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The map label for this gene is yfnB [H]

Identifier: 15926758

GI number: 15926758

Start: 1153089

End: 1153775

Strand: Direct

Name: yfnB [H]

Synonym: SA1018

Alternate gene names: 15926758

Gene position: 1153089-1153775 (Clockwise)

Preceding gene: 15926757

Following gene: 15926760

Centisome position: 40.96

GC content: 29.99

Gene sequence:

>687_bases
TTGGGATATAAAAATATTTTGATAGACTTTGATGATACAATTGTTGATTTTTATGATGCAGAAGAATGGGCGTTTCACTA
TATGGCGAATGTTTTTAATCATAAAGCAACAAAGGATGATTTTTTAACATTTAAAAAAATCAATCACCAACATTGGGAAG
CTTTTCAACAAAATAAATTAACGAAGTCTGAAGTATTATCAGAACGATTTGTGAATTACTTCAAACATCATCAAATGGAA
GTTGATGGGCATCGTGCAGATGTGTTATTTAGAAATGGATTAGCAGAAGCTAAAGTTAAATACTTTGATCAAACATTAGA
AACAATTGTCGAATTATCGAAAAGACATGATTTATATATTGTTACTAATGGTGTAACCGAAACGCAAAAGAGAAGGTTAA
ATCAGACGCCGTTGCATAAATATATTAAAAAGATATTTATATCTGAGGAAACAGGATATCAAAAACCTAATCCGGAATTT
TTTAATTATGTTTTTAATGATATTGGTGAGGATGAAAGACAGCACTCGATTATAGTTGGAGATTCTTTAACATCTGACAT
TCTAGGTGGAATCAATGCGGGTATAGCTACTTGCTGGTTTAATTTTAGAGGATTTGATCATAATCCAGGAATTATACCTG
ATTATGAAATTAATTCATGGAAACAACTAAATGATATTGTACGTTAA

Upstream 100 bases:

>100_bases
GTGAGCATACTTTAATGTTATGCACTCAGTTTATTTTATTTGCAGAAATTTGAGCCTCTGTTAAGATTTAGATACATAGA
CAATATAGGAGATGGGGAAA

Downstream 100 bases:

>100_bases
GACAAATAATTTGAAAATGATTTACTTATATTAGCTTAAGAAAGTAATTGTAAAAACGACACTACGAAAAGATGCATTTT
CATGCTCGTAGTGTCGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MGYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDFLTFKKINHQHWEAFQQNKLTKSEVLSERFVNYFKHHQME
VDGHRADVLFRNGLAEAKVKYFDQTLETIVELSKRHDLYIVTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPNPEF
FNYVFNDIGEDERQHSIIVGDSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDYEINSWKQLNDIVR

Sequences:

>Translated_228_residues
MGYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDFLTFKKINHQHWEAFQQNKLTKSEVLSERFVNYFKHHQME
VDGHRADVLFRNGLAEAKVKYFDQTLETIVELSKRHDLYIVTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPNPEF
FNYVFNDIGEDERQHSIIVGDSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDYEINSWKQLNDIVR
>Mature_227_residues
GYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDFLTFKKINHQHWEAFQQNKLTKSEVLSERFVNYFKHHQMEV
DGHRADVLFRNGLAEAKVKYFDQTLETIVELSKRHDLYIVTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPNPEFF
NYVFNDIGEDERQHSIIVGDSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDYEINSWKQLNDIVR

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=219, Percent_Identity=29.6803652968037, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26907; Mature: 26776

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDFLTFKKINHQHWEAFQQNKL
CCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCC
TKSEVLSERFVNYFKHHQMEVDGHRADVLFRNGLAEAKVKYFDQTLETIVELSKRHDLYI
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
VTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPNPEFFNYVFNDIGEDERQHSIIVG
EECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHCEEEEC
DSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDYEINSWKQLNDIVR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
GYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDFLTFKKINHQHWEAFQQNKL
CCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCC
TKSEVLSERFVNYFKHHQMEVDGHRADVLFRNGLAEAKVKYFDQTLETIVELSKRHDLYI
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
VTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPNPEFFNYVFNDIGEDERQHSIIVG
EECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHCEEEEC
DSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDYEINSWKQLNDIVR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]