Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897180
Identifier: 159897180
GI number: 159897180
Start: 749366
End: 750118
Strand: Direct
Name: 159897180
Synonym: Haur_0651
Alternate gene names: NA
Gene position: 749366-750118 (Clockwise)
Preceding gene: 159897179
Following gene: 159897181
Centisome position: 11.81
GC content: 59.23
Gene sequence:
>753_bases ATGACCTTCGTGATCGATCTGCGCTGGCGCAAACATCACCGCCCCGTTGGCACGGGCTGGGACTATCGCCCCAAAGGCAT CAAGCCCAGTTCTGCCGTGATTCACACGACCAATGGCAATCGCGGCAGCAGTTTTGAAGCTGAAGCCGACTACTTGGAAG CCAGTAGCGGGGTGGGTGCGCATTATTTGGTTGGCCAACGCGGCCAGATTGCCGAGATTCTGCCGCCGATCTATCGGGCC TGGCATGCCGGAGCCGCTAAGGACGACTGGATCAATAGTCGCTCGATTGGCATCGAATGCCATCACGCGGTTGGTGAGGC ATGGACTCACGAGCAACGCGCGGCCCTCGCATGGCTCTGCCAACGCCTGATGGCCGACTGGTCAATTGTCCTCGGCGCGA TCGAAACCCATCGCTTTGTGGCTTTGCCTGCGGGACGCAAGCCCGATCCTTCCGACTGGACGGATCGCAGCTTCTATGAC TGGCGAGCGGCCCTGATCGCTCCGGTCCAACCAGCCGGAACCTATCCGGTGGCGCTTGAACTCAAAGTGGCATGGCAAAG CAGTGGTGGTCTGTGGCATCCGTCGCAATTTGCGCCGGGCTATGCCCTGACTCCCTTCTTTCGCCATCCTGATGGCCATC AGTATCAACTCTTCGAGCGCAGCGGCGCACGCTTTACACCGCAGGGCACGATCGAATGGTTGTTTACCGAAGAAGTGGAA CGTTTGAAACAGTGGTGGCGAACCCACCCATAA
Upstream 100 bases:
>100_bases CAAGTCGCTATCTGACCGAGCTGGGCCTACGCTTTGATCCGAAGTTCCTCATTGACCTGTTACATGCCGAATATCAGAAG CATTTTGGAGCACCCACGTC
Downstream 100 bases:
>100_bases TGTCGCTTCGGCGACGATCAGCGGCGGTGCGGCTGCGCCGTGGGCGGGGCTAGAGCAGCAATGTGACTGTGTTCCCCCGC CCCACCGCAAACTTTTCAAG
Product: N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTFVIDLRWRKHHRPVGTGWDYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLEASSGVGAHYLVGQRGQIAEILPPIYRA WHAGAAKDDWINSRSIGIECHHAVGEAWTHEQRAALAWLCQRLMADWSIVLGAIETHRFVALPAGRKPDPSDWTDRSFYD WRAALIAPVQPAGTYPVALELKVAWQSSGGLWHPSQFAPGYALTPFFRHPDGHQYQLFERSGARFTPQGTIEWLFTEEVE RLKQWWRTHP
Sequences:
>Translated_250_residues MTFVIDLRWRKHHRPVGTGWDYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLEASSGVGAHYLVGQRGQIAEILPPIYRA WHAGAAKDDWINSRSIGIECHHAVGEAWTHEQRAALAWLCQRLMADWSIVLGAIETHRFVALPAGRKPDPSDWTDRSFYD WRAALIAPVQPAGTYPVALELKVAWQSSGGLWHPSQFAPGYALTPFFRHPDGHQYQLFERSGARFTPQGTIEWLFTEEVE RLKQWWRTHP >Mature_249_residues TFVIDLRWRKHHRPVGTGWDYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLEASSGVGAHYLVGQRGQIAEILPPIYRAW HAGAAKDDWINSRSIGIECHHAVGEAWTHEQRAALAWLCQRLMADWSIVLGAIETHRFVALPAGRKPDPSDWTDRSFYDW RAALIAPVQPAGTYPVALELKVAWQSSGGLWHPSQFAPGYALTPFFRHPDGHQYQLFERSGARFTPQGTIEWLFTEEVER LKQWWRTHP
Specific function: Unknown
COG id: COG3023
COG function: function code V; Negative regulator of beta-lactamase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28388; Mature: 28257
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVIDLRWRKHHRPVGTGWDYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLEASSGVGA CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCE HYLVGQRGQIAEILPPIYRAWHAGAAKDDWINSRSIGIECHHAVGEAWTHEQRAALAWLC EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QRLMADWSIVLGAIETHRFVALPAGRKPDPSDWTDRSFYDWRAALIAPVQPAGTYPVALE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCEEEE LKVAWQSSGGLWHPSQFAPGYALTPFFRHPDGHQYQLFERSGARFTPQGTIEWLFTEEVE EEEEEECCCCCCCCCCCCCCCEECCCEECCCCCEEEEEECCCCEECCCCCEEEEEHHHHH RLKQWWRTHP HHHHHHCCCC >Mature Secondary Structure TFVIDLRWRKHHRPVGTGWDYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLEASSGVGA EEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCE HYLVGQRGQIAEILPPIYRAWHAGAAKDDWINSRSIGIECHHAVGEAWTHEQRAALAWLC EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QRLMADWSIVLGAIETHRFVALPAGRKPDPSDWTDRSFYDWRAALIAPVQPAGTYPVALE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCEEEE LKVAWQSSGGLWHPSQFAPGYALTPFFRHPDGHQYQLFERSGARFTPQGTIEWLFTEEVE EEEEEECCCCCCCCCCCCCCCEECCCEECCCCCEEEEEECCCCEECCCCCEEEEEHHHHH RLKQWWRTHP HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA