EHKMVRVLANLVSNGIKWTRPGGTIRVVGTIDQAQQLITLNVSDTGQGIAAEDIPHIFDK CHHHHHHHHHHHHCCCEEECCCCEEEEEEEHHCCCEEEEEEECCCCCCCCHHHHHHHHHH FYQGRTTAQSRGTGLGLTFCNLAVGAHGGTISVDSQVGKGTTVTVQLPWKE HHCCCCCHHCCCCCCEEEHHHHHEECCCCEEEECCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]