Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897059
Identifier: 159897059
GI number: 159897059
Start: 617437
End: 618519
Strand: Direct
Name: 159897059
Synonym: Haur_0530
Alternate gene names: NA
Gene position: 617437-618519 (Clockwise)
Preceding gene: 159897058
Following gene: 159897060
Centisome position: 9.73
GC content: 48.75
Gene sequence:
>1083_bases ATGTCATACCCACAACCCTCTATGCCACCTTATATGCAACCAGTACCACCAAACAAGCCAGGCTGGCGGAAAAATATCAA ATGGATTGCAATTGGCAGTGTCGTGTTTGTGTGTTCATGTTTGGGACTCGCCTATAACCAAGGCTCAAAGCTACAGGCCG AGCAGACGGCTACGGCTATTGTAGTTGCTAATGTTACCGCAACCGCCCAGCAAAGCAATACGAATGCAACCAGTGAGGCG GTTGCGATTGCGGCGACCGTCGAGCAGGATAATGCCAATGCTACGAAGGAAGCTATTGCAATTGCGGCGACCCAGACTGA AGAGGCTCGGCCAACCAATACTCCAGTGCCAACCAATACACCGCTTCCGCCAACGGCAACGCCATTCGTAGCAGAGATTG GCCAAAGTAATCCGATTGGCCAATGGGAAATTACCATCCTCGATATCAGCATTGCGAATGATTTTAGCGAAGCGGCAACT GGTAAGTGGCTGGTTGTCCATGGGACGATAACCAACAAGGGCGATGACCACCTGATTGGTAAGCAAGAATTGAAGGTACG AACAGATACCAAAACAATTGAATTAGACCGGAATGCTTCCAACCAAGCGGCAAAACGCCTCAATGTTACCTCGATCGGCG ATTTAGGCGGGAAGATGATTAAGCGTGGTGAACGCGAAGAATGGGCAATTGCTTTCGATATTCCCCAAGACAGCAATGAG TTATGGTTTACGCTTGAAGGGACTGATGCCGTGAAGTTTGGGGCGATTGGTGAGACGGCAGAATTACCAACGGTAACACC ACGTCCAACTGCTACGGCGGTTCCTGATCTTGCCACCGAGGCGGGTGCTATTGATGTCTGTAAGCAGGCAGTCAAGCAAC GCCTTACCCATCCCTCAACCGCTGATTTCCCATGGTTCGATTATCAAACCGTGCAGGAAGGCGATCTAACTTGGTATGTC CAATCGACAGTCAAAGCGAAGAACTCGTTTAATCTGGAAGTGGAATTTGTATGGGTTTGTAAAGTAACTTATGAAGGCAA TAGCCGATGGAATATTGATGATGTACAAATGGCTGAACAATAG
Upstream 100 bases:
>100_bases GAAATCAGCCAAAAATCTTAATTCACTCCATCATGATCCAAAAAATGGGTCTGAATTGCACCTAACTTAGTTGAAGGAAA CGCTTTGTTTAGGAGACGCT
Downstream 100 bases:
>100_bases ACCATCCTAGATTAATCCCTTGCACCATGGAGCCAGTCGGCCCATGGTGCTTTTTTATGGTCTAAATCCTATTGTTGCCT TGGATACTACTCCAGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSYPQPSMPPYMQPVPPNKPGWRKNIKWIAIGSVVFVCSCLGLAYNQGSKLQAEQTATAIVVANVTATAQQSNTNATSEA VAIAATVEQDNANATKEAIAIAATQTEEARPTNTPVPTNTPLPPTATPFVAEIGQSNPIGQWEITILDISIANDFSEAAT GKWLVVHGTITNKGDDHLIGKQELKVRTDTKTIELDRNASNQAAKRLNVTSIGDLGGKMIKRGEREEWAIAFDIPQDSNE LWFTLEGTDAVKFGAIGETAELPTVTPRPTATAVPDLATEAGAIDVCKQAVKQRLTHPSTADFPWFDYQTVQEGDLTWYV QSTVKAKNSFNLEVEFVWVCKVTYEGNSRWNIDDVQMAEQ
Sequences:
>Translated_360_residues MSYPQPSMPPYMQPVPPNKPGWRKNIKWIAIGSVVFVCSCLGLAYNQGSKLQAEQTATAIVVANVTATAQQSNTNATSEA VAIAATVEQDNANATKEAIAIAATQTEEARPTNTPVPTNTPLPPTATPFVAEIGQSNPIGQWEITILDISIANDFSEAAT GKWLVVHGTITNKGDDHLIGKQELKVRTDTKTIELDRNASNQAAKRLNVTSIGDLGGKMIKRGEREEWAIAFDIPQDSNE LWFTLEGTDAVKFGAIGETAELPTVTPRPTATAVPDLATEAGAIDVCKQAVKQRLTHPSTADFPWFDYQTVQEGDLTWYV QSTVKAKNSFNLEVEFVWVCKVTYEGNSRWNIDDVQMAEQ >Mature_359_residues SYPQPSMPPYMQPVPPNKPGWRKNIKWIAIGSVVFVCSCLGLAYNQGSKLQAEQTATAIVVANVTATAQQSNTNATSEAV AIAATVEQDNANATKEAIAIAATQTEEARPTNTPVPTNTPLPPTATPFVAEIGQSNPIGQWEITILDISIANDFSEAATG KWLVVHGTITNKGDDHLIGKQELKVRTDTKTIELDRNASNQAAKRLNVTSIGDLGGKMIKRGEREEWAIAFDIPQDSNEL WFTLEGTDAVKFGAIGETAELPTVTPRPTATAVPDLATEAGAIDVCKQAVKQRLTHPSTADFPWFDYQTVQEGDLTWYVQ STVKAKNSFNLEVEFVWVCKVTYEGNSRWNIDDVQMAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39163; Mature: 39032
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPQPSMPPYMQPVPPNKPGWRKNIKWIAIGSVVFVCSCLGLAYNQGSKLQAEQTATAI CCCCCCCCCCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHHHHHHCCCCCCEECCCCEEEE VVANVTATAQQSNTNATSEAVAIAATVEQDNANATKEAIAIAATQTEEARPTNTPVPTNT EEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHEEEEEEECCCCCCCCCCCCCCCC PLPPTATPFVAEIGQSNPIGQWEITILDISIANDFSEAATGKWLVVHGTITNKGDDHLIG CCCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHCCCCEEEEEEEECCCCCCCCCC KQELKVRTDTKTIELDRNASNQAAKRLNVTSIGDLGGKMIKRGEREEWAIAFDIPQDSNE CCCEEEEECCEEEEECCCCCHHHHHCCCCEEEHHCCHHHHHCCCCCCEEEEEECCCCCCC LWFTLEGTDAVKFGAIGETAELPTVTPRPTATAVPDLATEAGAIDVCKQAVKQRLTHPST EEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCC ADFPWFDYQTVQEGDLTWYVQSTVKAKNSFNLEVEFVWVCKVTYEGNSRWNIDDVQMAEQ CCCCCCCCEEECCCCEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCEECCCHHHHCCC >Mature Secondary Structure SYPQPSMPPYMQPVPPNKPGWRKNIKWIAIGSVVFVCSCLGLAYNQGSKLQAEQTATAI CCCCCCCCCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHHHHHHCCCCCCEECCCCEEEE VVANVTATAQQSNTNATSEAVAIAATVEQDNANATKEAIAIAATQTEEARPTNTPVPTNT EEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHEEEEEEECCCCCCCCCCCCCCCC PLPPTATPFVAEIGQSNPIGQWEITILDISIANDFSEAATGKWLVVHGTITNKGDDHLIG CCCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHCCCCEEEEEEEECCCCCCCCCC KQELKVRTDTKTIELDRNASNQAAKRLNVTSIGDLGGKMIKRGEREEWAIAFDIPQDSNE CCCEEEEECCEEEEECCCCCHHHHHCCCCEEEHHCCHHHHHCCCCCCEEEEEECCCCCCC LWFTLEGTDAVKFGAIGETAELPTVTPRPTATAVPDLATEAGAIDVCKQAVKQRLTHPST EEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCC ADFPWFDYQTVQEGDLTWYVQSTVKAKNSFNLEVEFVWVCKVTYEGNSRWNIDDVQMAEQ CCCCCCCCEEECCCCEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA