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The map label for this gene is glcT

Identifier: 15926937

GI number: 15926937

Start: 1360937

End: 1361788

Strand: Direct

Name: glcT

Synonym: SA1191

Alternate gene names: 15926937

Gene position: 1360937-1361788 (Clockwise)

Preceding gene: 15926936

Following gene: 15926938

Centisome position: 48.35

GC content: 27.7

Gene sequence:

>852_bases
ATGGGAGAATATATTGTTACTAAAACATTGAACAACAATGTCGTAGTATGTACTAATAATGATCAAGAAGTTATTTTAAT
CGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAAT
TAGAAAGTGAGCAACAAAAAGCACATTATAAAAGTTTAGTTGAAATCGCTGATGATAATGTATTACAAGTAATTATTGAT
TCGTTGAATTTTATTTCTAATACTGCGATGAATGTTGATTCAAAACAACTTGTAGTTTCATTAACGGATCATATTATATT
TGCTTATAAACGCTTAAAACAAAATCAAGTTATTAGCAATCCATTTGTTATGGAAACTATGCAGTTATATAGTGATGCAT
ATCATATTGCTAAACAGGTGATTGATCAGTTAAATGCAGCATTAGATGTACATTTTCCTGAAGATGAGATAGGATTTATT
GCATTACATATTGCATCTAATACAGAAGATTTATCTATGCATGAGATGACCTTGATCAATAATGTTATTAAAAAAGGTAT
AGATATCATTGAATCAGACCTTGTGACAACTGTTGATAAGGAATCATTACAATACCAACGTTTTATAAGGCACGTACAAT
TTTTAATTCGCCGATTAAGAAGAAAAGAATATATACATGCACAAGATGATTTTGTGTCTATGATTAAAAATCACTATCCG
ATTTGCTATAACACAGCATATAAAATTTTAACTATGATACAAAAACAATTTGATGTTAATATCAGTGAGTCTGAAATTAT
ATATTTAACATTACACATTCATCATTTTGAAGAAAGGATTAATCAATCCTAA

Upstream 100 bases:

>100_bases
AGGATAGGCGTGTAATAGAACACAAGTATTTAAATTATTATACTTTCAAGTTAGACATTTCCGATATATAATCTTAATAA
TAGAAAAATAGGTGATGATA

Downstream 100 bases:

>100_bases
ATTAAGTGTATTACACGGGCGTTTCGTTACTGTAAAGGGTATTTGTATGGTATCATTGATGTTAGTAATTTTACATAAGT
GGACTGTTTTTATACAACAT

Product: transcription antiterminator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIID
SLNFISNTAMNVDSKQLVVSLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFI
ALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS

Sequences:

>Translated_283_residues
MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIID
SLNFISNTAMNVDSKQLVVSLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFI
ALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS
>Mature_282_residues
GEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIIDS
LNFISNTAMNVDSKQLVVSLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFIA
LHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYPI
CYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS

Specific function: Mediates The Positive Regulation Of The Beta-Glucoside (Bgl) Operon By Functioning As A Transcriptional Antiterminator. This Is A RNA-Binding Protein That Recognizes A Specific Sequence Located Just Upstream Of Two Termination Sites Within The Operon. [C

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains

Homologues:

Organism=Escherichia coli, GI1790160, Length=274, Percent_Identity=31.021897810219, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLCT_STAA1 (A7X215)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001441935.1
- ProteinModelPortal:   A7X215
- STRING:   A7X215
- EnsemblBacteria:   EBSTAT00000004270
- GeneID:   5559950
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1345
- eggNOG:   COG3711
- GeneTree:   EBGT00050000023805
- HOGENOM:   HBG515578
- OMA:   EHIHIGL
- ProtClustDB:   CLSK885296
- BioCyc:   SAUR418127:SAHV_1345-MONOMER
- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550
- Gene3D:   G3DSA:2.30.24.10
- Gene3D:   G3DSA:1.10.1790.10

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD; SSF50151 CAT_RBD; SSF63520 PRD

EC number: NA

Molecular weight: Translated: 32823; Mature: 32692

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00654 PRD_1; PS51372 PRD_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQK
CCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEECCCEEEHHHHHHHCCHHHH
AHYKSLVEIADDNVLQVIIDSLNFISNTAMNVDSKQLVVSLTDHIIFAYKRLKQNQVISN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFIALHIASNTEDLSMHEMTLIN
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH
NVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS
EEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHCCC
>Mature Secondary Structure 
GEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQK
CCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEECCCEEEHHHHHHHCCHHHH
AHYKSLVEIADDNVLQVIIDSLNFISNTAMNVDSKQLVVSLTDHIIFAYKRLKQNQVISN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFIALHIASNTEDLSMHEMTLIN
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH
NVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS
EEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA