Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is luxQ [H]
Identifier: 159897135
GI number: 159897135
Start: 696810
End: 699167
Strand: Direct
Name: luxQ [H]
Synonym: Haur_0606
Alternate gene names: 159897135
Gene position: 696810-699167 (Clockwise)
Preceding gene: 159897134
Following gene: 159897137
Centisome position: 10.98
GC content: 47.29
Gene sequence:
>2358_bases ATGCACTGGCAAATTCCATCGTATACCTTTCCCACCTTGATTGCGAGCAGCGTTTCGTTTGCAATCGCAATTATTGTCTC ACGTCGCCGCTTTGTTTCACAGATGTGGCCGTTTGCTATTTTAGCTTTCACTGTTGCTTTTTGGACATTGGGCTATGCAT GGGAATTGGTCAGTGTTGATTTAGCGACTAAAGTTATTTTTGCTAAAACTCAATATTTAGGCATTGCTACGCCACCAGTC GCTTGGGTGGCGTATGCTTTATATTACACCGGACAAGAGCGTTTTGTCACTAAGCGTAGTTTTTTATATGCCATGATTAT TCCTGCAATTACCATTGTTTTAGTCTGGACGAATGAATGGCATCATTTGATTTGGACAAAAACTGAAATTGCGATGTATG GCGAATATACGATGCTCCAAACTTATTATGGACCATGGTTTTGGGTGCATACGGCTTATTCATATGTGTTTATGGCGGCT GGTACGTTAATTTTGCTGCAAGCATTAGTACTTTCTTCATCGCTTTATCAAAATCAAATTATTGCCTTAATTTTAAGTGC AATCGCGCCATGGGTCACCAATGCGTTTCATATTTTAGGCTATCGGCCATTTCCCTATCTTGATTTAACCCCGTTTGGCT TTGTGATTAGCACCGTTGCCTTGGCGTGGGGGGCTTTGCGCTATCGTTTGTTCGATACGATTCCAATTGCGCGGCATATT TTGATGGAAAATCTCAGTGAGGGCGTGATTTTTCTCGATGCTAAGCGCCGCGTGATGGATATGAACGCCACGGCTGGCAA GTTGTTGGATATTCGGCCCGACCAGCAAATTGGTCAATCGGCCATCGTCAGCATTTTAGAACGTTTGGATGCACCGCAAT CGGATGATTCTGATGAGCATTTGCGTTGGGAATATACGCTCCATCGCGATGAGAAAAAATTAGTGCTCGATGTGCAATTA TCGCCACTGAGCGATCGCAATCGCTATCTTGGCCATTTGCTGTTGCTACGCGATATTACTGAGCGCCATCAGTACGAAGA TTTGCTGCGCTCGCAACGTAATTTGTTTGCCGGCTTGGTTGAAGTGGCCCGCGCCACCAGCGCTCAGATTGATCTCGACC AGACCTTGCAAAGCACCTTGGATGTGGCGCTCCACCTAACCACAGCCGAGCAAGGCAGTATTTTTCTGCTCGACCAACAT CAAATGGTGACTCATAGCATTTTGGCCCGCGAAAAAGCCACGCGCATCGAACAGCAAAATTTGGTTGGGCGGGTGATGCG CCAAGGCTTGGCAGGCTGGATCGTCGCCCACAATCAAATTGCCTTGATCAAAGACACCCACACTGATGATCGTTGGTTGC ATTTGCCAAACGCACCCTACAATGCGCGTTCGGTGTTGGCCTTGCCGATTTTTGGCACGGCTGGAATTTTGGGTATTTTG ATGCTGTTGCATTCAGAGGTTGATCATTTTCGCCAGGAGCATTCCGAGTTGATGGAAGCGGCTACCGCTCAAATTTCGTT TGCAATTGGCAACGCCCATGTGTACCAAACCCAGCAACAACTGACTCGCGAGCTAAGCCGCGCCAAGGATGCTGCCGAGG CTGCTAGCCAAACCAAAAGCCAATTTTTGGCCAATATGAGCCACGAATTACGCACCCCGCTTACCGCGATTATTGGCTAT GCCGATGTGATGCGCGAAGATTTACTCGATTCCAACGACCAAATTTATTTAGCCGACTTGGATCGGATTCGCTCAGCCGG AGCGCATTTGTTGGGCTTAATCAACGATGTGCTTGATCTCTCGAAAATTGAGGCAGGCAAAATGCCAGTCTATTGGGAGC AAACCCGCGTCAGCATTCTATTAAATGATGTGATTACGACGGTGCGCCCACAGATTGACCGCAACCATAATAGCCTGATG ATCGACCAGACCTACCATAACCTGATGTTTTGGACCGATATTTCTAAGTTGCGGCGGGTGTTGATTAATTTGTTGGGCAA TGCGGCCAAATTCACTGACCATGGCACGATTTCGCTCTCGCTTTTTCTTGATGAAACCGATGAGCCTGCTTGTTTGCAAA TACGGGTTTGCGATACAGGCATTGGGATGACGGCTGAGCAAGTTGCCAATTTGTTTCAAAATTTTAGCCAAGCCGATGCC TCAACAACGCGTAAATATGGCGGCACTGGGCTTGGCTTGGCGATTAGTCGTAATCTGTGCAAATTAATGGGCGGCGATAT TGAAGTGACCAGCGAGTTAGGCCATGGCTCAACTTTTATTGTCAAGTTGCCATGGGTCGAGCAACCATTTAGCGATCAGC GTGAAGTTGGTTCCGACGGACCACCCTACCTGTTTTGA
Upstream 100 bases:
>100_bases TTAGTTTGCAGCCACGCCATGGGGTCGAAATGAAACATCTCGGCACACGCACGACCTATATTCTTAATCGCCATCGGCAT CATTAAGCTTAGGAATTGTT
Downstream 100 bases:
>100_bases TCACGATGGCGACTGGATTTGTGCCAAACTTATAGCCGATATGGCGTTCGTCGGGCAGGTTGAGCAAGGCCAGATCAGCT TGCATGCCAACTGCTAAGCT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 785; Mature: 785
Protein sequence:
>785_residues MHWQIPSYTFPTLIASSVSFAIAIIVSRRRFVSQMWPFAILAFTVAFWTLGYAWELVSVDLATKVIFAKTQYLGIATPPV AWVAYALYYTGQERFVTKRSFLYAMIIPAITIVLVWTNEWHHLIWTKTEIAMYGEYTMLQTYYGPWFWVHTAYSYVFMAA GTLILLQALVLSSSLYQNQIIALILSAIAPWVTNAFHILGYRPFPYLDLTPFGFVISTVALAWGALRYRLFDTIPIARHI LMENLSEGVIFLDAKRRVMDMNATAGKLLDIRPDQQIGQSAIVSILERLDAPQSDDSDEHLRWEYTLHRDEKKLVLDVQL SPLSDRNRYLGHLLLLRDITERHQYEDLLRSQRNLFAGLVEVARATSAQIDLDQTLQSTLDVALHLTTAEQGSIFLLDQH QMVTHSILAREKATRIEQQNLVGRVMRQGLAGWIVAHNQIALIKDTHTDDRWLHLPNAPYNARSVLALPIFGTAGILGIL MLLHSEVDHFRQEHSELMEAATAQISFAIGNAHVYQTQQQLTRELSRAKDAAEAASQTKSQFLANMSHELRTPLTAIIGY ADVMREDLLDSNDQIYLADLDRIRSAGAHLLGLINDVLDLSKIEAGKMPVYWEQTRVSILLNDVITTVRPQIDRNHNSLM IDQTYHNLMFWTDISKLRRVLINLLGNAAKFTDHGTISLSLFLDETDEPACLQIRVCDTGIGMTAEQVANLFQNFSQADA STTRKYGGTGLGLAISRNLCKLMGGDIEVTSELGHGSTFIVKLPWVEQPFSDQREVGSDGPPYLF
Sequences:
>Translated_785_residues MHWQIPSYTFPTLIASSVSFAIAIIVSRRRFVSQMWPFAILAFTVAFWTLGYAWELVSVDLATKVIFAKTQYLGIATPPV AWVAYALYYTGQERFVTKRSFLYAMIIPAITIVLVWTNEWHHLIWTKTEIAMYGEYTMLQTYYGPWFWVHTAYSYVFMAA GTLILLQALVLSSSLYQNQIIALILSAIAPWVTNAFHILGYRPFPYLDLTPFGFVISTVALAWGALRYRLFDTIPIARHI LMENLSEGVIFLDAKRRVMDMNATAGKLLDIRPDQQIGQSAIVSILERLDAPQSDDSDEHLRWEYTLHRDEKKLVLDVQL SPLSDRNRYLGHLLLLRDITERHQYEDLLRSQRNLFAGLVEVARATSAQIDLDQTLQSTLDVALHLTTAEQGSIFLLDQH QMVTHSILAREKATRIEQQNLVGRVMRQGLAGWIVAHNQIALIKDTHTDDRWLHLPNAPYNARSVLALPIFGTAGILGIL MLLHSEVDHFRQEHSELMEAATAQISFAIGNAHVYQTQQQLTRELSRAKDAAEAASQTKSQFLANMSHELRTPLTAIIGY ADVMREDLLDSNDQIYLADLDRIRSAGAHLLGLINDVLDLSKIEAGKMPVYWEQTRVSILLNDVITTVRPQIDRNHNSLM IDQTYHNLMFWTDISKLRRVLINLLGNAAKFTDHGTISLSLFLDETDEPACLQIRVCDTGIGMTAEQVANLFQNFSQADA STTRKYGGTGLGLAISRNLCKLMGGDIEVTSELGHGSTFIVKLPWVEQPFSDQREVGSDGPPYLF >Mature_785_residues MHWQIPSYTFPTLIASSVSFAIAIIVSRRRFVSQMWPFAILAFTVAFWTLGYAWELVSVDLATKVIFAKTQYLGIATPPV AWVAYALYYTGQERFVTKRSFLYAMIIPAITIVLVWTNEWHHLIWTKTEIAMYGEYTMLQTYYGPWFWVHTAYSYVFMAA GTLILLQALVLSSSLYQNQIIALILSAIAPWVTNAFHILGYRPFPYLDLTPFGFVISTVALAWGALRYRLFDTIPIARHI LMENLSEGVIFLDAKRRVMDMNATAGKLLDIRPDQQIGQSAIVSILERLDAPQSDDSDEHLRWEYTLHRDEKKLVLDVQL SPLSDRNRYLGHLLLLRDITERHQYEDLLRSQRNLFAGLVEVARATSAQIDLDQTLQSTLDVALHLTTAEQGSIFLLDQH QMVTHSILAREKATRIEQQNLVGRVMRQGLAGWIVAHNQIALIKDTHTDDRWLHLPNAPYNARSVLALPIFGTAGILGIL MLLHSEVDHFRQEHSELMEAATAQISFAIGNAHVYQTQQQLTRELSRAKDAAEAASQTKSQFLANMSHELRTPLTAIIGY ADVMREDLLDSNDQIYLADLDRIRSAGAHLLGLINDVLDLSKIEAGKMPVYWEQTRVSILLNDVITTVRPQIDRNHNSLM IDQTYHNLMFWTDISKLRRVLINLLGNAAKFTDHGTISLSLFLDETDEPACLQIRVCDTGIGMTAEQVANLFQNFSQADA STTRKYGGTGLGLAISRNLCKLMGGDIEVTSELGHGSTFIVKLPWVEQPFSDQREVGSDGPPYLF
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=244, Percent_Identity=39.7540983606557, Blast_Score=149, Evalue=9e-37, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=38.0566801619433, Blast_Score=146, Evalue=5e-36, Organism=Escherichia coli, GI48994928, Length=255, Percent_Identity=34.1176470588235, Blast_Score=133, Evalue=5e-32, Organism=Escherichia coli, GI1788713, Length=249, Percent_Identity=32.5301204819277, Blast_Score=127, Evalue=4e-30, Organism=Escherichia coli, GI87081816, Length=253, Percent_Identity=37.9446640316205, Blast_Score=126, Evalue=5e-30, Organism=Escherichia coli, GI1786600, Length=227, Percent_Identity=29.5154185022026, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786912, Length=346, Percent_Identity=26.3005780346821, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=29.1304347826087, Blast_Score=78, Evalue=3e-15, Organism=Escherichia coli, GI1788393, Length=257, Percent_Identity=24.9027237354086, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=27.5303643724696, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787894, Length=253, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1790346, Length=234, Percent_Identity=25.6410256410256, Blast_Score=73, Evalue=9e-14, Organism=Escherichia coli, GI1790861, Length=229, Percent_Identity=25.764192139738, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI87082128, Length=229, Percent_Identity=25.764192139738, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88728; Mature: 88728
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN ; PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHWQIPSYTFPTLIASSVSFAIAIIVSRRRFVSQMWPFAILAFTVAFWTLGYAWELVSVD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATKVIFAKTQYLGIATPPVAWVAYALYYTGQERFVTKRSFLYAMIIPAITIVLVWTNEW HHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC HHLIWTKTEIAMYGEYTMLQTYYGPWFWVHTAYSYVFMAAGTLILLQALVLSSSLYQNQI CEEEEEEEEEEEECCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALILSAIAPWVTNAFHILGYRPFPYLDLTPFGFVISTVALAWGALRYRLFDTIPIARHI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMENLSEGVIFLDAKRRVMDMNATAGKLLDIRPDQQIGQSAIVSILERLDAPQSDDSDEH HHHHHCCCEEEEECCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC LRWEYTLHRDEKKLVLDVQLSPLSDRNRYLGHLLLLRDITERHQYEDLLRSQRNLFAGLV EEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVARATSAQIDLDQTLQSTLDVALHLTTAEQGSIFLLDQHQMVTHSILAREKATRIEQQN HHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH LVGRVMRQGLAGWIVAHNQIALIKDTHTDDRWLHLPNAPYNARSVLALPIFGTAGILGIL HHHHHHHHCCCEEEEECCEEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHH MLLHSEVDHFRQEHSELMEAATAQISFAIGNAHVYQTQQQLTRELSRAKDAAEAASQTKS HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLANMSHELRTPLTAIIGYADVMREDLLDSNDQIYLADLDRIRSAGAHLLGLINDVLDL HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH SKIEAGKMPVYWEQTRVSILLNDVITTVRPQIDRNHNSLMIDQTYHNLMFWTDISKLRRV HHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHEEEEHHHHHHHHH LINLLGNAAKFTDHGTISLSLFLDETDEPACLQIRVCDTGIGMTAEQVANLFQNFSQADA HHHHHCCCCEECCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCH STTRKYGGTGLGLAISRNLCKLMGGDIEVTSELGHGSTFIVKLPWVEQPFSDQREVGSDG HHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHCCCCC PPYLF CCCCC >Mature Secondary Structure MHWQIPSYTFPTLIASSVSFAIAIIVSRRRFVSQMWPFAILAFTVAFWTLGYAWELVSVD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATKVIFAKTQYLGIATPPVAWVAYALYYTGQERFVTKRSFLYAMIIPAITIVLVWTNEW HHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC HHLIWTKTEIAMYGEYTMLQTYYGPWFWVHTAYSYVFMAAGTLILLQALVLSSSLYQNQI CEEEEEEEEEEEECCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALILSAIAPWVTNAFHILGYRPFPYLDLTPFGFVISTVALAWGALRYRLFDTIPIARHI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMENLSEGVIFLDAKRRVMDMNATAGKLLDIRPDQQIGQSAIVSILERLDAPQSDDSDEH HHHHHCCCEEEEECCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC LRWEYTLHRDEKKLVLDVQLSPLSDRNRYLGHLLLLRDITERHQYEDLLRSQRNLFAGLV EEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVARATSAQIDLDQTLQSTLDVALHLTTAEQGSIFLLDQHQMVTHSILAREKATRIEQQN HHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH LVGRVMRQGLAGWIVAHNQIALIKDTHTDDRWLHLPNAPYNARSVLALPIFGTAGILGIL HHHHHHHHCCCEEEEECCEEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHH MLLHSEVDHFRQEHSELMEAATAQISFAIGNAHVYQTQQQLTRELSRAKDAAEAASQTKS HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLANMSHELRTPLTAIIGYADVMREDLLDSNDQIYLADLDRIRSAGAHLLGLINDVLDL HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH SKIEAGKMPVYWEQTRVSILLNDVITTVRPQIDRNHNSLMIDQTYHNLMFWTDISKLRRV HHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHEEEEHHHHHHHHH LINLLGNAAKFTDHGTISLSLFLDETDEPACLQIRVCDTGIGMTAEQVANLFQNFSQADA HHHHHCCCCEECCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCH STTRKYGGTGLGLAISRNLCKLMGGDIEVTSELGHGSTFIVKLPWVEQPFSDQREVGSDG HHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHCCCCC PPYLF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA