Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896958
Identifier: 159896958
GI number: 159896958
Start: 495956
End: 498265
Strand: Direct
Name: 159896958
Synonym: Haur_0426
Alternate gene names: NA
Gene position: 495956-498265 (Clockwise)
Preceding gene: 159896957
Following gene: 159896959
Centisome position: 7.81
GC content: 49.13
Gene sequence:
>2310_bases ATGCGCTGGATACGCTGGTGTTGGCTGCTGTTGCTGATAGCCCTACCGATCAGTGCAGCATCGAGCCAAGAGCAATCAAA TAATGGGCTAGTTTGGCAGGTTGAGCCAGTTTTTGGCACAGTTTATCGCGCTGGTGAGTGGATGGCTTTGCGGGTTAAGG TCAGCAATACTGGCGTTGATCGCATGGTCGAAATTCATATTGGCAACTACAATGTTGAGCTTGATGTGCCAGGTGGCTCG CAAAAAGAAACTTTGGTCTATGGCCAATTTGATCAGGCCTTTCGGGTGCCAATGGCCATGTATTTAAATGGTGAGAAGCG CGAAACCGCTACGCTGCAACTACGTTCCACCGATCGCCCAATGGTCGCAACCTTGCTGGAACAGCCACTACCCCAATTAA CCAAAGTGGTATTAGTTGCCACTGATAGCCAACAATTGCCCAACGTTCAGATTGGCCTTGATATGCTGAGTGGGATTGTG CTCAATCAGCGTTCATGGGGCGAACTCACTCCTGAGCAACAGCAAGCGATCAAGCAATGGGTCAATAACGGCGGGGTGTT GGTCGCTGAGCCAAATCTGCTCGAAGATTTACCAGCCGAACTCCAACCAGCTCAAGCTACTGGCCAGCAAACGATTGCCA CCACAACCCTAAGTCAAGTGTTTGGTCAACCATTTAATGTGCCAAACTTGGATGTTGCCCTACTTCAGCCCAATCAACAA GCAGCGACCAGCCTCAAACAAGAGCAAACGCCGCTGTTGGTTAAGCGCTCGGTTGGCCGTGGCTTCGTGATTGCCAGCGC CTTTAATTTTGATCAAGCTGAAATTACGGCGTGGCGGGGCTATGAAAACCTACTGGCGTCGCTCTTCCCCCAGCAACAAG ATCTAGGCTGGATGGGTGCTGGTAGCAGTGAAAGTATGTTACGTGATAGTGCCGCGCCTGCCTTGCTGAACAATTTGCCA GCCCTCGATTTGCCGCCACTGCAAACGCTGTTAATTCTTTTGGGAATTTATATTGTTTTGGCCGGGCCAGTCACTTATCT TGTGTTACGGCGGCTTGATCGCATGGCCTTAGCTTGGCTGACGATTCCGACATTAACCTTAATTTTTGCCGTGCTAGCCT ATGGAATTGGCTCGAAACAACGGGGCACTGATATTTTGGTTCACGATGTGGCCTTGATTTACCCTGACGAGCAAGCGAAT GCCACGGTCTTAGGCTATGCGGGTATTTTCTCGCCAGTACGCGAAGACTATCAAGTTACAATCAACCATGGCGCATACCC TCGCCCATTGTTGGTTAACCCCAATCTGGGCACTAATGGTGGCATTAACGCCACCAGAGCGCTCTACAGTCATCAGCCAG GCGATGTGCGTAATCTCACGATCAATCAATGGTCGATGGAAATGTTTGCCTACGAACGTGATATCAGCGATGCGCCGCAT GTGCAAATCGAAATCAGCCTGCAAGGTAAAAAAATTATTGGCAAGGTCAAAAATACCAGCACCTATACGTTGAGTGATGC GGCGTTTATTATGTTGGGCAATGCTCAAAAGTTTGGCACAATCGAGCCAGGCGCTGAAAAATCGATCGAATTGCAAATCA ACAATAATCCCTCGATGTCTGGGGCAAGTTATTTGTTGTTTCAAAAAGAGCTTGATGAAGGCTATCAGACTGAATTTGGC CCGCCACGTGAGCTTTTGGCCAAAACCCAGGCGCTCGATATTGCCCTTCCTACCACCTATGGCAGTATCGATCGGAATGC AGTATTTGTAGCATTTGTCGATTTCAATCAAGCAGTAATCGACTTGCCGGAAAAACGCTTTGCTGCGACCCAACGTAGTC TGCTCATTCAATATCCGCAACTGCGCTATAGCCAAAATGCCGTTGAACTGACCAATAATTGGTTTAGCTATATCTTAGAA GACGACCCAAATATGGGCATGGGTTCAACCTGCACAACCAGTGCTCGTGGTGCTGGCACCAACATCTCACAAAAAACTGG CATTATTCAACTTAGCCTACCCACAACATTTAGCTCAATCGAAGCCCAGTCGTTACGGCTCTTGCCAACGATCGATGGTG GCATGGTTGCGCCCAACAAATTAACCTACGAACTATACAACTGGGCTACTAGTCAATGGGATGTCGTTGAATTCAAAAAT GGAGCGATTGATCTGACCACCAGCCCCAGCACCTATTTGCAACAAGGCAACTTGCGCACCCGCTACACCCTCGATCCAAC GGTTGATACCACGGCAGGGCTATGGGGTTGCTTCTCGGTTGGGCCAGTGCTTTCGGGAGTTGTCAAATGA
Upstream 100 bases:
>100_bases TGCTGATATTGCTGAGAGTTGCTTGAAAAAGGGAACACAATTGGCCTGCTATCCGTTATGATAGGAACAGCCGAATCGAT TTTAGTGTGTGGAGCATGGT
Downstream 100 bases:
>100_bases GCGAATTAGCGATCCAAACTGTTGATTTGTTGCGGCGCTATGGCAAATACACTGCTGTCAACAAGCTTAATTTGAAGATC ACACTTGGTAGCATTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 769; Mature: 769
Protein sequence:
>769_residues MRWIRWCWLLLLIALPISAASSQEQSNNGLVWQVEPVFGTVYRAGEWMALRVKVSNTGVDRMVEIHIGNYNVELDVPGGS QKETLVYGQFDQAFRVPMAMYLNGEKRETATLQLRSTDRPMVATLLEQPLPQLTKVVLVATDSQQLPNVQIGLDMLSGIV LNQRSWGELTPEQQQAIKQWVNNGGVLVAEPNLLEDLPAELQPAQATGQQTIATTTLSQVFGQPFNVPNLDVALLQPNQQ AATSLKQEQTPLLVKRSVGRGFVIASAFNFDQAEITAWRGYENLLASLFPQQQDLGWMGAGSSESMLRDSAAPALLNNLP ALDLPPLQTLLILLGIYIVLAGPVTYLVLRRLDRMALAWLTIPTLTLIFAVLAYGIGSKQRGTDILVHDVALIYPDEQAN ATVLGYAGIFSPVREDYQVTINHGAYPRPLLVNPNLGTNGGINATRALYSHQPGDVRNLTINQWSMEMFAYERDISDAPH VQIEISLQGKKIIGKVKNTSTYTLSDAAFIMLGNAQKFGTIEPGAEKSIELQINNNPSMSGASYLLFQKELDEGYQTEFG PPRELLAKTQALDIALPTTYGSIDRNAVFVAFVDFNQAVIDLPEKRFAATQRSLLIQYPQLRYSQNAVELTNNWFSYILE DDPNMGMGSTCTTSARGAGTNISQKTGIIQLSLPTTFSSIEAQSLRLLPTIDGGMVAPNKLTYELYNWATSQWDVVEFKN GAIDLTTSPSTYLQQGNLRTRYTLDPTVDTTAGLWGCFSVGPVLSGVVK
Sequences:
>Translated_769_residues MRWIRWCWLLLLIALPISAASSQEQSNNGLVWQVEPVFGTVYRAGEWMALRVKVSNTGVDRMVEIHIGNYNVELDVPGGS QKETLVYGQFDQAFRVPMAMYLNGEKRETATLQLRSTDRPMVATLLEQPLPQLTKVVLVATDSQQLPNVQIGLDMLSGIV LNQRSWGELTPEQQQAIKQWVNNGGVLVAEPNLLEDLPAELQPAQATGQQTIATTTLSQVFGQPFNVPNLDVALLQPNQQ AATSLKQEQTPLLVKRSVGRGFVIASAFNFDQAEITAWRGYENLLASLFPQQQDLGWMGAGSSESMLRDSAAPALLNNLP ALDLPPLQTLLILLGIYIVLAGPVTYLVLRRLDRMALAWLTIPTLTLIFAVLAYGIGSKQRGTDILVHDVALIYPDEQAN ATVLGYAGIFSPVREDYQVTINHGAYPRPLLVNPNLGTNGGINATRALYSHQPGDVRNLTINQWSMEMFAYERDISDAPH VQIEISLQGKKIIGKVKNTSTYTLSDAAFIMLGNAQKFGTIEPGAEKSIELQINNNPSMSGASYLLFQKELDEGYQTEFG PPRELLAKTQALDIALPTTYGSIDRNAVFVAFVDFNQAVIDLPEKRFAATQRSLLIQYPQLRYSQNAVELTNNWFSYILE DDPNMGMGSTCTTSARGAGTNISQKTGIIQLSLPTTFSSIEAQSLRLLPTIDGGMVAPNKLTYELYNWATSQWDVVEFKN GAIDLTTSPSTYLQQGNLRTRYTLDPTVDTTAGLWGCFSVGPVLSGVVK >Mature_769_residues MRWIRWCWLLLLIALPISAASSQEQSNNGLVWQVEPVFGTVYRAGEWMALRVKVSNTGVDRMVEIHIGNYNVELDVPGGS QKETLVYGQFDQAFRVPMAMYLNGEKRETATLQLRSTDRPMVATLLEQPLPQLTKVVLVATDSQQLPNVQIGLDMLSGIV LNQRSWGELTPEQQQAIKQWVNNGGVLVAEPNLLEDLPAELQPAQATGQQTIATTTLSQVFGQPFNVPNLDVALLQPNQQ AATSLKQEQTPLLVKRSVGRGFVIASAFNFDQAEITAWRGYENLLASLFPQQQDLGWMGAGSSESMLRDSAAPALLNNLP ALDLPPLQTLLILLGIYIVLAGPVTYLVLRRLDRMALAWLTIPTLTLIFAVLAYGIGSKQRGTDILVHDVALIYPDEQAN ATVLGYAGIFSPVREDYQVTINHGAYPRPLLVNPNLGTNGGINATRALYSHQPGDVRNLTINQWSMEMFAYERDISDAPH VQIEISLQGKKIIGKVKNTSTYTLSDAAFIMLGNAQKFGTIEPGAEKSIELQINNNPSMSGASYLLFQKELDEGYQTEFG PPRELLAKTQALDIALPTTYGSIDRNAVFVAFVDFNQAVIDLPEKRFAATQRSLLIQYPQLRYSQNAVELTNNWFSYILE DDPNMGMGSTCTTSARGAGTNISQKTGIIQLSLPTTFSSIEAQSLRLLPTIDGGMVAPNKLTYELYNWATSQWDVVEFKN GAIDLTTSPSTYLQQGNLRTRYTLDPTVDTTAGLWGCFSVGPVLSGVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84609; Mature: 84609
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWIRWCWLLLLIALPISAASSQEQSNNGLVWQVEPVFGTVYRAGEWMALRVKVSNTGVD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHEEHEECCCEEEEEEEECCCCCC RMVEIHIGNYNVELDVPGGSQKETLVYGQFDQAFRVPMAMYLNGEKRETATLQLRSTDRP EEEEEEECCEEEEEECCCCCCCCEEEEECCCHHHCCCEEEEECCCCCCEEEEEEECCCCH MVATLLEQPLPQLTKVVLVATDSQQLPNVQIGLDMLSGIVLNQRSWGELTPEQQQAIKQW HHHHHHHCCCHHHEEEEEEEECCCCCCCEEEEHHHHCCEEECCCCCCCCCHHHHHHHHHH VNNGGVLVAEPNLLEDLPAELQPAQATGQQTIATTTLSQVFGQPFNVPNLDVALLQPNQQ HCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH AATSLKQEQTPLLVKRSVGRGFVIASAFNFDQAEITAWRGYENLLASLFPQQQDLGWMGA HHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCEECC GSSESMLRDSAAPALLNNLPALDLPPLQTLLILLGIYIVLAGPVTYLVLRRLDRMALAWL CCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIPTLTLIFAVLAYGIGSKQRGTDILVHDVALIYPDEQANATVLGYAGIFSPVREDYQVT HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHHHCCCCEEEE INHGAYPRPLLVNPNLGTNGGINATRALYSHQPGDVRNLTINQWSMEMFAYERDISDAPH ECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCE VQIEISLQGKKIIGKVKNTSTYTLSDAAFIMLGNAQKFGTIEPGAEKSIELQINNNPSMS EEEEEEECCCEEEEEECCCCEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC GASYLLFQKELDEGYQTEFGPPRELLAKTQALDIALPTTYGSIDRNAVFVAFVDFNQAVI CCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCEE DLPEKRFAATQRSLLIQYPQLRYSQNAVELTNNWFSYILEDDPNMGMGSTCTTSARGAGT CCCHHHHHHHHHHHEEECCCHHCCCCHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCC NISQKTGIIQLSLPTTFSSIEAQSLRLLPTIDGGMVAPNKLTYELYNWATSQWDVVEFKN CCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEECCCCEEEEEECCCCCCEEEEEECC GAIDLTTSPSTYLQQGNLRTRYTLDPTVDTTAGLWGCFSVGPVLSGVVK CEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRWIRWCWLLLLIALPISAASSQEQSNNGLVWQVEPVFGTVYRAGEWMALRVKVSNTGVD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHEEHEECCCEEEEEEEECCCCCC RMVEIHIGNYNVELDVPGGSQKETLVYGQFDQAFRVPMAMYLNGEKRETATLQLRSTDRP EEEEEEECCEEEEEECCCCCCCCEEEEECCCHHHCCCEEEEECCCCCCEEEEEEECCCCH MVATLLEQPLPQLTKVVLVATDSQQLPNVQIGLDMLSGIVLNQRSWGELTPEQQQAIKQW HHHHHHHCCCHHHEEEEEEEECCCCCCCEEEEHHHHCCEEECCCCCCCCCHHHHHHHHHH VNNGGVLVAEPNLLEDLPAELQPAQATGQQTIATTTLSQVFGQPFNVPNLDVALLQPNQQ HCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH AATSLKQEQTPLLVKRSVGRGFVIASAFNFDQAEITAWRGYENLLASLFPQQQDLGWMGA HHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCEECC GSSESMLRDSAAPALLNNLPALDLPPLQTLLILLGIYIVLAGPVTYLVLRRLDRMALAWL CCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIPTLTLIFAVLAYGIGSKQRGTDILVHDVALIYPDEQANATVLGYAGIFSPVREDYQVT HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHHHCCCCEEEE INHGAYPRPLLVNPNLGTNGGINATRALYSHQPGDVRNLTINQWSMEMFAYERDISDAPH ECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCE VQIEISLQGKKIIGKVKNTSTYTLSDAAFIMLGNAQKFGTIEPGAEKSIELQINNNPSMS EEEEEEECCCEEEEEECCCCEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC GASYLLFQKELDEGYQTEFGPPRELLAKTQALDIALPTTYGSIDRNAVFVAFVDFNQAVI CCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCEE DLPEKRFAATQRSLLIQYPQLRYSQNAVELTNNWFSYILEDDPNMGMGSTCTTSARGAGT CCCHHHHHHHHHHHEEECCCHHCCCCHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCC NISQKTGIIQLSLPTTFSSIEAQSLRLLPTIDGGMVAPNKLTYELYNWATSQWDVVEFKN CCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEECCCCEEEEEECCCCCCEEEEEECC GAIDLTTSPSTYLQQGNLRTRYTLDPTVDTTAGLWGCFSVGPVLSGVVK CEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA