Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897192
Identifier: 159897192
GI number: 159897192
Start: 758448
End: 758831
Strand: Direct
Name: 159897192
Synonym: Haur_0663
Alternate gene names: NA
Gene position: 758448-758831 (Clockwise)
Preceding gene: 159897191
Following gene: 159897193
Centisome position: 11.95
GC content: 59.9
Gene sequence:
>384_bases ATGAGCCGTTTTACCCCAACCACCACCATTGACCTGACCGATGCGGAGGACACGATCACCATGCGCACGGGCTTGACCTA TGGCCAACGCGCCGATTATGCCGATGCCTTGATGCAGATTGAGGGTGAGTATGTCACGACCTATCGCCGCCAGTTGCTGA TGCTCGAAGCCACAATCGAGGATTGGTCAGGCCCATCGTTTGATGCCATGCCGCTCACCCGCACCAGCATTGCGGCGCTC GATGCGCGTGATCCGCTGGTACAACGGGCCGTGGCCCATGCGGAGGCGGTGATCTACCCAAAGGCCGCACCATTAACGGA CGACACCAGCAGTACAGCTTCAGCCACGCCGAGCAGCTCTACTGGGGTTGGTACGCCCAGCTAA
Upstream 100 bases:
>100_bases TAGCGATCTGCGCATCGCCTGCCAAAACACCAAAACCACGGTATAAGCCACGGTTTTCGCGCAACGTTGATAGATGTTCA CTTGTGAAAAGGATGCCTGT
Downstream 100 bases:
>100_bases GTGGCGCAGTGGCCACGCGGATCGGTGATTACGATGCTGAGGTGGCCTTAGCCATGCGCTTTGGCTGGACGTATGAGCAA ATTCGCCAGCAACCCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSRFTPTTTIDLTDAEDTITMRTGLTYGQRADYADALMQIEGEYVTTYRRQLLMLEATIEDWSGPSFDAMPLTRTSIAAL DARDPLVQRAVAHAEAVIYPKAAPLTDDTSSTASATPSSSTGVGTPS
Sequences:
>Translated_127_residues MSRFTPTTTIDLTDAEDTITMRTGLTYGQRADYADALMQIEGEYVTTYRRQLLMLEATIEDWSGPSFDAMPLTRTSIAAL DARDPLVQRAVAHAEAVIYPKAAPLTDDTSSTASATPSSSTGVGTPS >Mature_126_residues SRFTPTTTIDLTDAEDTITMRTGLTYGQRADYADALMQIEGEYVTTYRRQLLMLEATIEDWSGPSFDAMPLTRTSIAALD ARDPLVQRAVAHAEAVIYPKAAPLTDDTSSTASATPSSSTGVGTPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13652; Mature: 13521
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFTPTTTIDLTDAEDTITMRTGLTYGQRADYADALMQIEGEYVTTYRRQLLMLEATIE CCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEECC DWSGPSFDAMPLTRTSIAALDARDPLVQRAVAHAEAVIYPKAAPLTDDTSSTASATPSSS CCCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC TGVGTPS CCCCCCC >Mature Secondary Structure SRFTPTTTIDLTDAEDTITMRTGLTYGQRADYADALMQIEGEYVTTYRRQLLMLEATIE CCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEECC DWSGPSFDAMPLTRTSIAALDARDPLVQRAVAHAEAVIYPKAAPLTDDTSSTASATPSSS CCCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC TGVGTPS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA