Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897062
Identifier: 159897062
GI number: 159897062
Start: 620755
End: 621171
Strand: Direct
Name: 159897062
Synonym: Haur_0533
Alternate gene names: NA
Gene position: 620755-621171 (Clockwise)
Preceding gene: 159897061
Following gene: 159897063
Centisome position: 9.78
GC content: 47.72
Gene sequence:
>417_bases ATGGAAGTAGAAGTAACCGTCAAAGGCATCATCGTGTTTGATGAAGCTGGAGTCTATGGCGAATATGAAGAGGTAGAGAT TGAAACCAAAGCGGTTTGGATACCTGGCTTTGGGCTACTGGTCAATGCAAATATTGGTATTGGCGGACACTATCCTCTGC TGCATTGTGCTGGTTTTGATAGCACTACCCATGCTGAGGCTGTTCGCACGGCGGTTGCCTACAGCGATGCCGTAATTCAC CATCTGACCAAGCATGAGGCGATGGTCAAAACCATTGATACCTATATGAGTGCCAAGAAAGCCTTTTACGCTCAGGGTGG AACGAATGCCAAACTTGAAGGCGCATTCCTTGATAGCCAAGAGCCACTTGATCAAGTTTGGGCAACCTTCACGTTTACCC CTGAGGCCTATGAATGA
Upstream 100 bases:
>100_bases TCCACCCATAACCCAAGGTGACATTGACCAAGGGATTAACCAGATTCGCTAGTGCGATGGCTGCCCAGCTGGGCAGCCAT TCGTTTTGAGGAGATCATCA
Downstream 100 bases:
>100_bases GCAACTACAAAATCATCATGAATTATGGCGATACCGAAGTTTCGCTAGCGATTGGCCGCCTTGATCAAGATGAAGCCTTG ATCATTCAACGGCAACTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MEVEVTVKGIIVFDEAGVYGEYEEVEIETKAVWIPGFGLLVNANIGIGGHYPLLHCAGFDSTTHAEAVRTAVAYSDAVIH HLTKHEAMVKTIDTYMSAKKAFYAQGGTNAKLEGAFLDSQEPLDQVWATFTFTPEAYE
Sequences:
>Translated_138_residues MEVEVTVKGIIVFDEAGVYGEYEEVEIETKAVWIPGFGLLVNANIGIGGHYPLLHCAGFDSTTHAEAVRTAVAYSDAVIH HLTKHEAMVKTIDTYMSAKKAFYAQGGTNAKLEGAFLDSQEPLDQVWATFTFTPEAYE >Mature_138_residues MEVEVTVKGIIVFDEAGVYGEYEEVEIETKAVWIPGFGLLVNANIGIGGHYPLLHCAGFDSTTHAEAVRTAVAYSDAVIH HLTKHEAMVKTIDTYMSAKKAFYAQGGTNAKLEGAFLDSQEPLDQVWATFTFTPEAYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15103; Mature: 15103
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVEVTVKGIIVFDEAGVYGEYEEVEIETKAVWIPGFGLLVNANIGIGGHYPLLHCAGFD CEEEEEEEEEEEEECCCCCCCCHHEEEEEEEEEECCCEEEEECCCCCCCCCCEEEEECCC STTHAEAVRTAVAYSDAVIHHLTKHEAMVKTIDTYMSAKKAFYAQGGTNAKLEGAFLDSQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCC EPLDQVWATFTFTPEAYE CCHHHHHEEEEECCCCCC >Mature Secondary Structure MEVEVTVKGIIVFDEAGVYGEYEEVEIETKAVWIPGFGLLVNANIGIGGHYPLLHCAGFD CEEEEEEEEEEEEECCCCCCCCHHEEEEEEEEEECCCEEEEECCCCCCCCCCEEEEECCC STTHAEAVRTAVAYSDAVIHHLTKHEAMVKTIDTYMSAKKAFYAQGGTNAKLEGAFLDSQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCC EPLDQVWATFTFTPEAYE CCHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA