Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897119
Identifier: 159897119
GI number: 159897119
Start: 679819
End: 681375
Strand: Direct
Name: 159897119
Synonym: Haur_0590
Alternate gene names: NA
Gene position: 679819-681375 (Clockwise)
Preceding gene: 159897118
Following gene: 159897124
Centisome position: 10.71
GC content: 52.02
Gene sequence:
>1557_bases ATGCGTCGTTGGCTTTATATTGGTTTGGCTGTGCTTTTGATTGGCTGTGGCCAAGCCTTGAAAGCGACCAGCAGCGAGGT TGCTCCAAGCACTAAGCCTGCCGCCGCGCCAACGATTGATTTAACTGCCCTGATCACATGGCAGCCAGTGCCAGCCTATA CCCCACAAATTCCCACGCCAACTAATATTCCAATTCCCACGCCAATTCCCGATGCTTGGCCAAATGAGCAGGCTTTGGCG CTGCGCCCCGAATTTGCGGGCGATGCTACTCATTCAACCATGCCACGATATGCAATGCAGATTACGCTTGAGCCAAATGT AGGTCGTTATAGCGGCAGCCAAATTATTACCTACACCAATACGACTGGCGCTAGTATCAATAGTTTGGTGCTGCGTTCGT ATAATAATTTTCCGCCCGATGCCCAAGGCGATGGCGGCGATACCACGCTTGAAGTTACTAAGGCTTGGAGCAATGGCAAC GAATTGAATCTTGCTCGTGAAGCCGAAAATACCGCTTTTCGGCTTAATCTCGCCACAAGCCTAGCACCCAATCAGCAGGT TGTAATCAGCACCCAATTTGCTGGCACAATCAAGGCTTGGCCCGATGGCTCGTATCCCTTGCTTTCGGCCTATCCGATGC TAGCGGTTTGGGATGCAGCAGCCAACGATTGGCGCATGGATGTAACGCGCTTTCCTGATCGGGTGTTTGCTGAAACTGCA CTCTATCGGGTGCAACTCAAGCTACCTGCCGAATATCAAGTCATTGGAGCGGGAACGCTGCTGGAGCAAAATGCTGATCG CACCAGCCGCACCTATGTTAGTGGGCCAGTGCGGGAGTGGGCCGCCGCGCTTGGTCAATTTTCGGTCAGTACAAGCAGCA TTGATGGAATTGACGTTAATGCCTATGGCCCCGATTATCTTGATTTGGCGCGGGTGCGCGAGATGGCAATTGGCGCTTTG ACTAGTTATCAAGCCAAAATCGGCGCGTATCCCTACCGCAAACTCGATCTGCATGTGATGCCATGGGATAGCGGCGGCGG CATCGAGTATCCAGCTTACACGATTATTTTGGTGAACGATGGGATCAATCGTGATGCTGATTATGTGGTGTTCCATGAAG TAGCCCATCAGTGGTGGTATGGGTTGTTGGGCAACGATGTCTATCGTGAGGCTTGGCTGGATGAGGCCATGGCTAGCTAC TTGACCTATGTGGCAACTCAGGACGTGCTTGGTCAAGCTGCCGCCGATAGCTATTACAGCGGCGAAATCGAGCGTTTGGC GCTCAGTAATCAAGCCAATGGCAATTGGCCAGCAGGCTTGGCGATCAATCAATATCCATCATTTAATAGCTACTATCGCG CAGTCTATGGCAAAGGCGCGGCGATGTTGCATCAGTTACGCATCAAGCTTGGCGATCAAAGCTTCTTCCAAGGTTTAGCC CAACTCAACGACCAAAAGCGCTATCAGATTATCACCCGTAGCGATTTCCAAAGCGTTATGGAGCAAAGCAGCGGCCAAGC CCTAGGCGAGTGGCTGGATGGCTGGCTCAACTGGTGA
Upstream 100 bases:
>100_bases CGGTTGGATCTCCCCTCGCCCGCCGCAGTGGGAGAGGGGTTGGGGGTGAGGGCATGCTGGCGGACTTTTAAAACCTACCC CTGTAAAGAGGAGTAAACTC
Downstream 100 bases:
>100_bases GATTGACTCGCCCTGTGAGCGTTCGCTGGTTTGCTCCAATAAATCGACTTGCATGCCTTCGCGGGCTACAAAGGCCAATG GATAGACCGCTTGAGCATCG
Product: peptidase M1 membrane alanine aminopeptidase
Products: NA
Alternate protein names: Metallopeptidase; Aminopeptidase N; Aminopeptidase; Peptidase; Peptidase M; Peptidase M1 Membrane Alanine Aminopeptidase-Like Protein; Aminopeptidase N PepN; Epsilon-Poly-L-Lysine-Degrading; Peptidase M1 Family Protein; M1 Family Peptidase; Zn-Dependent Aminopeptidase; Lysyl Aminopeptidase/Alanine Aminopeptidase; Glutamyl Aminopeptidase; Aminopeptidase M1 Family; M1 Family Aminopeptidase; Secreted Aminopeptidase; Membrane Alanine Aminopeptidase PepN; Peptidase M1 Superfamily Peptidase
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MRRWLYIGLAVLLIGCGQALKATSSEVAPSTKPAAAPTIDLTALITWQPVPAYTPQIPTPTNIPIPTPIPDAWPNEQALA LRPEFAGDATHSTMPRYAMQITLEPNVGRYSGSQIITYTNTTGASINSLVLRSYNNFPPDAQGDGGDTTLEVTKAWSNGN ELNLAREAENTAFRLNLATSLAPNQQVVISTQFAGTIKAWPDGSYPLLSAYPMLAVWDAAANDWRMDVTRFPDRVFAETA LYRVQLKLPAEYQVIGAGTLLEQNADRTSRTYVSGPVREWAAALGQFSVSTSSIDGIDVNAYGPDYLDLARVREMAIGAL TSYQAKIGAYPYRKLDLHVMPWDSGGGIEYPAYTIILVNDGINRDADYVVFHEVAHQWWYGLLGNDVYREAWLDEAMASY LTYVATQDVLGQAAADSYYSGEIERLALSNQANGNWPAGLAINQYPSFNSYYRAVYGKGAAMLHQLRIKLGDQSFFQGLA QLNDQKRYQIITRSDFQSVMEQSSGQALGEWLDGWLNW
Sequences:
>Translated_518_residues MRRWLYIGLAVLLIGCGQALKATSSEVAPSTKPAAAPTIDLTALITWQPVPAYTPQIPTPTNIPIPTPIPDAWPNEQALA LRPEFAGDATHSTMPRYAMQITLEPNVGRYSGSQIITYTNTTGASINSLVLRSYNNFPPDAQGDGGDTTLEVTKAWSNGN ELNLAREAENTAFRLNLATSLAPNQQVVISTQFAGTIKAWPDGSYPLLSAYPMLAVWDAAANDWRMDVTRFPDRVFAETA LYRVQLKLPAEYQVIGAGTLLEQNADRTSRTYVSGPVREWAAALGQFSVSTSSIDGIDVNAYGPDYLDLARVREMAIGAL TSYQAKIGAYPYRKLDLHVMPWDSGGGIEYPAYTIILVNDGINRDADYVVFHEVAHQWWYGLLGNDVYREAWLDEAMASY LTYVATQDVLGQAAADSYYSGEIERLALSNQANGNWPAGLAINQYPSFNSYYRAVYGKGAAMLHQLRIKLGDQSFFQGLA QLNDQKRYQIITRSDFQSVMEQSSGQALGEWLDGWLNW >Mature_518_residues MRRWLYIGLAVLLIGCGQALKATSSEVAPSTKPAAAPTIDLTALITWQPVPAYTPQIPTPTNIPIPTPIPDAWPNEQALA LRPEFAGDATHSTMPRYAMQITLEPNVGRYSGSQIITYTNTTGASINSLVLRSYNNFPPDAQGDGGDTTLEVTKAWSNGN ELNLAREAENTAFRLNLATSLAPNQQVVISTQFAGTIKAWPDGSYPLLSAYPMLAVWDAAANDWRMDVTRFPDRVFAETA LYRVQLKLPAEYQVIGAGTLLEQNADRTSRTYVSGPVREWAAALGQFSVSTSSIDGIDVNAYGPDYLDLARVREMAIGAL TSYQAKIGAYPYRKLDLHVMPWDSGGGIEYPAYTIILVNDGINRDADYVVFHEVAHQWWYGLLGNDVYREAWLDEAMASY LTYVATQDVLGQAAADSYYSGEIERLALSNQANGNWPAGLAINQYPSFNSYYRAVYGKGAAMLHQLRIKLGDQSFFQGLA QLNDQKRYQIITRSDFQSVMEQSSGQALGEWLDGWLNW
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321837, Length=211, Percent_Identity=23.2227488151659, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI9755335, Length=251, Percent_Identity=24.3027888446215, Blast_Score=63, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57135; Mature: 57135
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWLYIGLAVLLIGCGQALKATSSEVAPSTKPAAAPTIDLTALITWQPVPAYTPQIPTP CCEEHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCC TNIPIPTPIPDAWPNEQALALRPEFAGDATHSTMPRYAMQITLEPNVGRYSGSQIITYTN CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEC TTGASINSLVLRSYNNFPPDAQGDGGDTTLEVTKAWSNGNELNLAREAENTAFRLNLATS CCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEEC LAPNQQVVISTQFAGTIKAWPDGSYPLLSAYPMLAVWDAAANDWRMDVTRFPDRVFAETA CCCCCEEEEEEECCCEEEECCCCCCCHHHHCCHHEEECCCCCCCEEEHHHCCHHHHHHHE LYRVQLKLPAEYQVIGAGTLLEQNADRTSRTYVSGPVREWAAALGQFSVSTSSIDGIDVN EEEEEEECCCCEEEEECCHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCEEEC AYGPDYLDLARVREMAIGALTSYQAKIGAYPYRKLDLHVMPWDSGGGIEYPAYTIILVND CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEC GINRDADYVVFHEVAHQWWYGLLGNDVYREAWLDEAMASYLTYVATQDVLGQAAADSYYS CCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEIERLALSNQANGNWPAGLAINQYPSFNSYYRAVYGKGAAMLHQLRIKLGDQSFFQGLA CCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH QLNDQKRYQIITRSDFQSVMEQSSGQALGEWLDGWLNW HCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MRRWLYIGLAVLLIGCGQALKATSSEVAPSTKPAAAPTIDLTALITWQPVPAYTPQIPTP CCEEHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCC TNIPIPTPIPDAWPNEQALALRPEFAGDATHSTMPRYAMQITLEPNVGRYSGSQIITYTN CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEC TTGASINSLVLRSYNNFPPDAQGDGGDTTLEVTKAWSNGNELNLAREAENTAFRLNLATS CCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEEC LAPNQQVVISTQFAGTIKAWPDGSYPLLSAYPMLAVWDAAANDWRMDVTRFPDRVFAETA CCCCCEEEEEEECCCEEEECCCCCCCHHHHCCHHEEECCCCCCCEEEHHHCCHHHHHHHE LYRVQLKLPAEYQVIGAGTLLEQNADRTSRTYVSGPVREWAAALGQFSVSTSSIDGIDVN EEEEEEECCCCEEEEECCHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCEEEC AYGPDYLDLARVREMAIGALTSYQAKIGAYPYRKLDLHVMPWDSGGGIEYPAYTIILVND CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEC GINRDADYVVFHEVAHQWWYGLLGNDVYREAWLDEAMASYLTYVATQDVLGQAAADSYYS CCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEIERLALSNQANGNWPAGLAINQYPSFNSYYRAVYGKGAAMLHQLRIKLGDQSFFQGLA CCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH QLNDQKRYQIITRSDFQSVMEQSSGQALGEWLDGWLNW HCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA