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The map label for this gene is yigC [C]

Identifier: 159897050

GI number: 159897050

Start: 604739

End: 606220

Strand: Direct

Name: yigC [C]

Synonym: Haur_0520

Alternate gene names: 159897050

Gene position: 604739-606220 (Clockwise)

Preceding gene: 159897048

Following gene: 159897051

Centisome position: 9.53

GC content: 49.73

Gene sequence:

>1482_bases
GTGTCAACAAAAATACCTACTACTTTTGGTGATTTACGCGAATGGATCGCCTTTTTGGAAAAACGCGGCGAATTGAAACG
GATCAAAACGCCGGTTTCGGCTGATCTTGAAATCACTGAAATTACTGATCGCGTTTCTAAAATGAAGCAAGGTCAAGGAA
ATGTCGCTTTACTCTTTGAAAATGTGATTGGCTCAGATCTGCCAGTTTTGATCAATGGAGTGGGCACTGAGCAACGCATG
GCTTGGGCCTTGGGCTTAGAAAAACTCGACGATCTGCGGGCACGCTTGGCGAGTGTGGTTAAGCCTGAAGTTCCCGAGGG
GGTTTTCGACAAGCTTAAAAAAGTCAGCGAGCTTTCAGAAATTGTGCGCTATCGGCCTAAAACGGTTGCCAGCGCTCCCT
GCCAAGATATTGTCTGGACGGGCGACCAGATTGATTTGAATAAATTGCCAATTTTAAAATGCTGGCCCGATGATGGTGGC
CGCTACGTCACCCTAACCACAGTCATTTCACGCGATCCCTACAAAGGCATTCGCAATGTGGGGATGTATCGGGTGCAGGT
TTACGATGAAAAAACCGTCGGCATGCACTGGCAAATTCACAAAGGTGGCACTGAACATCAACGCGAGGCGCTGCGCAAAG
GTGGGGTGAAATTGCCGGTTGCCGTAGCAATTGGCGGCGATTATGCCACGATCTACTCGGGCTCGGCTCCACTGCCACCA
GGCATCGATGAAATTATGTTGGCTGGTTGGTTGCGGCGCGAACGGGTTGAGATGGTCAAATGCAAAACGATCGATCTCGA
AGTGCCCGCCAATGCCGAAATTATTCTCGAAGGTTATGTTGACCCCAGCGAAAGTCGGCTTGAAGGGCCATTCGGCGATC
ATACTGGCTACTATTCGCTGGCCGATCAATATCCCGTGATGCACCTGACCGCCATCACCATGCGCAAGGATGCGATTTAT
CCGACGACGATTGTGGGTTATCCACCGCAAGAAGATTATTGGCTTGGCAAAGCGACTGAGCGCTTGTTCTTGCCATTGAT
GCAGTTGGTCGTGCCTGAGGTGATCGATGTCAATATGCCTGCCGAAGGGACGTTCCATAATCTATTGGTGGTCAGCATCA
AGAAAAAATACCCCGGCCAAGTGCGCAAAGTGATGTATGGCCTGTGGGGCTTGATGCTCATGTCGTTGACCAAATTTATT
ATTGTGGTCGATGAAGATATTGATGTACAGGATATGAACCAAGTCTTGTTTCATGTCACATCGAATGTTGATCCGCAGCG
CGATACGGTGATTGTGGAAGGGCCACTTGATGCGCTCGACCACTCGGCAGATCATTTTGCTTATGGCCACAAAATGGGGA
TTGATGCTACCCGCAAGCGCCAAGATATCGATCGGTTTCCGCGTGAATGGCCTCAAGACATTCGCATGACCCAATCGATT
GTGGATCGGGTGACCAAACGCTGGCGTGAATATGGCTTCTAG

Upstream 100 bases:

>100_bases
TGGTGATAGGCTCGCTTGTTAATCCTAAACGGCTGAATCTGCGTAAATCGTGATACAATGCACAAAGATTGGCGAGCAGC
ATCTGCAATGGAGCGTTATT

Downstream 100 bases:

>100_bases
TTAATCGATTGCCTTGATCAAACAGCGCTGACCAATGTTGGTTGGCGCTGTTTTTTTATTAGGTGTGACAACGTTTGATC
GAAACAATTGTCGCATGGCT

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MSTKIPTTFGDLREWIAFLEKRGELKRIKTPVSADLEITEITDRVSKMKQGQGNVALLFENVIGSDLPVLINGVGTEQRM
AWALGLEKLDDLRARLASVVKPEVPEGVFDKLKKVSELSEIVRYRPKTVASAPCQDIVWTGDQIDLNKLPILKCWPDDGG
RYVTLTTVISRDPYKGIRNVGMYRVQVYDEKTVGMHWQIHKGGTEHQREALRKGGVKLPVAVAIGGDYATIYSGSAPLPP
GIDEIMLAGWLRRERVEMVKCKTIDLEVPANAEIILEGYVDPSESRLEGPFGDHTGYYSLADQYPVMHLTAITMRKDAIY
PTTIVGYPPQEDYWLGKATERLFLPLMQLVVPEVIDVNMPAEGTFHNLLVVSIKKKYPGQVRKVMYGLWGLMLMSLTKFI
IVVDEDIDVQDMNQVLFHVTSNVDPQRDTVIVEGPLDALDHSADHFAYGHKMGIDATRKRQDIDRFPREWPQDIRMTQSI
VDRVTKRWREYGF

Sequences:

>Translated_493_residues
MSTKIPTTFGDLREWIAFLEKRGELKRIKTPVSADLEITEITDRVSKMKQGQGNVALLFENVIGSDLPVLINGVGTEQRM
AWALGLEKLDDLRARLASVVKPEVPEGVFDKLKKVSELSEIVRYRPKTVASAPCQDIVWTGDQIDLNKLPILKCWPDDGG
RYVTLTTVISRDPYKGIRNVGMYRVQVYDEKTVGMHWQIHKGGTEHQREALRKGGVKLPVAVAIGGDYATIYSGSAPLPP
GIDEIMLAGWLRRERVEMVKCKTIDLEVPANAEIILEGYVDPSESRLEGPFGDHTGYYSLADQYPVMHLTAITMRKDAIY
PTTIVGYPPQEDYWLGKATERLFLPLMQLVVPEVIDVNMPAEGTFHNLLVVSIKKKYPGQVRKVMYGLWGLMLMSLTKFI
IVVDEDIDVQDMNQVLFHVTSNVDPQRDTVIVEGPLDALDHSADHFAYGHKMGIDATRKRQDIDRFPREWPQDIRMTQSI
VDRVTKRWREYGF
>Mature_492_residues
STKIPTTFGDLREWIAFLEKRGELKRIKTPVSADLEITEITDRVSKMKQGQGNVALLFENVIGSDLPVLINGVGTEQRMA
WALGLEKLDDLRARLASVVKPEVPEGVFDKLKKVSELSEIVRYRPKTVASAPCQDIVWTGDQIDLNKLPILKCWPDDGGR
YVTLTTVISRDPYKGIRNVGMYRVQVYDEKTVGMHWQIHKGGTEHQREALRKGGVKLPVAVAIGGDYATIYSGSAPLPPG
IDEIMLAGWLRRERVEMVKCKTIDLEVPANAEIILEGYVDPSESRLEGPFGDHTGYYSLADQYPVMHLTAITMRKDAIYP
TTIVGYPPQEDYWLGKATERLFLPLMQLVVPEVIDVNMPAEGTFHNLLVVSIKKKYPGQVRKVMYGLWGLMLMSLTKFII
VVDEDIDVQDMNQVLFHVTSNVDPQRDTVIVEGPLDALDHSADHFAYGHKMGIDATRKRQDIDRFPREWPQDIRMTQSIV
DRVTKRWREYGF

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=488, Percent_Identity=41.5983606557377, Blast_Score=387, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6320748, Length=525, Percent_Identity=25.5238095238095, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55810; Mature: 55679

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKIPTTFGDLREWIAFLEKRGELKRIKTPVSADLEITEITDRVSKMKQGQGNVALLFE
CCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
NVIGSDLPVLINGVGTEQRMAWALGLEKLDDLRARLASVVKPEVPEGVFDKLKKVSELSE
HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IVRYRPKTVASAPCQDIVWTGDQIDLNKLPILKCWPDDGGRYVTLTTVISRDPYKGIRNV
HHHCCCCHHCCCCCCCEEECCCEECCCCCCEEEECCCCCCEEEEEEEEECCCHHHHHHCC
GMYRVQVYDEKTVGMHWQIHKGGTEHQREALRKGGVKLPVAVAIGGDYATIYSGSAPLPP
CEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCC
GIDEIMLAGWLRRERVEMVKCKTIDLEVPANAEIILEGYVDPSESRLEGPFGDHTGYYSL
CHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCCCCEEC
ADQYPVMHLTAITMRKDAIYPTTIVGYPPQEDYWLGKATERLFLPLMQLVVPEVIDVNMP
CCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
AEGTFHNLLVVSIKKKYPGQVRKVMYGLWGLMLMSLTKFIIVVDEDIDVQDMNQVLFHVT
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHH
SNVDPQRDTVIVEGPLDALDHSADHFAYGHKMGIDATRKRQDIDRFPREWPQDIRMTQSI
CCCCCCCCEEEEECCHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VDRVTKRWREYGF
HHHHHHHHHHCCC
>Mature Secondary Structure 
STKIPTTFGDLREWIAFLEKRGELKRIKTPVSADLEITEITDRVSKMKQGQGNVALLFE
CCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
NVIGSDLPVLINGVGTEQRMAWALGLEKLDDLRARLASVVKPEVPEGVFDKLKKVSELSE
HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IVRYRPKTVASAPCQDIVWTGDQIDLNKLPILKCWPDDGGRYVTLTTVISRDPYKGIRNV
HHHCCCCHHCCCCCCCEEECCCEECCCCCCEEEECCCCCCEEEEEEEEECCCHHHHHHCC
GMYRVQVYDEKTVGMHWQIHKGGTEHQREALRKGGVKLPVAVAIGGDYATIYSGSAPLPP
CEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCC
GIDEIMLAGWLRRERVEMVKCKTIDLEVPANAEIILEGYVDPSESRLEGPFGDHTGYYSL
CHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCCCCEEC
ADQYPVMHLTAITMRKDAIYPTTIVGYPPQEDYWLGKATERLFLPLMQLVVPEVIDVNMP
CCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
AEGTFHNLLVVSIKKKYPGQVRKVMYGLWGLMLMSLTKFIIVVDEDIDVQDMNQVLFHVT
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHH
SNVDPQRDTVIVEGPLDALDHSADHFAYGHKMGIDATRKRQDIDRFPREWPQDIRMTQSI
CCCCCCCCEEEEECCHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VDRVTKRWREYGF
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]