Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897195
Identifier: 159897195
GI number: 159897195
Start: 763822
End: 765588
Strand: Direct
Name: 159897195
Synonym: Haur_0666
Alternate gene names: NA
Gene position: 763822-765588 (Clockwise)
Preceding gene: 159897194
Following gene: 159897209
Centisome position: 12.04
GC content: 58.97
Gene sequence:
>1767_bases ATGCTTGATCCCCAATTCCAAATTCTCATACAGGATCTGACGAGTAGCCAAATGCTGGATGTCTCCGATCGGGTGACCGC CGCCACGTGGCGCTATACCGAGCAGGGCTGTGGTGATCTCAGTGTCACCATGCCCTGCACCATGCCGGAAGCCTATTGGT TCAAAACGCTGCCGTTTGTCTATGTCAAAGTCTTCAATCGCTGCTCGAAGCGCATCTGGTGGGGCCGCGCCGCTGGCGAC GATGTGACGATTATCCGCACGGCGGATGGGGCTGTCTCAATCCAGATCTTGGCCTTGGGCCTCGTCAAAGCGCTCGAAGA TATTCCCCACACGGGCTGGTGGAGTAGCACGCGCTATGGTGATTGGCAGGACGTGCCCAGCGACCTGATTCCGAGCCGCA CGCCCGAGCGCTTCAGCTTCGAAACCGAGCGGCGCTTGCGGATTGCCCCATCGGGCGGCAATGGCTTTACCACCAGCAGT ATTGGCATGCTCTCGATTGCGCAGCCCGCTGCGGCGAGTGTCCAGTGGCAAACCATCGAGGCGAGCTACACCCTGAAAGC GCCTGCTGGATGGCGAGCCAGCCTCAGCCGCTACGATGGCACAACCTTTTTATCCTCGCTTTGGACGCTTGATGGCGTTG GCATCGGCGCGACCGGAATTACCACCCAAAGCGGCACGCTGAGCTTCCTGAGTGGCGTGGGCTGTTCGCGCTTGGGCTTC AATCTGTTTTGTACCCGTGCAGCCACGAATCTGCATACCGCAGCGATTACGGCAGGTACGCGCACGGTCACGCCTGGCAC GATGGCGGGGATCGCGGTCAATGCCAAGTTGGCGATTGGCGGCGCGGATCCGGAGGAAGTCGTCGTGACGGCCACGACTG CGACGACCTTTACTGCCGTGTTTCGCAATGCGCACCTTGGCAGCGATCTGGTCGAGCCGCTATGGGATGGGAATGATGGC GATATTGAGTTGGTGATTACTAATGTGCGGGTCAAAGCTGTCACCACAGCAACCGTCACGCTGGATCAATTGGCCAAGTA TGCCTTGAGTGAGGTATTGGCGGTCAATCCATGGGCGGTCTTTAATAGCGATGGCAAAGTGCAAAGTCCGCTCGTCGATA TCGCCAATCTGGTGGCAGAAGATCTGCCGTGGGCGACGATCTTGAGTGAGCAGGTGCAGCTGGGGGATACCAGTAACCGT CCATGGGTCTGGGGTGTTGATGAAGATGGGGTACTGTTTGTGCGGCCACGCCAGTCAGGGCGGGTATGGTATGTGAGTAC CGAGCAATGCAGCTATACCCAAGGCGGCAATAGCGATGGACGCTGGACGAGTGGCTATGGGGTGTATGAGGATGAGCAGG GCCAACGCCAGCGCACGCCCATCCAAACCGATGCCCAAGCCTTGGCCAATAGCGGATTGATTCGGCGCACGGCGCTGATG GTTGATAGTGGGACGCTCGCCGTGGCCACGCAACGAACCAGTGTATTTCTGAGTGATGCCGCCAAAGGCGAAGCCGCTGC CAGTCTGACCTGTGCGGTGCTGGAAACCGTGGATGGCATGGTCTATCCAGCGACCGAAGCGCGACCGGGTGACATGCTGC TGTTTCGTGATGTGCTGCCCACCAGTAGCGCGGTGGCCAATCGCCTGAATGGCTTTGTGTTGTCCGAAGTGCAGGTCGAT GGCTTCAATTTGGCGGCAGTGCATCTTGTGCCCGAGGAGCCACTGCCACAGCTGGAGATGGTGACCGCCAAGGTGGGTAT CCAGTAA
Upstream 100 bases:
>100_bases CCAACTGGCGGATTGTCGATGCAGCCAGCGCCGTGACCAATTATGTGCTGACCCTTGACCGCTATCGGGCCTACCGGATG CCAGAGTAAGCGAGGCAATA
Downstream 100 bases:
>100_bases ACAAACAGGCTTTACAAGCAAAAACGCCTGTGATCAGGATGCTGATCACAGGCGTTTTTTATGATTGTTATTATTATACT GCCGAGGATTGCGTTCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MLDPQFQILIQDLTSSQMLDVSDRVTAATWRYTEQGCGDLSVTMPCTMPEAYWFKTLPFVYVKVFNRCSKRIWWGRAAGD DVTIIRTADGAVSIQILALGLVKALEDIPHTGWWSSTRYGDWQDVPSDLIPSRTPERFSFETERRLRIAPSGGNGFTTSS IGMLSIAQPAAASVQWQTIEASYTLKAPAGWRASLSRYDGTTFLSSLWTLDGVGIGATGITTQSGTLSFLSGVGCSRLGF NLFCTRAATNLHTAAITAGTRTVTPGTMAGIAVNAKLAIGGADPEEVVVTATTATTFTAVFRNAHLGSDLVEPLWDGNDG DIELVITNVRVKAVTTATVTLDQLAKYALSEVLAVNPWAVFNSDGKVQSPLVDIANLVAEDLPWATILSEQVQLGDTSNR PWVWGVDEDGVLFVRPRQSGRVWYVSTEQCSYTQGGNSDGRWTSGYGVYEDEQGQRQRTPIQTDAQALANSGLIRRTALM VDSGTLAVATQRTSVFLSDAAKGEAAASLTCAVLETVDGMVYPATEARPGDMLLFRDVLPTSSAVANRLNGFVLSEVQVD GFNLAAVHLVPEEPLPQLEMVTAKVGIQ
Sequences:
>Translated_588_residues MLDPQFQILIQDLTSSQMLDVSDRVTAATWRYTEQGCGDLSVTMPCTMPEAYWFKTLPFVYVKVFNRCSKRIWWGRAAGD DVTIIRTADGAVSIQILALGLVKALEDIPHTGWWSSTRYGDWQDVPSDLIPSRTPERFSFETERRLRIAPSGGNGFTTSS IGMLSIAQPAAASVQWQTIEASYTLKAPAGWRASLSRYDGTTFLSSLWTLDGVGIGATGITTQSGTLSFLSGVGCSRLGF NLFCTRAATNLHTAAITAGTRTVTPGTMAGIAVNAKLAIGGADPEEVVVTATTATTFTAVFRNAHLGSDLVEPLWDGNDG DIELVITNVRVKAVTTATVTLDQLAKYALSEVLAVNPWAVFNSDGKVQSPLVDIANLVAEDLPWATILSEQVQLGDTSNR PWVWGVDEDGVLFVRPRQSGRVWYVSTEQCSYTQGGNSDGRWTSGYGVYEDEQGQRQRTPIQTDAQALANSGLIRRTALM VDSGTLAVATQRTSVFLSDAAKGEAAASLTCAVLETVDGMVYPATEARPGDMLLFRDVLPTSSAVANRLNGFVLSEVQVD GFNLAAVHLVPEEPLPQLEMVTAKVGIQ >Mature_588_residues MLDPQFQILIQDLTSSQMLDVSDRVTAATWRYTEQGCGDLSVTMPCTMPEAYWFKTLPFVYVKVFNRCSKRIWWGRAAGD DVTIIRTADGAVSIQILALGLVKALEDIPHTGWWSSTRYGDWQDVPSDLIPSRTPERFSFETERRLRIAPSGGNGFTTSS IGMLSIAQPAAASVQWQTIEASYTLKAPAGWRASLSRYDGTTFLSSLWTLDGVGIGATGITTQSGTLSFLSGVGCSRLGF NLFCTRAATNLHTAAITAGTRTVTPGTMAGIAVNAKLAIGGADPEEVVVTATTATTFTAVFRNAHLGSDLVEPLWDGNDG DIELVITNVRVKAVTTATVTLDQLAKYALSEVLAVNPWAVFNSDGKVQSPLVDIANLVAEDLPWATILSEQVQLGDTSNR PWVWGVDEDGVLFVRPRQSGRVWYVSTEQCSYTQGGNSDGRWTSGYGVYEDEQGQRQRTPIQTDAQALANSGLIRRTALM VDSGTLAVATQRTSVFLSDAAKGEAAASLTCAVLETVDGMVYPATEARPGDMLLFRDVLPTSSAVANRLNGFVLSEVQVD GFNLAAVHLVPEEPLPQLEMVTAKVGIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63330; Mature: 63330
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPQFQILIQDLTSSQMLDVSDRVTAATWRYTEQGCGDLSVTMPCTMPEAYWFKTLPFV CCCCHHHHHEECCCCCCEECCCCCEEEEEEEEHHCCCCCEEEEECCCCCCHHHHHHHHHH YVKVFNRCSKRIWWGRAAGDDVTIIRTADGAVSIQILALGLVKALEDIPHTGWWSSTRYG HHHHHHHHHHHEEECCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCC DWQDVPSDLIPSRTPERFSFETERRLRIAPSGGNGFTTSSIGMLSIAQPAAASVQWQTIE CHHCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCEEEECCCCCCCEEEEEEE ASYTLKAPAGWRASLSRYDGTTFLSSLWTLDGVGIGATGITTQSGTLSFLSGVGCSRLGF EEEEEECCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHCCCHHHCCC NLFCTRAATNLHTAAITAGTRTVTPGTMAGIAVNAKLAIGGADPEEVVVTATTATTFTAV EEEEEECCCCCEEEEEECCCEEECCCCEEEEEEEEEEEECCCCCCCEEEEEECHHHHHHH FRNAHLGSDLVEPLWDGNDGDIELVITNVRVKAVTTATVTLDQLAKYALSEVLAVNPWAV HHCCCCCCHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEE FNSDGKVQSPLVDIANLVAEDLPWATILSEQVQLGDTSNRPWVWGVDEDGVLFVRPRQSG ECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCC RVWYVSTEQCSYTQGGNSDGRWTSGYGVYEDEQGQRQRTPIQTDAQALANSGLIRRTALM CEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEE VDSGTLAVATQRTSVFLSDAAKGEAAASLTCAVLETVDGMVYPATEARPGDMLLFRDVLP EECCCEEEEEECEEEEEECCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCC TSSAVANRLNGFVLSEVQVDGFNLAAVHLVPEEPLPQLEMVTAKVGIQ CHHHHHHHHCCEEEEEEEECCEEEEEEEEECCCCCCCCEEEEEECCCC >Mature Secondary Structure MLDPQFQILIQDLTSSQMLDVSDRVTAATWRYTEQGCGDLSVTMPCTMPEAYWFKTLPFV CCCCHHHHHEECCCCCCEECCCCCEEEEEEEEHHCCCCCEEEEECCCCCCHHHHHHHHHH YVKVFNRCSKRIWWGRAAGDDVTIIRTADGAVSIQILALGLVKALEDIPHTGWWSSTRYG HHHHHHHHHHHEEECCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCC DWQDVPSDLIPSRTPERFSFETERRLRIAPSGGNGFTTSSIGMLSIAQPAAASVQWQTIE CHHCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCEEEECCCCCCCEEEEEEE ASYTLKAPAGWRASLSRYDGTTFLSSLWTLDGVGIGATGITTQSGTLSFLSGVGCSRLGF EEEEEECCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHCCCHHHCCC NLFCTRAATNLHTAAITAGTRTVTPGTMAGIAVNAKLAIGGADPEEVVVTATTATTFTAV EEEEEECCCCCEEEEEECCCEEECCCCEEEEEEEEEEEECCCCCCCEEEEEECHHHHHHH FRNAHLGSDLVEPLWDGNDGDIELVITNVRVKAVTTATVTLDQLAKYALSEVLAVNPWAV HHCCCCCCHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEE FNSDGKVQSPLVDIANLVAEDLPWATILSEQVQLGDTSNRPWVWGVDEDGVLFVRPRQSG ECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCC RVWYVSTEQCSYTQGGNSDGRWTSGYGVYEDEQGQRQRTPIQTDAQALANSGLIRRTALM CEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEE VDSGTLAVATQRTSVFLSDAAKGEAAASLTCAVLETVDGMVYPATEARPGDMLLFRDVLP EECCCEEEEEECEEEEEECCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCC TSSAVANRLNGFVLSEVQVDGFNLAAVHLVPEEPLPQLEMVTAKVGIQ CHHHHHHHHCCEEEEEEEECCEEEEEEEEECCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA