Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897221
Identifier: 159897221
GI number: 159897221
Start: 796546
End: 797304
Strand: Direct
Name: 159897221
Synonym: Haur_0692
Alternate gene names: NA
Gene position: 796546-797304 (Clockwise)
Preceding gene: 159897220
Following gene: 159897230
Centisome position: 12.55
GC content: 51.38
Gene sequence:
>759_bases ATGACCGATAATCGTCAGCGCTTCAGCAATCGGGTAGCTGATTATGTGCAATTTCGCCCAAATTACCCTAGCGAAATATT CGTGCCCTTGCAACAACACCATGGCTTTGGCCAAAACTCAGTTGTGGCCGATGTTGGGGCAGGCACAGGGATTTGGAGCG AGCAACTACTCCAGCATGGGGCAACTGTCTATGCGATTGAACCCAACGCACCGATGCGCGAAGCCAGCTTGCAACTTACC GAGCGTTATCCTACATTTCAAGCGGTTGATAGCAGCGCCGAAACCACAGGCTTGGCCGATCAGAGCGTCAATTGGATTAC GGCGGCTCAAGCATTTCACTGGTTTGAGCCACAGGCGACGCGCAGCGAATGGCAACGAATTTTACAACCTGAGGGCTGGG TAGGCTTAATTTGGAACCAACGTTCGCTTGATGGCACAGCATTTTTGCAGCAATACGAAGCGCTATTACACCAATTTGGC AGCGATTACGCCAGCGTCAAACATACCAACATCGAACCACAACGCATCGCCGATTTCTTTGGCAACCAACCAGCATGCTA CACCGCCCAAAACGCCCAATATTTTGATCAAGCTGGTTTGTTGGGTCGGGCCTTTTCCTCGTCGTACACGCCCACGCCTG AGCAACCCACCTATCATCCGCTACGCCAAGGGCTGATTGAGGCTTGGCAACAGCATCAGGTTGAAGGCAAAGTAGCCTTT TTATATACAACAACGGTGTATGTCGGGCAGTTTAGCTAG
Upstream 100 bases:
>100_bases CGCCATTATGGCCGATGCTGGTTGGTTTGGCCTTGGTCGGATTGATTTTTGAATGGTGGTATAGCTTTCGATCGTAGTAT TTGCTTGAAGGAGTAGCCCA
Downstream 100 bases:
>100_bases ATGTAACGGTTCATACTGCCCTTACCCCCTAGCCCCTTTATTCAAGGTTATGTTTTTAACAATGATTGGGTGGGAGTACC GCCGATTGCCATGCCCTCAC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTDNRQRFSNRVADYVQFRPNYPSEIFVPLQQHHGFGQNSVVADVGAGTGIWSEQLLQHGATVYAIEPNAPMREASLQLT ERYPTFQAVDSSAETTGLADQSVNWITAAQAFHWFEPQATRSEWQRILQPEGWVGLIWNQRSLDGTAFLQQYEALLHQFG SDYASVKHTNIEPQRIADFFGNQPACYTAQNAQYFDQAGLLGRAFSSSYTPTPEQPTYHPLRQGLIEAWQQHQVEGKVAF LYTTTVYVGQFS
Sequences:
>Translated_252_residues MTDNRQRFSNRVADYVQFRPNYPSEIFVPLQQHHGFGQNSVVADVGAGTGIWSEQLLQHGATVYAIEPNAPMREASLQLT ERYPTFQAVDSSAETTGLADQSVNWITAAQAFHWFEPQATRSEWQRILQPEGWVGLIWNQRSLDGTAFLQQYEALLHQFG SDYASVKHTNIEPQRIADFFGNQPACYTAQNAQYFDQAGLLGRAFSSSYTPTPEQPTYHPLRQGLIEAWQQHQVEGKVAF LYTTTVYVGQFS >Mature_251_residues TDNRQRFSNRVADYVQFRPNYPSEIFVPLQQHHGFGQNSVVADVGAGTGIWSEQLLQHGATVYAIEPNAPMREASLQLTE RYPTFQAVDSSAETTGLADQSVNWITAAQAFHWFEPQATRSEWQRILQPEGWVGLIWNQRSLDGTAFLQQYEALLHQFGS DYASVKHTNIEPQRIADFFGNQPACYTAQNAQYFDQAGLLGRAFSSSYTPTPEQPTYHPLRQGLIEAWQQHQVEGKVAFL YTTTVYVGQFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28530; Mature: 28399
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNRQRFSNRVADYVQFRPNYPSEIFVPLQQHHGFGQNSVVADVGAGTGIWSEQLLQHG CCCCHHHHHHHHHHHHHCCCCCCHHEEEEHHHHCCCCCCCEEEECCCCCCHHHHHHHHCC ATVYAIEPNAPMREASLQLTERYPTFQAVDSSAETTGLADQSVNWITAAQAFHWFEPQAT CEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCCCCHH RSEWQRILQPEGWVGLIWNQRSLDGTAFLQQYEALLHQFGSDYASVKHTNIEPQRIADFF HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHHHHH GNQPACYTAQNAQYFDQAGLLGRAFSSSYTPTPEQPTYHPLRQGLIEAWQQHQVEGKVAF CCCCCEEEECCCHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE LYTTTVYVGQFS EEEEEEEEEECC >Mature Secondary Structure TDNRQRFSNRVADYVQFRPNYPSEIFVPLQQHHGFGQNSVVADVGAGTGIWSEQLLQHG CCCHHHHHHHHHHHHHCCCCCCHHEEEEHHHHCCCCCCCEEEECCCCCCHHHHHHHHCC ATVYAIEPNAPMREASLQLTERYPTFQAVDSSAETTGLADQSVNWITAAQAFHWFEPQAT CEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCCCCHH RSEWQRILQPEGWVGLIWNQRSLDGTAFLQQYEALLHQFGSDYASVKHTNIEPQRIADFF HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHHHHH GNQPACYTAQNAQYFDQAGLLGRAFSSSYTPTPEQPTYHPLRQGLIEAWQQHQVEGKVAF CCCCCEEEECCCHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE LYTTTVYVGQFS EEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]