Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896965
Identifier: 159896965
GI number: 159896965
Start: 505882
End: 506718
Strand: Direct
Name: 159896965
Synonym: Haur_0433
Alternate gene names: NA
Gene position: 505882-506718 (Clockwise)
Preceding gene: 159896964
Following gene: 159896966
Centisome position: 7.97
GC content: 52.69
Gene sequence:
>837_bases GTGCTGATTATCCGAGTGCCCCATGAATCGCCCCGTTTGTTGCGCTTAGATTTAGTCACCAATCAGCTTTCTGCATTTGA AACAACGTTCCAGCCGAATGATTACCGACGGATTGAGCCGCTGGCCTGGCATGGACAAACACTCTATGTCTTGTTTCATG ATCAACCAAATGGCTCCGCTACGCTCCAGCCAGTGTTAGCCAAGCTAACGCTTAACCAACAAGCTAAAATCGAGATTTTA GCCGAATTAGCCGATTGGCCTGATTATTGGGTCAGTGCCAACCAACAAGCCCTCGTTTATCGCCAAAGCCAAACGGCCAC TGAACAAACGCTGGTCTGGTGGAATTTAACCGATCAAACCTCACGCACGCTCACATTGCCGTTGGTATCGCACGCTGCCC TAGCCTTGGCTCCCGATGGCTCGGCCTTGGCGATGGTCACGCTTGACCCAACCCAGCAGGTGGCCGAATTGCGCCGCTAC GACTATGCCAGCCAAACTTGGCAGACACTTGATCAACAGGCAAGCGGTCAGATTGTCACCACCAATCCTGTTGTTGGTTG GTCGGCGGATAGTCAACATTTGTGGTGGCAACGAAGTTTGCCACAGCCGTTGCTTGCCAAGGAGTATCGCGTGTACACAG CAACCGGAGCGTTGCAATCGACTGACGAATTGCCATTGCATCACCAGGCGGTGGTGAGTGCGGATGCTGAAACTCTCGTT TTAGTTGGGGTGGCGGGCACAATGCTTCAAGAACGCCAACATGGGCGCATAACCGCCCAGTTTCCTTTGCCCGTTGATCT CTTGGAGCAAAAGGTGCTAGCTGGAGTCAATCGCTAA
Upstream 100 bases:
>100_bases TGATCCACAAATGCAGACCCATACTCAAATTGAGTATACGAACCCAGATTATGTATTCAATGGGATGAGTCAAGCTTTGA TCGATCCCAATTTGTAACAA
Downstream 100 bases:
>100_bases AAGCCAGACCCCAGCTTGGTTGTTACCAAACTGGGGTTTTCGATTAAGTTGCTGCTTAGTACTCATTGGCAGCTAGAGTT TCGCCCCACGGCATTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLIIRVPHESPRLLRLDLVTNQLSAFETTFQPNDYRRIEPLAWHGQTLYVLFHDQPNGSATLQPVLAKLTLNQQAKIEIL AELADWPDYWVSANQQALVYRQSQTATEQTLVWWNLTDQTSRTLTLPLVSHAALALAPDGSALAMVTLDPTQQVAELRRY DYASQTWQTLDQQASGQIVTTNPVVGWSADSQHLWWQRSLPQPLLAKEYRVYTATGALQSTDELPLHHQAVVSADAETLV LVGVAGTMLQERQHGRITAQFPLPVDLLEQKVLAGVNR
Sequences:
>Translated_278_residues MLIIRVPHESPRLLRLDLVTNQLSAFETTFQPNDYRRIEPLAWHGQTLYVLFHDQPNGSATLQPVLAKLTLNQQAKIEIL AELADWPDYWVSANQQALVYRQSQTATEQTLVWWNLTDQTSRTLTLPLVSHAALALAPDGSALAMVTLDPTQQVAELRRY DYASQTWQTLDQQASGQIVTTNPVVGWSADSQHLWWQRSLPQPLLAKEYRVYTATGALQSTDELPLHHQAVVSADAETLV LVGVAGTMLQERQHGRITAQFPLPVDLLEQKVLAGVNR >Mature_278_residues MLIIRVPHESPRLLRLDLVTNQLSAFETTFQPNDYRRIEPLAWHGQTLYVLFHDQPNGSATLQPVLAKLTLNQQAKIEIL AELADWPDYWVSANQQALVYRQSQTATEQTLVWWNLTDQTSRTLTLPLVSHAALALAPDGSALAMVTLDPTQQVAELRRY DYASQTWQTLDQQASGQIVTTNPVVGWSADSQHLWWQRSLPQPLLAKEYRVYTATGALQSTDELPLHHQAVVSADAETLV LVGVAGTMLQERQHGRITAQFPLPVDLLEQKVLAGVNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31200; Mature: 31200
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIRVPHESPRLLRLDLVTNQLSAFETTFQPNDYRRIEPLAWHGQTLYVLFHDQPNGSA CEEEECCCCCCCEEEEEEHHHHHHHHEECCCCCCCCCCCEEEECCCEEEEEEEECCCCCC TLQPVLAKLTLNQQAKIEILAELADWPDYWVSANQQALVYRQSQTATEQTLVWWNLTDQT HHHHHHHHHHCCCCHHHHHEEHHHCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCC SRTLTLPLVSHAALALAPDGSALAMVTLDPTQQVAELRRYDYASQTWQTLDQQASGQIVT CCEEEEEECCCEEEEECCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE TNPVVGWSADSQHLWWQRSLPQPLLAKEYRVYTATGALQSTDELPLHHQAVVSADAETLV CCCEEECCCCCCCEEEECCCCCCHHHCCEEEEEECCCCCCCCCCCCCHHHEEECCCCEEE LVGVAGTMLQERQHGRITAQFPLPVDLLEQKVLAGVNR EEECHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure MLIIRVPHESPRLLRLDLVTNQLSAFETTFQPNDYRRIEPLAWHGQTLYVLFHDQPNGSA CEEEECCCCCCCEEEEEEHHHHHHHHEECCCCCCCCCCCEEEECCCEEEEEEEECCCCCC TLQPVLAKLTLNQQAKIEILAELADWPDYWVSANQQALVYRQSQTATEQTLVWWNLTDQT HHHHHHHHHHCCCCHHHHHEEHHHCCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCC SRTLTLPLVSHAALALAPDGSALAMVTLDPTQQVAELRRYDYASQTWQTLDQQASGQIVT CCEEEEEECCCEEEEECCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE TNPVVGWSADSQHLWWQRSLPQPLLAKEYRVYTATGALQSTDELPLHHQAVVSADAETLV CCCEEECCCCCCCEEEECCCCCCHHHCCEEEEEECCCCCCCCCCCCCHHHEEECCCCEEE LVGVAGTMLQERQHGRITAQFPLPVDLLEQKVLAGVNR EEECHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA