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The map label for this gene is alr2 [H]

Identifier: 15926979

GI number: 15926979

Start: 1405654

End: 1406739

Strand: Direct

Name: alr2 [H]

Synonym: SA1231

Alternate gene names: 15926979

Gene position: 1405654-1406739 (Clockwise)

Preceding gene: 15926978

Following gene: 15926980

Centisome position: 49.94

GC content: 33.89

Gene sequence:

>1086_bases
TTGACAGCAACATGGTCTGTAAATAAGAAAATATTTTTACAAAATGCAATCACAGTCAAAAACAATCAGCCATTAATGGC
AGTTGTTAAAAATAATGCATATCACTATGACCTAGAATTTGCTGTAACTCAGTTTATCCATGCAGGTATAGATACATTTA
GCACAACATCACTACGAGAAGCAATTCAAATTAGACAACTTGCTCCAGATGCAACAATCTTTTTAATGAATGCAGTTTAC
GAGTTTGATTTAGTCCGCGAACATCAAATACACATGACTTTGCCGTCGTTGACATATTACTATAACCATAAAAATGATTT
AGCAGGTATTCATGTTCACTTAGAATTTGAAAATTTATTACATCGGTCTGGATTTAAAGATTTAAACGAAATTAAAGAAG
TATTGAAAGATCACCATCATAATCAAAATGCAAAAATGATTATTAGTGGTTTATGGACCCATTTTGGATATGCTGATGAA
TTCGATGTGTCAGATTATAATGTTGAACGTTCACAATGGATGGAAATTGTTGAAGCACTTTTATCTGAAGGTTATCAGTT
CGACCTAATCCATGCTCAAAATAGTGCGAGTTTTTATCGGGAAGGACAAATATTACTACCCCACCATACACATGCGCGTG
TAGGTATTGCGTTATACGGTTCAAGACCATATAGTTCACTGAATCAACATGATATAGTTCAGTCATTAACTGTAAAAGCA
CATGTTATTCAAGTGCGCGAAGTACAAGCTGGTGATTATTGCGGTTATAGCTTTGCCTTTGAAGTGACTAAAAACAATAC
AAAATTAGCTGTAGTTGATATCGGTTATGGCGATGGAATTTTAAGAACTCGTGCTAAACATGAAGCACTTATCAATGGTA
AACGCTACCCGATACGTGCATTAATGATGAGCCATATGTTTGTTGAAGTAGATGGCAATGTACATGCACAAGATGAAGTT
ATTCTTTATAATAATGATATCCGCATCGATGAATATACCTTTAAAGGTGTTGGTGCAAATTCTGAACAATTAAGTGCTAT
GAATCATGATTCTTTAAAAAAGGAGTACATTTCAAATGACTGTTAA

Upstream 100 bases:

>100_bases
GGTTTGCACACATCACATTTAAATTTTGATGAAAAAGCGTTAATAAACGTGGTTAATTTTTACGAAAATTTATTAAATAA
TTACAAAGAGGTGTAATACA

Downstream 100 bases:

>100_bases
ATATAATCAAAATGGCGAATTAACAATGGATGGTATTAGTTTAAAAACGATTGCACAAAGCTTTGGTACACCTACCATTG
TTTATGATGAACTACAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVY
EFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADE
FDVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEV
ILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISNDC

Sequences:

>Translated_361_residues
MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVY
EFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADE
FDVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEV
ILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISNDC
>Mature_360_residues
TATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVYE
FDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEF
DVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKAH
VIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEVI
LYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISNDC

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 41396; Mature: 41265

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
CCCEEECCCEEEEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCHHHHHH
AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
HHHHHHCCCCCEEEEEHHHHHHHHEEEEEEEEEECCEEEEECCCCCEEEEEEEEEHHHHH
HRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
HHCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HHCCCEEEEEEECCCCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEE
HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
EEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
HHHHEEEEEECCCEECCCEEEEEECCEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHCCC
C
C
>Mature Secondary Structure 
TATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
CCEEECCCEEEEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCHHHHHH
AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
HHHHHHCCCCCEEEEEHHHHHHHHEEEEEEEEEECCEEEEECCCCCEEEEEEEEEHHHHH
HRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
HHCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HHCCCEEEEEEECCCCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEE
HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
EEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
HHHHEEEEEECCCEECCCEEEEEECCEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11447207 [H]